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Cucsat.G7390 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7390
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description60S ribosomal protein L10a
Genome locationctg1528:897954..899427
RNA-Seq ExpressionCucsat.G7390
SyntenyCucsat.G7390
Gene Ontology termsGO:0000470 - maturation of LSU-rRNA (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR023674 - Ribosomal protein L1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033405.1 60S ribosomal protein L10a [Cucumis melo var. makuwa]3.99e-3988.31Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  DALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD SHVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

KAE8653536.1 hypothetical protein Csa_007457 [Cucumis sativus]2.74e-4798.68Show/hide
Query:  MYNKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEE
        MYNKLH DALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEE
Subjt:  MYNKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEE

XP_008458587.1 PREDICTED: 60S ribosomal protein L10a [Cucumis melo]1.47e-3988.31Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  DALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD SHVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

XP_031736021.1 60S ribosomal protein L10a-like [Cucumis sativus]7.44e-5098.75Show/hide
Query:  MYNKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISRS
        MYNKLH DALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISRS
Subjt:  MYNKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISRS

XP_038893874.1 60S ribosomal protein L10a [Benincasa hispida]4.75e-3885.71Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  DALREAISSIF DS EKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD SHVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

TrEMBL top hitse value%identityAlignment
A0A0A0KEW8 Ribosomal protein7.10e-4088.31Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  DALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD SHVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

A0A0A0M0B3 Uncharacterized protein3.26e-4896.15Show/hide
Query:  MYNKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEIS
        MYNKLH DALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEE++
Subjt:  MYNKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEIS

A0A1S3C7Q8 Ribosomal protein7.10e-4088.31Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  DALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD SHVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

A0A5A7SW61 60S ribosomal protein L10a1.93e-3988.31Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  DALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD SHVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

A0A5A7T1H8 Ribosomal protein3.26e-3884.42Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  DALREAISSIF DS EKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD SH+EE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

SwissProt top hitse value%identityAlignment
B7F845 60S ribosomal protein L10a2.5e-2771.43Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  + L+EAIS +  +S EK RKFTET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPKMK+C+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

B8B9K6 60S ribosomal protein L10a2.5e-2771.43Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  + L+EAIS +  +S EK RKFTET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPKMK+C+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

P59230 60S ribosomal protein L10a-27.3e-2772.73Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  +A+REAI++I   S EKKR F ET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

P59231 60S ribosomal protein L10a-38.1e-2673.08Show/hide
Query:  NKLHGDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  +A+REAISSI     E K R FTETIEL IGLKNYDPQKDKRFSGSVKLPH+PRPKMKIC+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

Q8VZB9 60S ribosomal protein L10a-12.1e-2672.73Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  +A+REAI++I   S  KKR F ETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

Arabidopsis top hitse value%identityAlignment
AT1G08360.1 Ribosomal protein L1p/L10e family1.5e-2772.73Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  +A+REAI++I   S  KKR F ETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

AT2G27530.1 Ribosomal protein L1p/L10e family5.2e-2872.73Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  +A+REAI++I   S EKKR F ET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

AT2G27530.2 Ribosomal protein L1p/L10e family5.2e-2872.73Show/hide
Query:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  +A+REAI++I   S EKKR F ET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPKMKIC+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

AT5G22440.1 Ribosomal protein L1p/L10e family5.7e-2773.08Show/hide
Query:  NKLHGDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  +A+REAISSI     E K R FTETIEL IGLKNYDPQKDKRFSGSVKLPH+PRPKMKIC+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR

AT5G22440.2 Ribosomal protein L1p/L10e family5.7e-2773.08Show/hide
Query:  NKLHGDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR
        +KL  +A+REAISSI     E K R FTETIEL IGLKNYDPQKDKRFSGSVKLPH+PRPKMKIC+LGD  HVEE  +
Subjt:  NKLHGDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEEISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTACTAGAATTTTCTAAGGGTTATAGTTTAATGGGTTTATGCTTGTTGAAGGCTTTGGTTGCTGATAGGTTTATTGGTATTTACTTTATTAATGTAGTTTTTTT
GCTTTGTATGTACAACAAACTTCATGGTGATGCGTTGAGAGAAGCCATTTCATCTATATTTGCTGATAGCGGTGAAAAGAAGCGCAAATTCACCGAGACCATTGAACTTC
ATATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGTTCAGTAAAGTTGCCGCATATCCCTCGCCCTAAGATGAAGATCTGCATTCTTGGAGATGTT
TCACATGTTGAAGAGATTTCAAGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTACTAGAATTTTCTAAGGGTTATAGTTTAATGGGTTTATGCTTGTTGAAGGCTTTGGTTGCTGATAGGTTTATTGGTATTTACTTTATTAATGTAGTTTTTTT
GCTTTGTATGTACAACAAACTTCATGGTGATGCGTTGAGAGAAGCCATTTCATCTATATTTGCTGATAGCGGTGAAAAGAAGCGCAAATTCACCGAGACCATTGAACTTC
ATATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGTTCAGTAAAGTTGCCGCATATCCCTCGCCCTAAGATGAAGATCTGCATTCTTGGAGATGTT
TCACATGTTGAAGAGATTTCAAGGAGTTGA
Protein sequenceShow/hide protein sequence
MVVLEFSKGYSLMGLCLLKALVADRFIGIYFINVVFLLCMYNKLHGDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDV
SHVEEISRS