; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7494 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7494
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionDNA-directed RNA polymerase III subunit RPC4
Genome locationctg1528:3427425..3431426
RNA-Seq ExpressionCucsat.G7494
SyntenyCucsat.G7494
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055789.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo var. makuwa]2.28e-17487.71Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQN ASQ RQKTCSMNELPSGS+  + +       LK G     VSSGMDCGFAQEVAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

XP_004144123.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus]6.89e-205100Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

XP_008450913.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo]1.31e-19393.86Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQN ASQ RQKTCSMNELPSGS+GKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

XP_022147557.1 DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia]3.28e-17182.59Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKN T A RK+KFAPKAP RR+PKPEVKAE+ E+ADAAQA+DLLKRFNEST RAKQ+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLP+S SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPE +V FLQ+PPMVP+ KQSS+VE M + +SS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ+K S+ RQ  CS+NELPSGS+GKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQ+VAAINVEGK CCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]1.56e-18589.42Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTAAPRKLKFAPKAP+RRIPKPEVKAE+AEDADAAQARDLLKRFNEST R KQ++GRKAAPTQVAFGSGG+SSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN  YDENTTT AM+LGLLEENPE DV FLQLPPMVPM+KQSS+VE  G+ NS 
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ+K SQPRQK C MNELPSGS+GKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQ+VAA+NVEGK CCIVGELSKRAILTPDVDS+LKNIEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein3.33e-205100Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC46.34e-19493.86Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQN ASQ RQKTCSMNELPSGS+GKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

A0A5A7UQN3 DNA-directed RNA polymerase III subunit RPC41.10e-17487.71Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQN ASQ RQKTCSMNELPSGS+  + +       LK G     VSSGMDCGFAQEVAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc41.59e-17182.59Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKN T A RK+KFAPKAP RR+PKPEVKAE+ E+ADAAQA+DLLKRFNEST RAKQ+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLP+S SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPE +V FLQ+PPMVP+ KQSS+VE M + +SS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ+K S+ RQ  CS+NELPSGS+GKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQ+VAAINVEGK CCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1JLT3 uncharacterized protein LOC1114855837.23e-16781.91Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        ME +  KN TA  RK+KFAPKAP RRIPKPEVK E+AEDADAAQARDLLKRFNEST RA+QR+G+KAAPTQVAFGSGG+S+T+RS+G+SKAGNR  NEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        +LP++TSKEYVEPWDYYSYYPVTLPLR PYSGNPDSLNEEEFGE SE L+YDE TTT A++LGLLEENPE D+ FLQLPPMVP+IKQSS+VE +G+ NSS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        E    SQPRQKTCSMNELPSGS+GKLLVYRSGAVKLKLGDIIYDVSSGM CGFAQ+VAAINVEGK CCI+GELSKRAILTPDV+SMLKN+EDL
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

SwissProt top hitse value%identityAlignment
O74857 DNA-directed RNA polymerase III subunit rpc44.2e-0726.59Show/hide
Query:  LNEEEFGEASENLTYDENTTTAAMNLGLLEENPEAD-----VLFLQLPPMVPM---------IKQSSSVEDMGSGNSSEQNKASQP---RQKTCSMNEL-
        +N+E+  E  E +  D    + A +LGL E+    D     ++ +Q P  +P          +  SS V++  +G  ++  +   P    ++  ++++L 
Subjt:  LNEEEFGEASENLTYDENTTTAAMNLGLLEENPEAD-----VLFLQLPPMVPM---------IKQSSSVEDMGSGNSSEQNKASQP---RQKTCSMNEL-

Query:  ---------PSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPD
                 P+G IG L V++SG   L++G + + V SG DC F QE+A ++ + KR   +G   +R I++PD
Subjt:  ---------PSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPD

P05423 DNA-directed RNA polymerase III subunit RPC44.4e-0928.24Show/hide
Query:  EADVLFLQLPPMVPMIKQSSSV-----EDMGSGN-----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAA
        E ++LFLQLP  +P    +  +     E  G          E+++ ++  +  C++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F QE+ +
Subjt:  EADVLFLQLPPMVPMIKQSSSV-----EDMGSGN-----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAA

Query:  INVEGKR---CCIVGELSKRAILTPDVDSML
        + +   R     ++G +  + + +PD +S+L
Subjt:  INVEGKR---CCIVGELSKRAILTPDVDSML

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC41.2e-0926.44Show/hide
Query:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLR--RPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVE
        P+ ED  +     K   EP D      +  PLR  R   G P  ++  E                    L  L    E ++LFLQLP  +P    +  ++
Subjt:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLR--RPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVE

Query:  DMGSGNSSE--------QNKASQPR--QKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKR---CCIVGELSKRAIL
         + +   SE        Q K  + R  + TC++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F QE+ ++ +   R     ++G +  + + 
Subjt:  DMGSGNSSE--------QNKASQPR--QKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKR---CCIVGELSKRAIL

Query:  TPDVDSML
        +P+ +S+L
Subjt:  TPDVDSML

Q8T1V7 DNA-directed RNA polymerase III subunit rpc46.6e-0526.36Show/hide
Query:  NPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSSEQNKAS-----QPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINV
        NP+  +    +P     I +++ +ED       E ++ +      P     S+ E+PSG +G L +Y+SG   LK+G + YD+SSG    F +EV     
Subjt:  NPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSSEQNKAS-----QPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINV

Query:  EG-----KRCCIVGELSKRAILTPDVDSM
        +G       C  +G  S+  +  P +  +
Subjt:  EG-----KRCCIVGELSKRAILTPDVDSM

Q91WD1 DNA-directed RNA polymerase III subunit RPC41.7e-0824.27Show/hide
Query:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSV---
        P+ ED  +     K   EP D      V  P R                  +  L  D +       L L+++    ++LFLQLP  +P    +  +   
Subjt:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSV---

Query:  --EDMGSGN-----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKR---CCIVGELSKRAILTP
          E  G          E+++ ++  +  C++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F QE+ ++ +   R     ++G +  + + +P
Subjt:  --EDMGSGN-----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKR---CCIVGELSKRAILTP

Query:  DVDSML
        D +S+L
Subjt:  DVDSML

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC48.8e-3733.33Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIP-KPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNE-
        M+    K+K    R+ +  P  P RR+P  P    E  ED +  +A    ++F+      + +   KA+  +VAF    S   +RS+GV K  ++P ++ 
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIP-KPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNE-

Query:  DGTLPAS------------------------TSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLE-ENPEAD
        + + PAS                        T  +YVEPWDY  SYYP  LPLR+P SG+ + L++EEFGE ++N  YDENT  +A  LGL   ++ +  
Subjt:  DGTLPAS------------------------TSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLE-ENPEAD

Query:  VLFLQLPPMVPMIKQSS------SVEDMGSGNSSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKR
        +   ++P  +P++KQ++      SV +  SG S+                 LP G +GK+LVY+SGAVKLK+GD ++DVS G       +V AI+++G+ 
Subjt:  VLFLQLPPMVPMIKQSS------SVEDMGSGNSSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKR

Query:  CCIVGELSKRAILTPDVDSMLKNIEDL
        C  +G  +K   +TPDV+S+L    D+
Subjt:  CCIVGELSKRAILTPDVDSMLKNIEDL

AT5G09380.1 RNA polymerase III RPC41.4e-5846.26Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAED-ADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        MEQ PP       RK+KFAPKAP +R+PKPEVK EV ED +++AQA +LL+R NE + R K +  +K   +QVA+  GG  ++ RS   +K  NR     
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAED-ADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNS
        G+  ++   EY EPWDYYSYYP+TLP+RRPY+G+P+ L+ EEF +A     + E++   A NLGL+E++ E  + F++L P VP+   S+  E++     
Subjt:  GTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNS

Query:  SEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        +  N      +KT  +  LP G +GKLLVY+SGAVK+KLG+++YDVS G+   FAQ+V  +N E K CC+VG++ K A+LTPD+DS+LK+IE++
Subjt:  SEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAAATCCACCAAAAAACAAGACAGCTGCTCCAAGGAAGTTGAAATTTGCTCCAAAAGCACCTGTCCGGCGTATACCAAAACCTGAAGTCAAAGCAGAAGTAGC
AGAGGATGCTGATGCTGCTCAAGCCAGGGATTTACTTAAACGCTTCAATGAAAGCACCCAGAGGGCAAAGCAAAGAGTTGGGAGAAAAGCGGCACCTACACAAGTTGCAT
TTGGCTCTGGAGGTTCATCGAGCACCCTAAGATCATATGGTGTTTCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGGCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTCTGCGGAGACCATATTCAGGAAATCCAGATTCTCTAAACGAGGAAGAATTTGGTGAGGCTTCAGA
AAACTTAACCTACGATGAAAATACAACAACTGCAGCAATGAATCTTGGTCTATTGGAGGAGAACCCGGAGGCAGATGTCCTTTTTTTACAATTACCACCTATGGTGCCTA
TGATAAAGCAATCTTCTTCAGTAGAAGACATGGGGTCAGGCAACAGCTCAGAACAAAACAAGGCCTCACAACCTCGACAGAAAACCTGCTCTATGAATGAGTTACCTTCT
GGCTCCATCGGTAAACTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAACTTGGCGATATCATATATGATGTTTCTTCTGGAATGGATTGTGGCTTTGCTCAAGAAGT
TGCAGCTATCAACGTGGAAGGGAAGCGTTGCTGCATCGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACACCAGATGTGGATTCAATGTTAAAGAATATTGAGGATTTAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAAATCCACCAAAAAACAAGACAGCTGCTCCAAGGAAGTTGAAATTTGCTCCAAAAGCACCTGTCCGGCGTATACCAAAACCTGAAGTCAAAGCAGAAGTAGC
AGAGGATGCTGATGCTGCTCAAGCCAGGGATTTACTTAAACGCTTCAATGAAAGCACCCAGAGGGCAAAGCAAAGAGTTGGGAGAAAAGCGGCACCTACACAAGTTGCAT
TTGGCTCTGGAGGTTCATCGAGCACCCTAAGATCATATGGTGTTTCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGGCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTCTGCGGAGACCATATTCAGGAAATCCAGATTCTCTAAACGAGGAAGAATTTGGTGAGGCTTCAGA
AAACTTAACCTACGATGAAAATACAACAACTGCAGCAATGAATCTTGGTCTATTGGAGGAGAACCCGGAGGCAGATGTCCTTTTTTTACAATTACCACCTATGGTGCCTA
TGATAAAGCAATCTTCTTCAGTAGAAGACATGGGGTCAGGCAACAGCTCAGAACAAAACAAGGCCTCACAACCTCGACAGAAAACCTGCTCTATGAATGAGTTACCTTCT
GGCTCCATCGGTAAACTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAACTTGGCGATATCATATATGATGTTTCTTCTGGAATGGATTGTGGCTTTGCTCAAGAAGT
TGCAGCTATCAACGTGGAAGGGAAGCGTTGCTGCATCGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACACCAGATGTGGATTCAATGTTAAAGAATATTGAGGATTTAT
AA
Protein sequenceShow/hide protein sequence
MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDGTLPASTSKEY
VEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSSEQNKASQPRQKTCSMNELPS
GSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL