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Cucsat.G7283 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7283
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionER membrane protein complex subunit 6
Genome locationctg1528:5011891..5016780
RNA-Seq ExpressionCucsat.G7283
SyntenyCucsat.G7283
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0006996 - organelle organization (biological process)
GO:0072546 - ER membrane protein complex (cellular component)
InterPro domainsIPR008504 - ER membrane protein complex subunit 6
IPR029008 - Rab5-interacting protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597582.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]3.72e-6181.89Show/hide
Query:  LPFSGLLTSDHTAAEFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFH
        LP     ++D T  E MAGYSS AS+KKSSD  DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSFH
Subjt:  LPFSGLLTSDHTAAEFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFH

Query:  SYFESCNQILFDGFLSGLMSFVLFWTY
        SYFES NQIL DGFLSGLMSFVLFWT+
Subjt:  SYFESCNQILFDGFLSGLMSFVLFWTY

XP_004135605.1 ER membrane protein complex subunit 6 [Cucumis sativus]3.70e-6799.1Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

XP_008450632.1 PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo]1.43e-6495.5Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL 
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

XP_022137968.1 ER membrane protein complex subunit 6 [Momordica charantia]4.28e-5988.29Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKS++ ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFI YFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

XP_038880512.1 ER membrane protein complex subunit 6 [Benincasa hispida]1.96e-6077.94Show/hide
Query:  PAPLHLPFSGLLTSDH----TAAEFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVAL
        P  L L +  LL  ++    TAAE  AGYSST S+KKSSD ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGL GFIFYF+VMAITS+AL
Subjt:  PAPLHLPFSGLLTSDH----TAAEFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVAL

Query:  AAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        A KAGFSF SYFES NQIL DGFLSGLMSFVLFWT+
Subjt:  AAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

TrEMBL top hitse value%identityAlignment
A0A0A0LZ06 ER membrane protein complex subunit 61.01e-6698.25Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTYPLH
        GLMSFVLFWT P H
Subjt:  GLMSFVLFWTYPLH

A0A1S3BQB0 ER membrane protein complex subunit 66.92e-6595.5Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL 
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

A0A6J1CBS9 ER membrane protein complex subunit 62.07e-5988.29Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKS++ ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFI YFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

A0A6J1FFH8 ER membrane protein complex subunit 62.07e-5989.19Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKSSD  DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

A0A6J1I7D9 ER membrane protein complex subunit 64.17e-5988.29Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKSSD  DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

SwissProt top hitse value%identityAlignment
Q3ZCG8 ER membrane protein complex subunit 61.5e-1038.46Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        P  +   ++ N  ++ Y RT +S + G  AG+LG TGL GFIFY L   + S+ L  KA   ++ YF+S   +   G + GL ++VLFWT+
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Q68EU8 ER membrane protein complex subunit 61.2e-1040.48Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        ++ N  ++ Y RT +S + G  AG+LG T L GFIFYFL   + S+ L  K+G  ++ YF+S   +   G + GL ++VLFWT+
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Q6GLC5 ER membrane protein complex subunit 69.0e-1140.48Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        ++ N  ++ Y RT +S + G  AG+LG T L GFIFYFL   + S+ L  K+G  ++ YF+S   +   G + GL ++VLFWT+
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Q9BV81 ER membrane protein complex subunit 61.4e-1139.56Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        P  +   ++ N  ++ Y RT +S + G  AG+LG TGL GFIFY L   + S+ L  KAG  ++ YF+S   +   G + GL ++VLFWT+
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Q9CQW0 ER membrane protein complex subunit 61.4e-1139.56Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        P  +   ++ N  ++ Y RT +S + G  AG+LG TGL GFIFY L   + S+ L  KAG  ++ YF+S   +   G + GL ++VLFWT+
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Arabidopsis top hitse value%identityAlignment
AT5G49540.1 Rab5-interacting family protein1.2e-3469.23Show/hide
Query:  ASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVL
        +S+K+S D+  DIP F+AENLQNNLK+I  SRTFLSII GV+AG++GF GL GF+FYF+VM ITSV L AKAGFS   YF+S N++LFDGFL GLMSFVL
Subjt:  ASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVL

Query:  FWTY
        FWT+
Subjt:  FWTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACTTTGGTTCTTTCTTCAACACTCTTCTTTTTGTGATTTCTCCAGTCTACCATTTAACACACCACAAATCGCGTCCTGATTTCGTTCTTCTCCCTCTCCATCACTGCCA
TTTTCCCTCGCCGGCTCCCCTCCATCTTCCGTTTTCCGGTCTTTTAACTTCAGATCATACGGCGGCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAAT
CGTCTGATTTGGCCGACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATCATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATT
GCTGGAGTTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATA
TTTTGAAAGCTGTAACCAGATTCTATTCGATGGCTTTCTCAGTGGACTTATGTCGTTCGTGCTTTTCTGGACGTATCCTTTACATAACTTTATGGTTTATACAAAGTATT
TTTTGCCTTTTATTTCAAATACATAA
mRNA sequenceShow/hide mRNA sequence
CACTTTGGTTCTTTCTTCAACACTCTTCTTTTTGTGATTTCTCCAGTCTACCATTTAACACACCACAAATCGCGTCCTGATTTCGTTCTTCTCCCTCTCCATCACTGCCA
TTTTCCCTCGCCGGCTCCCCTCCATCTTCCGTTTTCCGGTCTTTTAACTTCAGATCATACGGCGGCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAAT
CGTCTGATTTGGCCGACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATCATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATT
GCTGGAGTTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATA
TTTTGAAAGCTGTAACCAGATTCTATTCGATGGCTTTCTCAGTGGACTTATGTCGTTCGTGCTTTTCTGGACGTATCCTTTACATAACTTTATGGTTTATACAAAGTATT
TTTTGCCTTTTATTTCAAATACATAA
Protein sequenceShow/hide protein sequence
HFGSFFNTLLFVISPVYHLTHHKSRPDFVLLPLHHCHFPSPAPLHLPFSGLLTSDHTAAEFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVI
AGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTYPLHNFMVYTKYFLPFISNT