; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7128 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7128
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Genome locationctg1528:1949797..1952252
RNA-Seq ExpressionCucsat.G7128
SyntenyCucsat.G7128
Gene Ontology termsGO:1900865 - chloroplast RNA modification (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588176.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.53e-11679.82Show/hide
Query:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI
        M+R DF      LL  CKS  QIKQ HA+LITTGL+LHPI TNKLLK LS S FA ISYA MVFDHFPQPDLFLYNTIIK  A S TSSADSFT+FRSLI
Subjt:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI

Query:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE
        R+ RLVPNQYSFAFAFKGCG+ VGVLEGEQVR HA+KLGLENNLFV NALIGMYVNL  V DARKVFDWS  RDMYSWNIMLSGYA+LGKMD+AR+LFDE
Subjt:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE

Query:  MPEKDVVSWTTMISGCLQ
        MPE+DVVSWTTMI+GC+Q
Subjt:  MPEKDVVSWTTMISGCLQ

XP_004139110.1 pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus]1.97e-14499.53Show/hide
Query:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP
        MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP
Subjt:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISGCLQL
        SWTTMISGCLQ+
Subjt:  SWTTMISGCLQL

XP_008450449.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis melo]1.08e-13895.28Show/hide
Query:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP
        MVRCDFLL SCKSFRQIKQVHA+LIT+GLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIREERLVP
Subjt:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        NQYSFAFAFK CGSGVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVVDARKVF+WSP RDMYSWNIMLSGYARLGKMDEARQLFDEMPE+DVV
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISGCLQL
        SWTTMISGCLQ+
Subjt:  SWTTMISGCLQL

XP_023529533.1 pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp. pepo]1.69e-11179.91Show/hide
Query:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI
        M+R DF      LL  CKS  QIKQ HA+LITTGL+LHPI TNKLLK LS S FA ISYA MVFDHFPQPDLFLYNTIIK  A S TSSADSFT+FRSLI
Subjt:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI

Query:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE
        R+ RLVPNQYSFAFAFKGCG+ VGVLEGEQVRVHA+KLGLENNLFV NALIGMYVNL FV  ARKVFDWS  RDMYSWNIMLSGYA+LGKMD+AR+LFDE
Subjt:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE

Query:  MPEKDVVSWTTMISGCLQL
        MPE+DVVSWTTMI+GC+Q+
Subjt:  MPEKDVVSWTTMISGCLQL

XP_038878435.1 pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida]1.93e-12787.67Show/hide
Query:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSI-FAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI
        M+RCDF      LL SCKS  QIKQVHA+LITTGLI+HPIPTNKLLK +SS  FAPISYAHMVFDH PQPDLFLYNTIIK LA STTSSADSFT+FRSLI
Subjt:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSI-FAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI

Query:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE
        REERLVPNQYSFAF FKGCG+GVGVLEGEQVRVHA+KLGLENNLFV NALIGMYVNL FVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE
Subjt:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE

Query:  MPEKDVVSWTTMISGCLQL
        MPE+DVVSWTTMISGCLQ+
Subjt:  MPEKDVVSWTTMISGCLQL

TrEMBL top hitse value%identityAlignment
A0A0A0LX83 DYW_deaminase domain-containing protein9.56e-14599.53Show/hide
Query:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP
        MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP
Subjt:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISGCLQL
        SWTTMISGCLQ+
Subjt:  SWTTMISGCLQL

A0A1S3BNM1 pentatricopeptide repeat-containing protein At5g66520-like5.25e-13995.28Show/hide
Query:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP
        MVRCDFLL SCKSFRQIKQVHA+LIT+GLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIREERLVP
Subjt:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        NQYSFAFAFK CGSGVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVVDARKVF+WSP RDMYSWNIMLSGYARLGKMDEARQLFDEMPE+DVV
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISGCLQL
        SWTTMISGCLQ+
Subjt:  SWTTMISGCLQL

A0A5A7UA76 Pentatricopeptide repeat-containing protein8.76e-10095.57Show/hide
Query:  MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVV
        MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIREERLVPNQYSFAFAFK CGSGVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVV
Subjt:  MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVV

Query:  DARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQL
        DARKVF+WSP RDMYSWNIMLSGYARLGKMDEARQLFDEMPE+DVVSWTTMISGCLQ+
Subjt:  DARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQL

A0A6J1EIF4 pentatricopeptide repeat-containing protein At3g62890-like1.64e-11179.45Show/hide
Query:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI
        M+R DF      LL  CKS  QIKQ HA+LITTGL+LHPI TNKLLK LS S FA ISYA MVFDHFPQPDLFLYNTIIK  A S TSSADSFT+FRSLI
Subjt:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI

Query:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE
        R+ RLVPNQYSFAFAFKGCG+ VGVLEGEQVR HA+KLGLENNLFV NALIGMYVNL  V DARKVFDWS  RDMYSWNIMLSGYA+LGKMD+AR+LFDE
Subjt:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE

Query:  MPEKDVVSWTTMISGCLQL
        MPE+DVVSWTTMI+GC+Q+
Subjt:  MPEKDVVSWTTMISGCLQL

A0A6J1HU41 pentatricopeptide repeat-containing protein At5g66520-like1.16e-11179.45Show/hide
Query:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI
        M+R DF      LL  CKS  QIKQ HA+LITTGL+LHPI TNKLLK LS S F  ISYA MVFDHFPQPDLFLYNTIIK  A S TSSADSFT+FRSLI
Subjt:  MVRCDF------LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI

Query:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE
        R+  LVPNQYSFAFAFKGCG+ VGVLEGEQVRVHA+KLGLENNLFV NALIGMYVNL FV DARKVFDWS  RDMYSWNIMLSGYA+LGKMD+AR+LFDE
Subjt:  REERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE

Query:  MPEKDVVSWTTMISGCLQL
        MPE+DVVSWTTMI+GC+Q+
Subjt:  MPEKDVVSWTTMISGCLQL

SwissProt top hitse value%identityAlignment
O49399 Pentatricopeptide repeat-containing protein At4g188401.4e-3139.2Show/hide
Query:  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAF
        KS  +I+Q HA ++ TGL       +KL+   ++   P  +SYAH + +    P+ F +N++I+  A S+T    + T FR ++    + P++YSF F  
Subjt:  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAF

Query:  KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISG
        K C +  G  EG Q+    IK GL  ++FV N L+ +Y    +   ARKV D  P RD  SWN +LS Y   G +DEAR LFDEM E++V SW  MISG
Subjt:  KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISG

Q9FG16 Pentatricopeptide repeat-containing protein At5g065402.9e-2932.69Show/hide
Query:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP
        LL SC SF  +K +H  L+ T LI      ++LL      S+   P   + YA+ +F     P+LF++N +I+   FST +       F + + + R+ P
Subjt:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        +  +F F  K       VL GEQ     ++ G +N+++V N+L+ MY N  F+  A ++F     RD+ SW  M++GY + G ++ AR++FDEMP +++ 
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISG
        +W+ MI+G
Subjt:  SWTTMISG

Q9FJY7 Pentatricopeptide repeat-containing protein At5g665203.8e-2937.09Show/hide
Query:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLV----
        L  C    ++KQ+HAR++ TGL+       K L       SS F P  YA +VFD F +PD FL+N +I+   FS +   +     RSL+  +R++    
Subjt:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLV----

Query:  -PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKD
          N Y+F    K C +     E  Q+     KLG EN+++  N+LI  Y        A  +FD  P  D  SWN ++ GY + GKMD A  LF +M EK+
Subjt:  -PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKD

Query:  VVSWTTMISGCLQ
         +SWTTMISG +Q
Subjt:  VVSWTTMISGCLQ

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic1.5e-3339.22Show/hide
Query:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYS
        LL +CK+ + ++ +HA++I  GL       +KL++   LS  F  + YA  VF    +P+L ++NT+ +  A S  S   S  K    +    L+PN Y+
Subjt:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYS

Query:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT
        F F  K C       EG+Q+  H +KLG + +L+V  +LI MYV    + DA KVFD SP+RD+ S+  ++ GYA  G ++ A++LFDE+P KDVVSW  
Subjt:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT

Query:  MISG
        MISG
Subjt:  MISG

Q9SIL5 Pentatricopeptide repeat-containing protein At2g205402.4e-3138.31Show/hide
Query:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAF
        L   KS  + K+++A +I  GL        K++     I   + YA  +F+    P++FLYN+II+    ++    D    ++ L+R+   +P++++F F
Subjt:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAF

Query:  AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS
         FK C S      G+QV  H  K G   ++   NALI MY+  D +VDA KVFD    RD+ SWN +LSGYARLG+M +A+ LF  M +K +VSWT MIS
Subjt:  AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS

Query:  G
        G
Subjt:  G

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-3439.22Show/hide
Query:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYS
        LL +CK+ + ++ +HA++I  GL       +KL++   LS  F  + YA  VF    +P+L ++NT+ +  A S  S   S  K    +    L+PN Y+
Subjt:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYS

Query:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT
        F F  K C       EG+Q+  H +KLG + +L+V  +LI MYV    + DA KVFD SP+RD+ S+  ++ GYA  G ++ A++LFDE+P KDVVSW  
Subjt:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT

Query:  MISG
        MISG
Subjt:  MISG

AT2G20540.1 mitochondrial editing factor 211.7e-3238.31Show/hide
Query:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAF
        L   KS  + K+++A +I  GL        K++     I   + YA  +F+    P++FLYN+II+    ++    D    ++ L+R+   +P++++F F
Subjt:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAF

Query:  AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS
         FK C S      G+QV  H  K G   ++   NALI MY+  D +VDA KVFD    RD+ SWN +LSGYARLG+M +A+ LF  M +K +VSWT MIS
Subjt:  AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS

Query:  G
        G
Subjt:  G

AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.0e-3239.2Show/hide
Query:  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAF
        KS  +I+Q HA ++ TGL       +KL+   ++   P  +SYAH + +    P+ F +N++I+  A S+T    + T FR ++    + P++YSF F  
Subjt:  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAF

Query:  KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISG
        K C +  G  EG Q+    IK GL  ++FV N L+ +Y    +   ARKV D  P RD  SWN +LS Y   G +DEAR LFDEM E++V SW  MISG
Subjt:  KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISG

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-3032.69Show/hide
Query:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP
        LL SC SF  +K +H  L+ T LI      ++LL      S+   P   + YA+ +F     P+LF++N +I+   FST +       F + + + R+ P
Subjt:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        +  +F F  K       VL GEQ     ++ G +N+++V N+L+ MY N  F+  A ++F     RD+ SW  M++GY + G ++ AR++FDEMP +++ 
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISG
        +W+ MI+G
Subjt:  SWTTMISG

AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.7e-3037.09Show/hide
Query:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLV----
        L  C    ++KQ+HAR++ TGL+       K L       SS F P  YA +VFD F +PD FL+N +I+   FS +   +     RSL+  +R++    
Subjt:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLV----

Query:  -PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKD
          N Y+F    K C +     E  Q+     KLG EN+++  N+LI  Y        A  +FD  P  D  SWN ++ GY + GKMD A  LF +M EK+
Subjt:  -PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKD

Query:  VVSWTTMISGCLQ
         +SWTTMISG +Q
Subjt:  VVSWTTMISGCLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGATGCGACTTTTTACTCAGTTCCTGCAAATCATTTCGCCAAATCAAACAAGTTCACGCCCGATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACTAA
TAAACTCCTTAAACAACTTTCCTCAATATTCGCTCCAATTTCCTATGCCCACATGGTGTTCGACCATTTTCCTCAACCAGATCTCTTCCTCTACAACACCATTATCAAGG
TCCTGGCATTTTCAACCACTTCTTCTGCTGATTCTTTCACGAAGTTTCGTTCTTTAATCCGCGAAGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTTGCCTTCAAG
GGCTGTGGCAGTGGTGTTGGGGTTCTGGAAGGGGAGCAAGTTCGTGTTCATGCTATTAAACTTGGTCTGGAAAACAATCTGTTTGTGACGAATGCGTTGATTGGGATGTA
TGTGAATTTGGATTTTGTTGTGGATGCTAGAAAGGTGTTTGATTGGAGTCCCAATAGAGATATGTATTCCTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAAAA
TGGATGAAGCTCGGCAACTGTTTGATGAAATGCCTGAAAAAGATGTTGTGTCGTGGACAACAATGATTTCTGGTTGTCTTCAGTTACTTCTTGACACAGTAATACTGTGC
TGGTATACGCTATGCCATAGTGAGAAGCCATATTTACTTTCTTTGCGAGAGAGAAGTATTTTTCTGTCTCGTTTCCTCAAACTTGCCCCTGCATCCATGGGGAAATCAAA
TGGTTGGTTATTTCATGGAAGCTTTGGATATCTTCCACAACATGCTGGCAAAAGGGATGAGCCCAAACGAGTACACATTAGCCAGTTCCCTTGCTGCCTGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTACGATGCGACTTTTTACTCAGTTCCTGCAAATCATTTCGCCAAATCAAACAAGTTCACGCCCGATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACTAA
TAAACTCCTTAAACAACTTTCCTCAATATTCGCTCCAATTTCCTATGCCCACATGGTGTTCGACCATTTTCCTCAACCAGATCTCTTCCTCTACAACACCATTATCAAGG
TCCTGGCATTTTCAACCACTTCTTCTGCTGATTCTTTCACGAAGTTTCGTTCTTTAATCCGCGAAGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTTGCCTTCAAG
GGCTGTGGCAGTGGTGTTGGGGTTCTGGAAGGGGAGCAAGTTCGTGTTCATGCTATTAAACTTGGTCTGGAAAACAATCTGTTTGTGACGAATGCGTTGATTGGGATGTA
TGTGAATTTGGATTTTGTTGTGGATGCTAGAAAGGTGTTTGATTGGAGTCCCAATAGAGATATGTATTCCTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAAAA
TGGATGAAGCTCGGCAACTGTTTGATGAAATGCCTGAAAAAGATGTTGTGTCGTGGACAACAATGATTTCTGGTTGTCTTCAGTTACTTCTTGACACAGTAATACTGTGC
TGGTATACGCTATGCCATAGTGAGAAGCCATATTTACTTTCTTTGCGAGAGAGAAGTATTTTTCTGTCTCGTTTCCTCAAACTTGCCCCTGCATCCATGGGGAAATCAAA
TGGTTGGTTATTTCATGGAAGCTTTGGATATCTTCCACAACATGCTGGCAAAAGGGATGAGCCCAAACGAGTACACATTAGCCAGTTCCCTTGCTGCCTGTGCTAA
Protein sequenceShow/hide protein sequence
MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFK
GCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQLLLDTVILC
WYTLCHSEKPYLLSLRERSIFLSRFLKLAPASMGKSNGWLFHGSFGYLPQHAGKRDEPKRVHISQFPCCLC