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Cucsat.G7531 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7531
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLeucine-rich repeat extensin-like protein 4
Genome locationctg1528:4159692..4161294
RNA-Seq ExpressionCucsat.G7531
SyntenyCucsat.G7531
Gene Ontology termsNA
InterPro domainsIPR013210 - Leucine-rich repeat-containing N-terminal, plant-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10136.1 leucine-rich repeat extensin-like protein 4 [Cucumis melo var. makuwa]1.18e-7295.16Show/hide
Query:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGG-TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
        MK F FLTSLLFFILTNSP T+SFEVAVNGGIGVGVTIGG GG TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
Subjt:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGG-TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ

Query:  VQDETTSSPVDIVAGIDLNHANLG
        VQDETTSSPVDIVAGIDLNHANLG
Subjt:  VQDETTSSPVDIVAGIDLNHANLG

XP_004135680.3 leucine-rich repeat extensin-like protein 4 [Cucumis sativus]8.60e-93100Show/hide
Query:  MATLLLTNTNIFISFFHQKLKMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLG
        MATLLLTNTNIFISFFHQKLKMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLG
Subjt:  MATLLLTNTNIFISFFHQKLKMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLG

Query:  ILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLG
        ILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLG
Subjt:  ILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLG

XP_008450798.2 PREDICTED: leucine-rich repeat extensin-like protein 4 [Cucumis melo]3.33e-7294.35Show/hide
Query:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGG-TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
        MK F FLTSLLFFI+TNSP T+SFEVAVNGGIGVGVTIGG GG TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
Subjt:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGG-TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ

Query:  VQDETTSSPVDIVAGIDLNHANLG
        VQDETTSSPVDIVAGIDLNHANLG
Subjt:  VQDETTSSPVDIVAGIDLNHANLG

XP_022960570.1 leucine-rich repeat extensin-like protein 6 [Cucurbita moschata]3.44e-5878.05Show/hide
Query:  NFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTG---VWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
        NF  +T L+FF+LTN+PAT SF V +NGGIG+GVTIGG GG G   VWIGGNNG  TPRLNRAYTALQ+WKSAITSDPLGIL +WVGPNVCSY+GVFCAQ
Subjt:  NFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTG---VWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ

Query:  VQDETTSSPVDIVAGIDLNHANL
        V+DE+TSS VDI+AGIDLNHANL
Subjt:  VQDETTSSPVDIVAGIDLNHANL

XP_038878651.1 leucine-rich repeat extensin-like protein 6 [Benincasa hispida]5.10e-6887.3Show/hide
Query:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGS---GGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFC
        MKNF+ LT L+FF+LTN PA++SFEVAVNGGIGVGVTIGG    GG GVWIGGNNGSP PRLNRAYTALQ+WKSAITSDPLGILTTWVGPNVCSY+GVFC
Subjt:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGS---GGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFC

Query:  AQVQDETTSSPVDIVAGIDLNHANLG
        AQVQDETTSSPVDIVAGIDLNHANLG
Subjt:  AQVQDETTSSPVDIVAGIDLNHANLG

TrEMBL top hitse value%identityAlignment
A0A0A0LWP9 LRRNT_2 domain-containing protein4.16e-93100Show/hide
Query:  MATLLLTNTNIFISFFHQKLKMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLG
        MATLLLTNTNIFISFFHQKLKMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLG
Subjt:  MATLLLTNTNIFISFFHQKLKMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLG

Query:  ILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLG
        ILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLG
Subjt:  ILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLG

A0A1S3BQ04 leucine-rich repeat extensin-like protein 41.61e-7294.35Show/hide
Query:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGG-TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
        MK F FLTSLLFFI+TNSP T+SFEVAVNGGIGVGVTIGG GG TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
Subjt:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGG-TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ

Query:  VQDETTSSPVDIVAGIDLNHANLG
        VQDETTSSPVDIVAGIDLNHANLG
Subjt:  VQDETTSSPVDIVAGIDLNHANLG

A0A5D3CI93 Leucine-rich repeat extensin-like protein 45.70e-7395.16Show/hide
Query:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGG-TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
        MK F FLTSLLFFILTNSP T+SFEVAVNGGIGVGVTIGG GG TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
Subjt:  MKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGG-TGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ

Query:  VQDETTSSPVDIVAGIDLNHANLG
        VQDETTSSPVDIVAGIDLNHANLG
Subjt:  VQDETTSSPVDIVAGIDLNHANLG

A0A6J1H9G2 leucine-rich repeat extensin-like protein 61.66e-5878.05Show/hide
Query:  NFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTG---VWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ
        NF  +T L+FF+LTN+PAT SF V +NGGIG+GVTIGG GG G   VWIGGNNG  TPRLNRAYTALQ+WKSAITSDPLGIL +WVGPNVCSY+GVFCAQ
Subjt:  NFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTG---VWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQ

Query:  VQDETTSSPVDIVAGIDLNHANL
        V+DE+TSS VDI+AGIDLNHANL
Subjt:  VQDETTSSPVDIVAGIDLNHANL

A0A6J1KT44 leucine-rich repeat extensin-like protein 49.24e-5874.44Show/hide
Query:  MKNFSFLTSLLFFILTNSPATRSFEV------AVNGGIGVGVTIGGSGGTGVWIGGNNGS-----PTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNV
        M+NF  LTSL+FF+LTN  AT +F V      AVNGGIGVG+TIG  GG GVWIGGN G      PTPRLNRAY ALQ+WKSAITSDPLGIL++WVGPNV
Subjt:  MKNFSFLTSLLFFILTNSPATRSFEV------AVNGGIGVGVTIGGSGGTGVWIGGNNGS-----PTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNV

Query:  CSYRGVFCAQVQDETTSSPVDIVAGIDLNHANL
        CSY+GVFCAQVQDE TSSPVDI+AGIDLNHANL
Subjt:  CSYRGVFCAQVQDETTSSPVDIVAGIDLNHANL

SwissProt top hitse value%identityAlignment
Q9LHF1 Leucine-rich repeat extensin-like protein 45.2e-1446.51Show/hide
Query:  GSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY
        G  G  V +  +     PRL  AY ALQ+WK AI SDP  I   W+G NVC+Y GVFC++  D   +  +  VAGIDLNHA++  Y
Subjt:  GSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY

Q9LJ64 Pollen-specific leucine-rich repeat extensin-like protein 14.3e-1657.35Show/hide
Query:  RLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY
        RL RAY ALQ+WK A  SDP      WVGP+VCSY+GVFCA   D+ +   V +VAGIDLNHA++  Y
Subjt:  RLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY

Q9LUI1 Leucine-rich repeat extensin-like protein 61.9e-1659.42Show/hide
Query:  PRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY
        PRL +A+TALQ+WK  ITSDP G  + W GPNVC+Y GVFCA   D   +  V  VAGIDLNHAN+  Y
Subjt:  PRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY

Q9T0K5 Leucine-rich repeat extensin-like protein 31.4e-1452.17Show/hide
Query:  PRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY
        PRL  AY ALQ+WK AI SDP    + W+G NVC+Y GVFC+   D   +  +  VAGIDLNHA++  Y
Subjt:  PRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY

Q9XIB6 Pollen-specific leucine-rich repeat extensin-like protein 24.0e-1451.47Show/hide
Query:  RLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY
        RL RAY ALQ+WK AI SDP      WVG +VCSY GV+CA   D+ +   + +VAG+DLNHA++  +
Subjt:  RLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY

Arabidopsis top hitse value%identityAlignment
AT2G19780.1 Leucine-rich repeat (LRR) family protein1.9e-1948.12Show/hide
Query:  NFSFLTSLLF---FILTNSPATRSFEVAVNGGIGVGVTIGGSGGT--GVWIGGNNGSPTP--------RLNRAYTALQSWKSAITSDPLGILTTWVGPNV
        NFS L+  LF    ILTN  +           IGVGV IGG  G   GVWIGG N +  P          N AY ALQSWKSAIT DP G+L TWVG +V
Subjt:  NFSFLTSLLF---FILTNSPATRSFEVAVNGGIGVGVTIGGSGGT--GVWIGGNNGSPTP--------RLNRAYTALQSWKSAITSDPLGILTTWVGPNV

Query:  CSYRGVFCAQVQDETTSSPVDIVAGIDLNHANL
        CSYRGVFC+             +  IDLN ANL
Subjt:  CSYRGVFCAQVQDETTSSPVDIVAGIDLNHANL

AT3G19020.1 Leucine-rich repeat (LRR) family protein3.0e-1757.35Show/hide
Query:  RLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY
        RL RAY ALQ+WK A  SDP      WVGP+VCSY+GVFCA   D+ +   V +VAGIDLNHA++  Y
Subjt:  RLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY

AT3G22800.1 Leucine-rich repeat (LRR) family protein1.4e-1759.42Show/hide
Query:  PRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY
        PRL +A+TALQ+WK  ITSDP G  + W GPNVC+Y GVFCA   D   +  V  VAGIDLNHAN+  Y
Subjt:  PRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY

AT3G24480.1 Leucine-rich repeat (LRR) family protein3.7e-1546.51Show/hide
Query:  GSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY
        G  G  V +  +     PRL  AY ALQ+WK AI SDP  I   W+G NVC+Y GVFC++  D   +  +  VAGIDLNHA++  Y
Subjt:  GSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDY

AT4G29240.1 Leucine-rich repeat (LRR) family protein1.4e-1743.7Show/hide
Query:  KMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGV-TIGGSGGTGVWIGG--NN--------GSPTPRLNR-AYTALQSWKSAITSDPLGILTTWVGP
        K K  +    L FF+             V GG+GVG+   GG GG GVW+GG  NN        GS  P  NR AY ALQ WKSA+  DP  +L TWVG 
Subjt:  KMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGV-TIGGSGGTGVWIGG--NN--------GSPTPRLNR-AYTALQSWKSAITSDPLGILTTWVGP

Query:  NVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANL
        +VCSY+GVFC+             +  IDLNHANL
Subjt:  NVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTCTACTTTTGACAAACACAAACATTTTCATTTCCTTCTTTCACCAAAAATTGAAAATGAAAAATTTCTCATTCCTCACTTCTCTCCTCTTCTTCATCCTCAC
AAATTCCCCTGCAACTAGAAGCTTCGAAGTAGCCGTCAATGGGGGAATCGGAGTCGGCGTTACCATCGGCGGCAGCGGAGGAACCGGGGTTTGGATTGGTGGAAACAATG
GCTCACCAACACCAAGGCTAAACAGAGCTTACACCGCACTACAATCATGGAAATCTGCCATTACAAGCGATCCGTTGGGGATTTTAACCACTTGGGTTGGTCCTAATGTT
TGTTCTTACAGAGGGGTTTTTTGTGCACAAGTTCAAGACGAAACGACGTCCTCACCCGTCGACATTGTTGCCGGAATCGACCTAAATCACGCCAATCTCGGAGATTATGA
ATTTTGGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTCTACTTTTGACAAACACAAACATTTTCATTTCCTTCTTTCACCAAAAATTGAAAATGAAAAATTTCTCATTCCTCACTTCTCTCCTCTTCTTCATCCTCAC
AAATTCCCCTGCAACTAGAAGCTTCGAAGTAGCCGTCAATGGGGGAATCGGAGTCGGCGTTACCATCGGCGGCAGCGGAGGAACCGGGGTTTGGATTGGTGGAAACAATG
GCTCACCAACACCAAGGCTAAACAGAGCTTACACCGCACTACAATCATGGAAATCTGCCATTACAAGCGATCCGTTGGGGATTTTAACCACTTGGGTTGGTCCTAATGTT
TGTTCTTACAGAGGGGTTTTTTGTGCACAAGTTCAAGACGAAACGACGTCCTCACCCGTCGACATTGTTGCCGGAATCGACCTAAATCACGCCAATCTCGGAGATTATGA
ATTTTGGGCATAA
Protein sequenceShow/hide protein sequence
MATLLLTNTNIFISFFHQKLKMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNV
CSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDYEFWA