; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7098 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7098
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionpentatricopeptide repeat-containing protein At1g62350
Genome locationctg1528:973105..976515
RNA-Seq ExpressionCucsat.G7098
SyntenyCucsat.G7098
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022139.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.37e-15087.75Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLR APNLLR+ S+S  S+   +RF+  TF      QQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKR+QSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDN M SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKS
        PLSLPFRVILKGL+PYPELREQVKDDFLELFPDMIVYDPPEDLFEEDED  KS
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKS

XP_004139064.1 pentatricopeptide repeat-containing protein At1g62350 isoform X1 [Cucumis sativus]2.19e-178100Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
        VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
        PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD

XP_008450338.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Cucumis melo]1.04e-17698.83Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLRLAPNLLRKISSSP+SSTPFHRFSLSTFLNLDLLQQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
        VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDN MLSEAMDIYREMRESPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
        PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD

XP_022966084.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima]9.91e-15288.14Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLR APNLLR+IS+S  S+   +RF+  TF      QQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDN M SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKS
        PLSLPFRVILKGL+PYPELREQV+DDFLELFPDMIVYDPPEDLFEEDEDR KS
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKS

XP_038878451.1 pentatricopeptide repeat-containing protein At1g62350 [Benincasa hispida]7.26e-15993.12Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLRL  NLLR+IS+S  S+TPFHRFSL TFLN DL QQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
        VAVL ELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLKKEGVLFDQHTFGDIIRAYLDN M SEAMDIYREMRESPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEED
        PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPE+LFEE+
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEED

TrEMBL top hitse value%identityAlignment
A0A1S3BQ11 pentatricopeptide repeat-containing protein At1g623505.04e-17798.83Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLRLAPNLLRKISSSP+SSTPFHRFSLSTFLNLDLLQQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
        VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDN MLSEAMDIYREMRESPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
        PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD

A0A2I4F1J6 pentatricopeptide repeat-containing protein At1g623501.77e-12372.03Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLL-----QQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRL
        MLR A NL RK S S  +  P   FS +  L L        QQ+  LR++ GSASSPSLSIWRR+KEMGKEGLIV KELKRL+ N +RLDRFI SHVSRL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLL-----QQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRL

Query:  LKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMR
        LKSDL+AVL E QRQ+ + LCMKLY+VVRKE+WYRPDM+FYRDMLMMLA+NK+V+E KQVWEDLKKE VLFDQHTFGDIIRA+LDN + SEAMDIY EMR
Subjt:  LKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMR

Query:  ESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
         SPD P+SLPFRVILKGL+PYPELRE++KDDFLELFPDM+VYDPPEDLFE ++ R K  DD
Subjt:  ESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD

A0A6J1DGX4 pentatricopeptide repeat-containing protein At1g623509.50e-14884.82Show/hide
Query:  MLRLAPNLLRKISS--SPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKS
        MLRL PNLLR+  +  +  ++ PFH  S  TF + D LQQQ L RFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKS
Subjt:  MLRLAPNLLRKISS--SPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKS

Query:  DLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESP
        DLVAVLVELQRQ  VFLCMKLYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVW+DLK+E VLFDQHTFGDIIRAYLDN M SEAMDIYREMR+SP
Subjt:  DLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESP

Query:  DRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSED
        DRPLSLPFRVILKGLIPYPELREQ+KDDFLELFPDMIVYDPPEDLFEEDEDR +  D
Subjt:  DRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSED

A0A6J1EQI1 pentatricopeptide repeat-containing protein At1g623501.87e-14986.96Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLR APNLLR+ S+S  S+   +R +  TF      QQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKR+QSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDN M SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKS
        PLSLPFRVILKGL+PYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE   KS
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKS

A0A6J1HQL7 pentatricopeptide repeat-containing protein At1g623504.80e-15288.14Show/hide
Query:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLR APNLLR+IS+S  S+   +RF+  TF      QQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDN M SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKS
        PLSLPFRVILKGL+PYPELREQV+DDFLELFPDMIVYDPPEDLFEEDEDR KS
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKS

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623504.5e-8276.29Show/hide
Query:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE
        M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQN VFLCMKLY VVR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VWEDLKKE
Subjt:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE

Query:  GVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
         VLFDQHTFGD++R +LDN +  EAM +Y EMRESPDRPLSLPFRVILKGL+PYPELRE+VKDDFLELFP MIVYDPPED+ E+ ++  +++ D
Subjt:  GVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic3.8e-0419.19Show/hide
Query:  MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPD-RPLSLPFRVILKGLI
        ++++ ++R+++WY+P++  Y  +++ML K K+ E+  ++++++  EG + +   +  ++ AY  +     A  +   M+ S + +P    + +++K  +
Subjt:  MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPD-RPLSLPFRVILKGLI

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic2.6e-0527.94Show/hide
Query:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKK
        +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ++  L + + + +R E  Y P D+  Y D++  L +NK  +E  ++  ++  
Subjt:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKK

Query:  EGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRES
             D      +IRA +        + +Y  MRES
Subjt:  EGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRES

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.2e-5047.52Show/hide
Query:  RFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMM
        RF  G    P   +WR KK +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ    L +K++ V++K+ WY+PD+F Y+D+++ 
Subjt:  RFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMM

Query:  LAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPED
        LAK+KR++E   +WE +KKE +  D  T+ ++IR +L +   ++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +VK DF ELFP+   YDPPE+
Subjt:  LAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPED

Query:  LF
        +F
Subjt:  LF

Q9ZVX5 Pentatricopeptide repeat-containing protein At2g168807.6e-0525.89Show/hide
Query:  PDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELRE--QVKDDF-
        PD   Y  +L  ++K  R+ + K++  D+KK G++ ++ T+ +++  Y     L EA  I   M+++   P    + +++ GL     +RE  ++ D   
Subjt:  PDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELRE--QVKDDF-

Query:  -LELFPDMIVYD
         L+L PD++ Y+
Subjt:  -LELFPDMIVYD

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-8376.29Show/hide
Query:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE
        M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQN VFLCMKLY VVR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VWEDLKKE
Subjt:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE

Query:  GVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD
         VLFDQHTFGD++R +LDN +  EAM +Y EMRESPDRPLSLPFRVILKGL+PYPELRE+VKDDFLELFP MIVYDPPED+ E+ ++  +++ D
Subjt:  GVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.8e-0627.94Show/hide
Query:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKK
        +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ++  L + + + +R E  Y P D+  Y D++  L +NK  +E  ++  ++  
Subjt:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKK

Query:  EGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRES
             D      +IRA +        + +Y  MRES
Subjt:  EGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRES

AT3G42570.1 peroxidase family protein8.3e-0773.53Show/hide
Query:  KKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVS
        KKE  KEGLI  KELKRLQ+N +RLDRFI SH S
Subjt:  KKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVS

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein8.5e-5247.52Show/hide
Query:  RFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMM
        RF  G    P   +WR KK +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ    L +K++ V++K+ WY+PD+F Y+D+++ 
Subjt:  RFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMM

Query:  LAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPED
        LAK+KR++E   +WE +KKE +  D  T+ ++IR +L +   ++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +VK DF ELFP+   YDPPE+
Subjt:  LAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPED

Query:  LF
        +F
Subjt:  LF

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain4.0e-1729.36Show/hide
Query:  LDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKR---------------LQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCM
        + +LQ+ ++++    S +   L   +R + +  E +  V+ LKR                 S+   LDR I S   RLLK D+VAVL EL RQN   L +
Subjt:  LDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKR---------------LQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCM

Query:  KLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE-GVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPY
        K++  +RKE WY+P +  Y DM+ ++A N  +EE   ++  +K E G++ +   F  ++   L++ +    MD Y  M+     P    FRV++ GL   
Subjt:  KLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE-GVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPY

Query:  PE--LREQVKDDFLELFPDMIVYDPPEDLFEEDED
         E  L   V+ D  E + + +      +  EEDE+
Subjt:  PE--LREQVKDDFLELFPDMIVYDPPEDLFEEDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGTCTTGCTCCAAATCTTCTTCGCAAAATCTCAAGCAGCCCCATTTCCTCAACCCCTTTCCATCGTTTTTCCCTTTCCACATTTCTCAACCTCGATCTGTTACA
GCAACAATTGCTGTTACGCTTCATCACTGGCTCTGCTTCCAGCCCTAGCCTCTCAATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTGATTGTAGTCAAAGAAC
TCAAGAGACTTCAGTCCAATTTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGACCTTGTTGCGGTTCTTGTTGAGCTTCAGAGACAG
AATCATGTCTTTCTCTGCATGAAGTTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGGCCCGACATGTTCTTTTATAGAGATATGCTTATGATGCTTGCAAAGAACAA
AAGGGTAGAGGAAACAAAACAAGTATGGGAGGATCTGAAAAAAGAGGGAGTGTTATTTGATCAGCATACTTTTGGAGACATTATTCGAGCATACTTGGATAATACAATGC
TCTCTGAGGCCATGGATATATATCGTGAAATGAGAGAATCTCCTGATAGGCCCTTATCTTTGCCTTTTCGTGTCATTCTTAAGGGCCTTATTCCATATCCAGAATTGAGA
GAACAAGTTAAAGATGACTTCTTGGAGCTCTTCCCTGATATGATCGTCTACGATCCACCAGAAGACTTGTTTGAAGAAGATGAAGATAGAAACAAGAGTGAAGATGATTA
A
mRNA sequenceShow/hide mRNA sequence
ATGCTTCGTCTTGCTCCAAATCTTCTTCGCAAAATCTCAAGCAGCCCCATTTCCTCAACCCCTTTCCATCGTTTTTCCCTTTCCACATTTCTCAACCTCGATCTGTTACA
GCAACAATTGCTGTTACGCTTCATCACTGGCTCTGCTTCCAGCCCTAGCCTCTCAATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTGATTGTAGTCAAAGAAC
TCAAGAGACTTCAGTCCAATTTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGACCTTGTTGCGGTTCTTGTTGAGCTTCAGAGACAG
AATCATGTCTTTCTCTGCATGAAGTTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGGCCCGACATGTTCTTTTATAGAGATATGCTTATGATGCTTGCAAAGAACAA
AAGGGTAGAGGAAACAAAACAAGTATGGGAGGATCTGAAAAAAGAGGGAGTGTTATTTGATCAGCATACTTTTGGAGACATTATTCGAGCATACTTGGATAATACAATGC
TCTCTGAGGCCATGGATATATATCGTGAAATGAGAGAATCTCCTGATAGGCCCTTATCTTTGCCTTTTCGTGTCATTCTTAAGGGCCTTATTCCATATCCAGAATTGAGA
GAACAAGTTAAAGATGACTTCTTGGAGCTCTTCCCTGATATGATCGTCTACGATCCACCAGAAGACTTGTTTGAAGAAGATGAAGATAGAAACAAGAGTGAAGATGATTA
A
Protein sequenceShow/hide protein sequence
MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQ
NHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELR
EQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD