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Cucsat.G7504 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7504
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description30S ribosomal protein S16
Genome locationctg1528:3623620..3626437
RNA-Seq ExpressionCucsat.G7504
SyntenyCucsat.G7504
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008344026.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial-like isoform X2 [Malus domestica]7.14e-7989.52Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRL+RFGCKN+PFYRVMAADSRSPRDGKHLE+LGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFR+GLLPPPPMVAMGRKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGE
        RPVDP+SGRFVTP K    G  G+
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGE

XP_008450874.1 PREDICTED: 30S ribosomal protein S16 [Cucumis melo]1.47e-8495.97Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMG+NFERVKYWLSVGAQPSDP+QRILFR+GLLPPPPMVAMGRKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGE
        RPVDPLSGRFVTP KKPTD SNGE
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGE

XP_011659994.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial [Cucumis sativus]1.74e-89100Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGEADS
        RPVDPLSGRFVTPAKKPTDGSNGEADS
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGEADS

XP_022147743.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial [Momordica charantia]8.87e-7989.23Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLE+LGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFR+G+LPPPPMVAM RKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSN---GEADS
        RPVDPLSGRFVTP +KPTD S+   G ADS
Subjt:  RPVDPLSGRFVTPAKKPTDGSN---GEADS

XP_038880699.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial isoform X2 [Benincasa hispida]6.25e-7990Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLE+LGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFR+G+LPPPPMVAM RKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTD---GSNGEADS
        R VDPLSGRFVTP +KPTD   G +G+ADS
Subjt:  RPVDPLSGRFVTPAKKPTD---GSNGEADS

TrEMBL top hitse value%identityAlignment
A0A0A0LZG2 Uncharacterized protein8.44e-90100Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGEADS
        RPVDPLSGRFVTPAKKPTDGSNGEADS
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGEADS

A0A1S3BQ70 30S ribosomal protein S167.10e-8595.97Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMG+NFERVKYWLSVGAQPSDP+QRILFR+GLLPPPPMVAMGRKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGE
        RPVDPLSGRFVTP KKPTD SNGE
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGE

A0A5D3CDW9 30S ribosomal protein S167.10e-8595.97Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMG+NFERVKYWLSVGAQPSDP+QRILFR+GLLPPPPMVAMGRKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGE
        RPVDPLSGRFVTP KKPTD SNGE
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGE

A0A6J1D251 30S ribosomal protein S16-2, chloroplastic/mitochondrial4.30e-7989.23Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLE+LGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFR+G+LPPPPMVAM RKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSN---GEADS
        RPVDPLSGRFVTP +KPTD S+   G ADS
Subjt:  RPVDPLSGRFVTPAKKPTDGSN---GEADS

A0A6J1HXD7 30S ribosomal protein S16-2, chloroplastic/mitochondrial-like4.44e-7989.31Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLE+LGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFR+G+LPPPPMVAM RKGGPRDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSN----GEADS
        RPVDPLSGRF TP +K TD SN    G+ADS
Subjt:  RPVDPLSGRFVTPAKKPTDGSN----GEADS

SwissProt top hitse value%identityAlignment
A8LMC0 30S ribosomal protein S161.2e-1941.27Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        M ++IRL+R G K +PFYR++AADSR PRDG+ +E LG YNPL  +D   R+ ++ ERV+YWL  GA+P+D V R+L  + +LP         +  P+  
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGEAD
         P      R    A K  + S   AD
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGEAD

O65686 30S ribosomal protein S16-1, chloroplastic1.2e-3254.46Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        M V+IRL+R GCK++PFYRV+ AD +S RDGK +E+LG+Y+PL G++   R+ L F+R+KYWLSVGAQP+D V+ +LFR+GL+PP PMV +G K G + T
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  -RPVDPLSGRFV
         + V P++G  +
Subjt:  -RPVDPLSGRFV

Q16AN8 30S ribosomal protein S165.4e-2054.88Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGL
        M ++IRL+R G K +PFYR++AADSR PRDG+ +E LG YNPL  +D  +R+ ++ ERV+YWL  GAQP+D V R+L  +GL
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGL

Q2RV59 30S ribosomal protein S161.2e-1957.32Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGL
        M +RIRL+R G K +PFYR++ ADSRSPRDG+ +E LG ++P+  +D  +R+ L  ERVKYWL VGA PSD V R L  SGL
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGL

Q9LTS6 30S ribosomal protein S16-2, chloroplastic/mitochondrial7.2e-5780.65Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKN+PF+RVMAADSRSPRDGKHLE+LGY+NPLPGQDGGKRMGL F+R+KYWLSVGAQPSDPVQR+LFRSGLLPPPPMVAMGRKGG RDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGE
        RPVDP++GR+V    K  + ++ +
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGE

Arabidopsis top hitse value%identityAlignment
AT4G34620.1 small subunit ribosomal protein 168.8e-3454.46Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        M V+IRL+R GCK++PFYRV+ AD +S RDGK +E+LG+Y+PL G++   R+ L F+R+KYWLSVGAQP+D V+ +LFR+GL+PP PMV +G K G + T
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  -RPVDPLSGRFV
         + V P++G  +
Subjt:  -RPVDPLSGRFV

AT5G56940.1 Ribosomal protein S16 family protein5.1e-5880.65Show/hide
Query:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT
        MVVRIRLSRFGCKN+PF+RVMAADSRSPRDGKHLE+LGY+NPLPGQDGGKRMGL F+R+KYWLSVGAQPSDPVQR+LFRSGLLPPPPMVAMGRKGG RDT
Subjt:  MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDT

Query:  RPVDPLSGRFVTPAKKPTDGSNGE
        RPVDP++GR+V    K  + ++ +
Subjt:  RPVDPLSGRFVTPAKKPTDGSNGE

ATCG00050.1 ribosomal protein S161.4e-0733.33Show/hide
Query:  VVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGL
        +V++RL R G K +  YR++A D R  R+G+ L  +G+Y+P+  Q       LN   +  +L  GAQP+     I  ++G+
Subjt:  VVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTCGAATTCGATTGTCCAGGTTTGGTTGTAAGAACAAGCCGTTTTACAGGGTCATGGCTGCCGATAGCCGATCTCCTCGTGACGGCAAACATCTTGAGATTCT
AGGTTACTATAATCCCTTACCAGGTCAGGATGGTGGTAAACGAATGGGTCTTAATTTTGAAAGAGTGAAGTATTGGCTTTCAGTTGGTGCTCAGCCTTCGGACCCCGTGC
AGCGTATTCTTTTTAGATCAGGGTTACTTCCACCACCCCCAATGGTTGCAATGGGACGTAAAGGTGGACCACGTGATACTCGTCCTGTTGATCCTTTGAGCGGACGCTTC
GTCACTCCAGCGAAGAAGCCAACTGATGGTTCCAATGGTGAAGCCGATTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTCGAATTCGATTGTCCAGGTTTGGTTGTAAGAACAAGCCGTTTTACAGGGTCATGGCTGCCGATAGCCGATCTCCTCGTGACGGCAAACATCTTGAGATTCT
AGGTTACTATAATCCCTTACCAGGTCAGGATGGTGGTAAACGAATGGGTCTTAATTTTGAAAGAGTGAAGTATTGGCTTTCAGTTGGTGCTCAGCCTTCGGACCCCGTGC
AGCGTATTCTTTTTAGATCAGGGTTACTTCCACCACCCCCAATGGTTGCAATGGGACGTAAAGGTGGACCACGTGATACTCGTCCTGTTGATCCTTTGAGCGGACGCTTC
GTCACTCCAGCGAAGAAGCCAACTGATGGTTCCAATGGTGAAGCCGATTCATAG
Protein sequenceShow/hide protein sequence
MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGRF
VTPAKKPTDGSNGEADS