CuGenDBv2

Gene ID	Cucsat.G721
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Beta-galactosidase
Genome location	ctg1:112654..113122
RNA-Seq Expression	Cucsat.G721
Synteny	Cucsat.G721
Gene Ontology terms	GO:0009987 - cellular process (biological process) GO:0005515 - protein binding (molecular function) GO:0097159 - organic cyclic compound binding (molecular function) GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0057585.1 Beta-galactosidase [Cucumis melo var. makuwa]

7.11e-64

67.95

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+A+ +  TPTIDSAAFSARSSN  SDK+NGK IP+CEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P SFGL+S+DGKNPWILDSGATDHLTGSS+HF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

TYJ97685.1 Beta-galactosidase [Cucumis melo var. makuwa]

7.44e-64

69.23

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+AM +  TPTIDSAAFSARSSN  SDK+NGK IPVCEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P S GL+S+DGKNPWILDSGATDHLTGSSEHF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

TYK11735.1 Beta-galactosidase [Cucumis melo var. makuwa]

7.44e-64

69.23

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+AM +  TPTIDSAAFSARSSN  SDK+NGK IPVCEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P S GL+S+DGKNPWILDSGATDHLTGSSEHF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

TYK13763.1 Beta-galactosidase [Cucumis melo var. makuwa]

7.24e-64

69.23

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+AM +  TPTIDSAAFSARSSN  SDK+NGK IPVCEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P S GL+S+DGKNPWILDSGATDHLTGSSEHF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

TYK31682.1 Beta-galactosidase [Cucumis melo var. makuwa]

7.44e-64

69.23

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+AM +  TPTIDSAAFSARSSN  SDK+NGK IPVCEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P S GL+S+DGKNPWILDSGATDHLTGSSEHF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UVJ5 Beta-galactosidase

3.44e-64

67.95

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+A+ +  TPTIDSAAFSARSSN  SDK+NGK IP+CEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P SFGL+S+DGKNPWILDSGATDHLTGSS+HF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

A0A5D3BGT3 Beta-galactosidase

3.60e-64

69.23

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+AM +  TPTIDSAAFSARSSN  SDK+NGK IPVCEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P S GL+S+DGKNPWILDSGATDHLTGSSEHF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

A0A5D3CJM2 Beta-galactosidase

3.60e-64

69.23

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+AM +  TPTIDSAAFSARSSN  SDK+NGK IPVCEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P S GL+S+DGKNPWILDSGATDHLTGSSEHF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

A0A5D3CPE0 Beta-galactosidase

3.50e-64

69.23

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+AM +  TPTIDSAAFSARSSN  SDK+NGK IPVCEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P S GL+S+DGKNPWILDSGATDHLTGSSEHF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

A0A5D3E6Y2 Beta-galactosidase

3.60e-64

69.23

Show/hide

Query:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------
        RT+AM +  TPTIDSAAFSARSSN  SDK+NGK IPVCEHCKKQWHTK+QCWKLHGRPPG KKR SN+KQN+GRAY+S                      
Subjt:  RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVS----------------------

Query:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA
          AI QSG+P S GL+S+DGKNPWILDSGATDHLTGSSEHF+SY PCAGNE IRIA
Subjt:  --AIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGSSEHFVSYIPCAGNETIRIA

SwissProt top hits

e value

%identity

Alignment

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

5.6e-04

27.73

Show/hide

Query:  SAAFSARSSNSSSDKHNGKP-IPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVSAIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGS
        S ++   SS S SD    KP +  C+ C  Q H+ ++C +LH     + ++ S       +   +  V S  P++         N W+LDSGAT H+T  
Subjt:  SAAFSARSSNSSSDKHNGKP-IPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVSAIVQSGIPHSFGLVSIDGKNPWILDSGATDHLTGS

Query:  SEHFVSYIPCAGNETIRIA
          +   + P  G + + IA
Subjt:  SEHFVSYIPCAGNETIRIA

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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CGCACAAGTGCTATGAATATTTCCGCAACCCCTACTATTGACTCTGCTGCTTTTAGTGCAAGATCTTCTAACAGTAGCAGTGACAAGCATAATGGAAAACCAATTCCTGT
CTGTGAGCATTGCAAAAAACAATGGCATACCAAAGAACAATGTTGGAAGTTACATGGTCGTCCCCCAGGAAGTAAGAAACGCCCTTCCAATGACAAACAGAACACAGGGC
GGGCGTATGTGAGTGCCATTGTCCAATCAGGTATACCTCATTCCTTCGGTCTTGTTAGTATTGATGGGAAGAACCCCTGGATTCTGGACTCTGGTGCCACAGATCATTTG
ACTGGGTCCTCTGAACATTTTGTATCTTACATTCCTTGTGCTGGGAACGAGACAATTAGAATTGCA

mRNA sequence

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Protein sequence

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RTSAMNISATPTIDSAAFSARSSNSSSDKHNGKPIPVCEHCKKQWHTKEQCWKLHGRPPGSKKRPSNDKQNTGRAYVSAIVQSGIPHSFGLVSIDGKNPWILDSGATDHL
TGSSEHFVSYIPCAGNETIRIA

Cucsat.G721 (gene) of Cucumber (B10) v3 genome