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Cucsat.G741 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G741
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionla-related protein 1B-like
Genome locationctg1:401504..402360
RNA-Seq ExpressionCucsat.G741
SyntenyCucsat.G741
Gene Ontology termsGO:0006754 - ATP biosynthetic process (biological process)
GO:0006811 - ion transport (biological process)
GO:0009725 - response to hormone (biological process)
GO:0033993 - response to lipid (biological process)
GO:1901700 - response to oxygen-containing compound (biological process)
GO:0005622 - intracellular (cellular component)
GO:0016020 - membrane (cellular component)
GO:0032991 - protein-containing complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR006630 - La-type HTH domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8720347.1 peroxidase 64-like [Hibiscus syriacus]8.00e-2545.38Show/hide
Query:  FLPPMVHYINEPYNMYN-------------------PYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRI
        F PP+VH    P   +                    P+  PMP ++ PP    ++LY +I+NQ+NYYFS+ENL KDTFL++NMDD GWV I LIASF ++
Subjt:  FLPPMVHYINEPYNMYN-------------------PYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRI

Query:  QQLTNDIEFILFALKGSSFVEVWGYKIRRK
          LTN+I+ I+ ALK S+ VEV G K+RR+
Subjt:  QQLTNDIEFILFALKGSSFVEVWGYKIRRK

KAG5620913.1 hypothetical protein H5410_006131 [Solanum commersonii]3.49e-2246.28Show/hide
Query:  IPLPMPHPSGFLPPMVHYINEPYNMYNPYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF
        IP PMP    + PPMV+    P ++  P + P+P +Y   +  D +L+ RI+NQ++YYFS+ENL KDTFL++NMD+ GWV +TLIA F ++ +LT++I+ 
Subjt:  IPLPMPHPSGFLPPMVHYINEPYNMYNPYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF

Query:  ILFALKGSSFVEVWGYKIRRK
        IL  ++ S+ VEV G K+RR+
Subjt:  ILFALKGSSFVEVWGYKIRRK

XP_006361949.1 PREDICTED: la-related protein 1C-like isoform X2 [Solanum tuberosum]4.35e-2246.72Show/hide
Query:  IPLPMPHPSGFLPPMVHYINEPYNMYNPYVPPMPQIY-QPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIE
        IP PMP    + PPMV+    P ++  P + P+P +Y   P   D +L+ RI+NQ++YYFS+ENL KDTFL++NMD+ GWV +TLIA F ++ +LT++I+
Subjt:  IPLPMPHPSGFLPPMVHYINEPYNMYNPYVPPMPQIY-QPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIE

Query:  FILFALKGSSFVEVWGYKIRRK
         IL  ++ S+ VEV G K+RR+
Subjt:  FILFALKGSSFVEVWGYKIRRK

XP_022145446.1 la-related protein 1B-like [Momordica charantia]1.47e-3648.3Show/hide
Query:  SRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHG-AWGYSIPLPMPHPSGFL-----PPMVHYINEPYN----MYN-----PYVPPMPQIYQPPYYYDK
        S N    Y  + +      E+Y+I N+IW S  +G  W +  P+  P  SG++      PM +YI+  +     MYN     P  PP P IY P  +  K
Subjt:  SRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHG-AWGYSIPLPMPHPSGFL-----PPMVHYINEPYN----MYN-----PYVPPMPQIYQPPYYYDK

Query:  KLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK
        +LYW+IINQVNYYFSDENL  DTFLK++MD  GWV I LIA+F R++ LTNDIE+ILFAL GSS VEV   K+RRK
Subjt:  KLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK

XP_031739211.1 la-related protein 1C-like [Cucumis sativus]8.37e-158100Show/hide
Query:  MASSNHEDQGIRRVTYTERQRNNFSRASDSAANASRQQCNSFFTNFNQSRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHGAWGYSIPLPMPHPSGFL
        MASSNHEDQGIRRVTYTERQRNNFSRASDSAANASRQQCNSFFTNFNQSRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHGAWGYSIPLPMPHPSGFL
Subjt:  MASSNHEDQGIRRVTYTERQRNNFSRASDSAANASRQQCNSFFTNFNQSRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHGAWGYSIPLPMPHPSGFL

Query:  PPMVHYINEPYNMYNPYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVE
        PPMVHYINEPYNMYNPYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVE
Subjt:  PPMVHYINEPYNMYNPYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVE

Query:  VWGYKIRRKTVYISN
        VWGYKIRRKTVYISN
Subjt:  VWGYKIRRKTVYISN

TrEMBL top hitse value%identityAlignment
A0A061DF68 Winged-helix DNA-binding transcription factor family protein, putative1.26e-2153.68Show/hide
Query:  PYVPPMPQIYQP-PYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK
        P+V PMPQ++ P P   D +L+ RI+NQ++YYFS+ENL KDT+L++NMDD GWV I LIA F ++  LT++I+ IL AL+ S+ VEV G K+R++
Subjt:  PYVPPMPQIYQP-PYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK

A0A072UER5 ATP synthase, A subunit8.92e-2254.26Show/hide
Query:  PYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK
        P+VPPMP  Y  P   D +L+ +I+NQ++YYFS+ENL KD FL++NMD  GWV ITLIA F ++  LT++I+ I+ A++ SS VEV G KIRR+
Subjt:  PYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK

A0A6A3BWM3 Peroxidase 64-like3.87e-2545.38Show/hide
Query:  FLPPMVHYINEPYNMYN-------------------PYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRI
        F PP+VH    P   +                    P+  PMP ++ PP    ++LY +I+NQ+NYYFS+ENL KDTFL++NMDD GWV I LIASF ++
Subjt:  FLPPMVHYINEPYNMYN-------------------PYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRI

Query:  QQLTNDIEFILFALKGSSFVEVWGYKIRRK
          LTN+I+ I+ ALK S+ VEV G K+RR+
Subjt:  QQLTNDIEFILFALKGSSFVEVWGYKIRRK

A0A6J1CWB8 la-related protein 1B-like7.12e-3748.3Show/hide
Query:  SRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHG-AWGYSIPLPMPHPSGFL-----PPMVHYINEPYN----MYN-----PYVPPMPQIYQPPYYYDK
        S N    Y  + +      E+Y+I N+IW S  +G  W +  P+  P  SG++      PM +YI+  +     MYN     P  PP P IY P  +  K
Subjt:  SRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHG-AWGYSIPLPMPHPSGFL-----PPMVHYINEPYN----MYN-----PYVPPMPQIYQPPYYYDK

Query:  KLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK
        +LYW+IINQVNYYFSDENL  DTFLK++MD  GWV I LIA+F R++ LTNDIE+ILFAL GSS VEV   K+RRK
Subjt:  KLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK

A0A7J9G864 HTH La-type RNA-binding domain-containing protein (Fragment)9.07e-2252.08Show/hide
Query:  PYVPPMPQIY-QPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRKT
        P+V PMP ++  PP   D +L+ RI+NQ++YYFS+ENL KDT+L++NMDD GWV I LIA F ++  LT++I+ I  AL+ S  VEV G K+R++T
Subjt:  PYVPPMPQIY-QPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRKT

SwissProt top hitse value%identityAlignment
D5MCN2 La-related protein 12.0e-1139.52Show/hide
Query:  PLPMPHPSGFLPPMVH--------YINEPYNMYNPYVPPMPQIYQPPY----YYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFP
        P+PM  P    PP+             EP N   P+ P    IY PP       D  L   +  Q+ YYFS+ENL KD FL+R M   G++ + LIASFP
Subjt:  PLPMPHPSGFLPPMVH--------YINEPYNMYNPYVPPMPQIYQPPY----YYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFP

Query:  RIQQLTNDIEFILFALKGSSFVEV
        R++ LT D   IL ALK S+ V++
Subjt:  RIQQLTNDIEFILFALKGSSFVEV

Q6PKG0 La-related protein 12.4e-1253.52Show/hide
Query:  IINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK
        I  Q+ YYFS +NL +D FL+R MD  G++ ITLIASF R+Q LT DI  I  ALK S  VE+   K+RR+
Subjt:  IINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK

Q6ZQ58 La-related protein 15.4e-1253.52Show/hide
Query:  IINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK
        I  Q+ YYFS +NL +D FL+R MD  G++ ITLIASF R+Q LT DI  I  ALK S  VE+   K+RR+
Subjt:  IINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRK

Q8RWR2 La-related protein 1B4.4e-1440.34Show/hide
Query:  MPHPSGFLPPMVHYINEPYNMYNPYVPPMPQIYQPPYY--YDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFIL
        MPHPS           +P  +  P+  P+    QP Y+  +D  LY +I+ QV YYFS +NL +D  L+  M+D GWV + +IA+F R+ +LTN+I+ IL
Subjt:  MPHPSGFLPPMVHYINEPYNMYNPYVPPMPQIYQPPYY--YDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFIL

Query:  FALKGSSFVEVWGYKIRRK
         AL+ S  VE+ G  +RR+
Subjt:  FALKGSSFVEVWGYKIRRK

Q940X9 La-related protein 1A1.1e-1239.67Show/hide
Query:  PSGFLPPMVHYINEP-----YNMYNPYVPPMPQIYQPPYYYDKKLYW--RIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF
        P    P  V+Y+  P        Y P   P P    PP    +KL    R++ QV YYFSDENL  D +L   MD+ GWV   +IA F R++ +T D++F
Subjt:  PSGFLPPMVHYINEP-----YNMYNPYVPPMPQIYQPPYYYDKKLYW--RIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF

Query:  ILFALKGSSFVEVWGYKIRRK
        I++AL  S+ VEV G +IR++
Subjt:  ILFALKGSSFVEVWGYKIRRK

Arabidopsis top hitse value%identityAlignment
AT4G35890.1 winged-helix DNA-binding transcription factor family protein5.5e-1229.22Show/hide
Query:  TYTERQRNNFSRASDSAANASRQQCNSFFTNFNQ--SRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHGAWGYS-----IPLPMPHPSGFLPPMVHYI
        ++TE   +N S    +  N    Q +    N +Q  S  N++  HHQ        E+ N QN  +  S++G  G +      P  + HPS  + P+  ++
Subjt:  TYTERQRNNFSRASDSAANASRQQCNSFFTNFNQ--SRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHGAWGYS-----IPLPMPHPSGFLPPMVHYI

Query:  -NEPYNMYNP---------YVPPMPQIYQPP-------YYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFIL
          +P+  + P         Y P MP +   P       +Y D  L+ ++  Q+ YYFSDENL  D +L+  M++ G+V + ++A F ++ +LT++I+ I+
Subjt:  -NEPYNMYNP---------YVPPMPQIYQPP-------YYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFIL

Query:  FALKGSSFVEVWGYKIRRK
         AL+ S  VEV G  IR++
Subjt:  FALKGSSFVEVWGYKIRRK

AT5G21160.1 LA RNA-binding protein7.7e-1439.67Show/hide
Query:  PSGFLPPMVHYINEP-----YNMYNPYVPPMPQIYQPPYYYDKKLYW--RIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF
        P    P  V+Y+  P        Y P   P P    PP    +KL    R++ QV YYFSDENL  D +L   MD+ GWV   +IA F R++ +T D++F
Subjt:  PSGFLPPMVHYINEP-----YNMYNPYVPPMPQIYQPPYYYDKKLYW--RIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF

Query:  ILFALKGSSFVEVWGYKIRRK
        I++AL  S+ VEV G +IR++
Subjt:  ILFALKGSSFVEVWGYKIRRK

AT5G21160.2 LA RNA-binding protein7.7e-1439.67Show/hide
Query:  PSGFLPPMVHYINEP-----YNMYNPYVPPMPQIYQPPYYYDKKLYW--RIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF
        P    P  V+Y+  P        Y P   P P    PP    +KL    R++ QV YYFSDENL  D +L   MD+ GWV   +IA F R++ +T D++F
Subjt:  PSGFLPPMVHYINEP-----YNMYNPYVPPMPQIYQPPYYYDKKLYW--RIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF

Query:  ILFALKGSSFVEVWGYKIRRK
        I++AL  S+ VEV G +IR++
Subjt:  ILFALKGSSFVEVWGYKIRRK

AT5G21160.3 LA RNA-binding protein7.7e-1439.67Show/hide
Query:  PSGFLPPMVHYINEP-----YNMYNPYVPPMPQIYQPPYYYDKKLYW--RIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF
        P    P  V+Y+  P        Y P   P P    PP    +KL    R++ QV YYFSDENL  D +L   MD+ GWV   +IA F R++ +T D++F
Subjt:  PSGFLPPMVHYINEP-----YNMYNPYVPPMPQIYQPPYYYDKKLYW--RIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEF

Query:  ILFALKGSSFVEVWGYKIRRK
        I++AL  S+ VEV G +IR++
Subjt:  ILFALKGSSFVEVWGYKIRRK

AT5G66100.1 winged-helix DNA-binding transcription factor family protein3.1e-1540.34Show/hide
Query:  MPHPSGFLPPMVHYINEPYNMYNPYVPPMPQIYQPPYY--YDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFIL
        MPHPS           +P  +  P+  P+    QP Y+  +D  LY +I+ QV YYFS +NL +D  L+  M+D GWV + +IA+F R+ +LTN+I+ IL
Subjt:  MPHPSGFLPPMVHYINEPYNMYNPYVPPMPQIYQPPYY--YDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFIL

Query:  FALKGSSFVEVWGYKIRRK
         AL+ S  VE+ G  +RR+
Subjt:  FALKGSSFVEVWGYKIRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCATCAAACCATGAAGATCAGGGTATTAGAAGGGTGACATATACTGAACGTCAACGTAATAATTTTTCGAGAGCATCAGATTCTGCAGCAAATGCTTCACGACA
ACAATGTAATTCATTTTTCACAAATTTCAACCAAAGCAGAAATAATAAATCATATTATCATCATCAAAGGAGGGCCGCAATGAATAGAATTGAATACTACAATATTCAAA
ATGAAATTTGGTGTTCTTCCTATCATGGTGCTTGGGGCTACTCAATTCCTCTTCCTATGCCTCACCCATCAGGATTCTTACCTCCAATGGTTCATTATATAAACGAACCA
TATAATATGTATAATCCTTATGTACCACCGATGCCACAAATATATCAACCACCATATTATTATGATAAAAAGTTGTATTGGAGGATAATAAATCAAGTTAATTATTACTT
CAGTGATGAAAACTTATTTAAAGATACATTCCTGAAGAGAAATATGGATGACCATGGATGGGTTTGGATTACACTAATCGCTTCTTTTCCTAGAATTCAACAATTAACAA
ATGATATTGAATTTATTTTATTTGCACTGAAGGGATCAAGTTTTGTTGAAGTATGGGGCTACAAAATAAGGAGGAAGACAGTATATATCAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCATCAAACCATGAAGATCAGGGTATTAGAAGGGTGACATATACTGAACGTCAACGTAATAATTTTTCGAGAGCATCAGATTCTGCAGCAAATGCTTCACGACA
ACAATGTAATTCATTTTTCACAAATTTCAACCAAAGCAGAAATAATAAATCATATTATCATCATCAAAGGAGGGCCGCAATGAATAGAATTGAATACTACAATATTCAAA
ATGAAATTTGGTGTTCTTCCTATCATGGTGCTTGGGGCTACTCAATTCCTCTTCCTATGCCTCACCCATCAGGATTCTTACCTCCAATGGTTCATTATATAAACGAACCA
TATAATATGTATAATCCTTATGTACCACCGATGCCACAAATATATCAACCACCATATTATTATGATAAAAAGTTGTATTGGAGGATAATAAATCAAGTTAATTATTACTT
CAGTGATGAAAACTTATTTAAAGATACATTCCTGAAGAGAAATATGGATGACCATGGATGGGTTTGGATTACACTAATCGCTTCTTTTCCTAGAATTCAACAATTAACAA
ATGATATTGAATTTATTTTATTTGCACTGAAGGGATCAAGTTTTGTTGAAGTATGGGGCTACAAAATAAGGAGGAAGACAGTATATATCAGCAATTAA
Protein sequenceShow/hide protein sequence
MASSNHEDQGIRRVTYTERQRNNFSRASDSAANASRQQCNSFFTNFNQSRNNKSYYHHQRRAAMNRIEYYNIQNEIWCSSYHGAWGYSIPLPMPHPSGFLPPMVHYINEP
YNMYNPYVPPMPQIYQPPYYYDKKLYWRIINQVNYYFSDENLFKDTFLKRNMDDHGWVWITLIASFPRIQQLTNDIEFILFALKGSSFVEVWGYKIRRKTVYISN