; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7384 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7384
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationctg1528:730519..732424
RNA-Seq ExpressionCucsat.G7384
SyntenyCucsat.G7384
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139075.1 chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus]8.69e-198100Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_008450298.1 PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo]2.79e-19497.8Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGA+PSFGSSRKSASFVVRA ATPPVKQGADRQLWFASKQSL+YLDGSLPGDFGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_022153224.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Momordica charantia]6.05e-18994.14Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAAR R GARPSFGSSRKSASFVVRAEATPPVKQGA+RQLWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGR+AMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_022933380.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata]5.38e-19096.35Show/hide
Query:  MATQALVSSS-LTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALVSSS LTSSVGAARQRLG +PS GSSRK+ASFVVRAEATPPVKQGA+RQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSS-LTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_038879830.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida]3.40e-19597.44Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGA+PSFGSSRK+ASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

TrEMBL top hitse value%identityAlignment
A0A0A0LXV0 Chlorophyll a-b binding protein, chloroplastic4.21e-198100Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A1S3BPK7 Chlorophyll a-b binding protein, chloroplastic1.35e-19497.8Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGA+PSFGSSRKSASFVVRA ATPPVKQGADRQLWFASKQSL+YLDGSLPGDFGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A5D3DX73 Chlorophyll a-b binding protein, chloroplastic1.35e-19497.8Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGA+PSFGSSRKSASFVVRA ATPPVKQGADRQLWFASKQSL+YLDGSLPGDFGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1DIF2 Chlorophyll a-b binding protein, chloroplastic2.93e-18994.14Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAAR R GARPSFGSSRKSASFVVRAEATPPVKQGA+RQLWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGR+AMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1F4Q9 Chlorophyll a-b binding protein, chloroplastic2.60e-19096.35Show/hide
Query:  MATQALVSSS-LTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALVSSS LTSSVGAARQRLG +PS GSSRK+ASFVVRAEATPPVKQGA+RQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSS-LTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic2.2e-4242.47Show/hide
Query:  ALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVIN
        ++V ++  S +G  R R+     F +   S S  V A A  P     DR LWF       +LDGSLPGDFGFDPLGL SDPE        +W A  E+++
Subjt:  ALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVIN

Query:  GRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGG
         R+AMLGAAG   PE    +G++   +   W+       AG   Y+ D  TLFV E+ L+G+AE RR+ D  KPG +         K  G   D  YPGG
Subjt:  GRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGG

Query:  PLFNPLGFGKDEKS-MKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDP
          F+PLG+G    + +KEL+ KEIKNGRLAMLA++G + Q + TG GP  NL  HL+DP
Subjt:  PLFNPLGFGKDEKS-MKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDP

P27522 Chlorophyll a-b binding protein 8, chloroplastic2.2e-13588.32Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQAL+ SSS+++S  AARQ +G+R S   +RK ASFVVRA +TPPVKQGA+RQLWFASKQSLSYLDG LPGDFGFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEI G  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEK LGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQ LVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q32904 Chlorophyll a-b binding protein 3, chloroplastic8.9e-12984.53Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGAR---PSFGSSRKSASFVVRAEATPPVKQ-GADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRW
        MATQALV SSSLT +  A RQ   AR    S G SRK    +VRA ATPPVKQ G DR LWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRW
Subjt:  MATQALV-SSSLTSSVGAARQRLGAR---PSFGSSRKSASFVVRAEATPPVKQ-GADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRW

Query:  LAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGS
        LAYGEVINGRFAMLGA GAIAPE  G +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEK  GGS
Subjt:  LAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGS

Query:  GDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        G+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDH++DPVNNNVLTSLKFH
Subjt:  GDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic3.4e-4340.08Show/hide
Query:  RLGARPSFGSSRKSASFVVRAEATPPVKQG--------ADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA
        R G    F   R+ AS V+    +     G         +R  W        YLDG+L GD+GFDPLGL  DPE        +W    E+++ RFAMLG 
Subjt:  RLGARPSFGSSRKSASFVVRAEATPPVKQG--------ADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA

Query:  AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNP
        AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NP
Subjt:  AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNP

Query:  LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        LG  KD ++  + KLKEIKNGRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  ++ +L
Subjt:  LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

Q9SY97 Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic1.9e-13485.71Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ  G++P   +S+K +SFVV+A ATPPVKQGA+R LWFAS QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        +INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 52.4e-4440.08Show/hide
Query:  RLGARPSFGSSRKSASFVVRAEATPPVKQG--------ADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA
        R G    F   R+ AS V+    +     G         +R  W        YLDG+L GD+GFDPLGL  DPE        +W    E+++ RFAMLG 
Subjt:  RLGARPSFGSSRKSASFVVRAEATPPVKQG--------ADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA

Query:  AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNP
        AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NP
Subjt:  AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNP

Query:  LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        LG  KD ++  + KLKEIKNGRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  ++ +L
Subjt:  LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

AT1G45474.2 photosystem I light harvesting complex gene 52.4e-4440.08Show/hide
Query:  RLGARPSFGSSRKSASFVVRAEATPPVKQG--------ADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA
        R G    F   R+ AS V+    +     G         +R  W        YLDG+L GD+GFDPLGL  DPE        +W    E+++ RFAMLG 
Subjt:  RLGARPSFGSSRKSASFVVRAEATPPVKQG--------ADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA

Query:  AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNP
        AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NP
Subjt:  AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNP

Query:  LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        LG  KD ++  + KLKEIKNGRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  ++ +L
Subjt:  LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

AT1G61520.1 photosystem I light harvesting complex gene 31.3e-13585.71Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ  G++P   +S+K +SFVV+A ATPPVKQGA+R LWFAS QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        +INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

AT1G61520.2 photosystem I light harvesting complex gene 37.3e-11085.45Show/hide
Query:  QLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPY
        ++W  S  S      SLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD Y
Subjt:  QLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPY

Query:  TLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQN
        TLFV EMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQN
Subjt:  TLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQN

Query:  LLDHLSDPVNNNVLTSLKFH
        LLDHL+DPVNNNVLTSLKFH
Subjt:  LLDHLSDPVNNNVLTSLKFH

AT1G61520.3 photosystem I light harvesting complex gene 31.3e-13585.71Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ  G++P   +S+K +SFVV+A ATPPVKQGA+R LWFAS QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        +INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAGGCCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTT
TGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTGCCAGGCGATT
TCGGGTTTGACCCACTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGA
GCAGCAGGAGCCATAGCCCCAGAAATCTTTGGATCACTGGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAA
CTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAAT
ACTTTTTGGGCCTGGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGCGGGCCATTGTTCAACCCACTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGAA
TTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCA
TTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAGGCCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTT
TGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTGCCAGGCGATT
TCGGGTTTGACCCACTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGA
GCAGCAGGAGCCATAGCCCCAGAAATCTTTGGATCACTGGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAA
CTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAAT
ACTTTTTGGGCCTGGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGCGGGCCATTGTTCAACCCACTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGAA
TTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCA
TTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAG
Protein sequenceShow/hide protein sequence
MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLG
AAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKE
LKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH