CuGenDBv2

Gene ID	Cucsat.G7293
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	serine/arginine-rich splicing factor 11
Genome location	ctg1528:5099328..5102460
RNA-Seq Expression	Cucsat.G7293
Synteny	Cucsat.G7293
Gene Ontology terms	GO:0016020 - membrane (cellular component) GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

3.93e-89

95.05

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TSNSSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDY+RS   SESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

XP_011659818.1 NKAP family protein isoform X2 [Cucumis sativus]

2.35e-94

99.44

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKERE
        MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSRSSESEPETSSRSKRHKKNDRTKKDKERE
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKERE

Query:  RSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        RSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
Subjt:  RSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

3.36e-81

90.16

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+YSRS   S+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]

2.41e-92

98.34

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR--SSESEPETSSRSKRHKKNDRTKKDKE
        MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSR  SSESEPETSSRSKRHKKNDRTKKDKE
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR--SSESEPETSSRSKRHKKNDRTKKDKE

Query:  RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
Subjt:  RERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

2.07e-84

90.66

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR---SSESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR+ RR+KDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR   SS+SEPETS RSKRHK+NDR K+DK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR---SSESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ3 Uncharacterized protein

1.14e-94

99.44

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKERE
        MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSRSSESEPETSSRSKRHKKNDRTKKDKERE
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKERE

Query:  RSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        RSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
Subjt:  RSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

1.90e-89

95.05

Show/hide

Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TSNSSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDY+RS   SESEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

1.63e-81

90.16

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+YSRS   S+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

4.00e-72

86.34

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+A+  +SDSSSSSSRRRRRR+TRR+KDRD LRIRKKSRSHSKR RRHRRSSS+SLSSSDSESDYSRS   S+SEPE S RSKRHKKND TKK  
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        ERERS+S HHKRRKHKAKEKQPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

A0A6J1I4D4 NKAP family protein isoform X2

2.23e-71

85.79

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Query:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK
        MAA+SS+A+  +SDSSSSSSRRRRRR+TRR+KDRD LRIRKKSRSHSKR RRHRRSSS+SLSSSDSESDYSRS   S+SEPE S RSKRHKKND TKK  
Subjt:  MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRS---SESEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
         RERS+S HHKRRKHKAKEKQPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

1.2e-33

62.64

Show/hide

Query:  MAATSSAATSNSSDSSSSSSRRR--RRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKE
        MAA+SS+++S+ S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+ RR R+ SSDS  SS S+S  S SS+SE E   +S+RHKK+++ KK K+
Subjt:  MAATSSAATSNSSDSSSSSSRRR--RRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKE

Query:  RERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        +ERS+SH HKR K++ ++K + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  RERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

AT5G27860.2 unknown protein

1.2e-33

62.64

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Query:  MAATSSAATSNSSDSSSSSSRRR--RRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKE
        MAA+SS+++S+ S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+ RR R+ SSDS  SS S+S  S SS+SE E   +S+RHKK+++ KK K+
Subjt:  MAATSSAATSNSSDSSSSSSRRR--RRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKE

Query:  RERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD
        +ERS+SH HKR K++ ++K + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  RERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

Sequences

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CDS sequence

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ATGGCGGCCACATCTTCGGCTGCGACATCCAATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAAAACTCGTCGTGATAAAGATCGGGACACGCT
TAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGTAGGCACCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCCGACTCCGAATCTGATTACTCCCGCTCTT
CTGAAAGTGAGCCTGAAACATCAAGCCGCTCAAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCATAAAAGGCGT
AAACATAAAGCTAAAGAGAAACAACCAGAGGAGAGTAGTAGCCCTGTGCAGCTGTCCAAGTTTTTAGCACGGGAGAAGGATGATGGTACACGGCGAAGTGCCGTCTCTGG
CAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAACCAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

mRNA sequence

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Protein sequence

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MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRR
KHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSSFD

Cucsat.G7293 (gene) of Cucumber (B10) v3 genome