; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7556 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7556
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptiontrafficking protein particle complex subunit 6B
Genome locationctg1528:4597961..4601314
RNA-Seq ExpressionCucsat.G7556
SyntenyCucsat.G7556
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0043087 - regulation of GTPase activity (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007194 - Transport protein particle (TRAPP) component
IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily
IPR037992 - TRAPP complex, Trs33 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135644.1 trafficking protein particle complex subunit 6B isoform X2 [Cucumis sativus]1.35e-12097.16Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSER     YTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_008450727.1 PREDICTED: trafficking protein particle complex subunit 6B isoform X1 [Cucumis melo]9.76e-12498.86Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVF RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_008450728.1 PREDICTED: trafficking protein particle complex subunit 6B isoform X2 [Cucumis melo]5.51e-12096.59Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSER     YTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_031736214.1 trafficking protein particle complex subunit 6B isoform X1 [Cucumis sativus]6.34e-127100Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_038878648.1 trafficking protein particle complex subunit 6B [Benincasa hispida]9.15e-11995.45Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSER     YTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQ+ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

TrEMBL top hitse value%identityAlignment
A0A0A0M1M8 Uncharacterized protein6.55e-12197.16Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSER     YTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A1S3BP90 trafficking protein particle complex subunit 6B isoform X22.67e-12096.59Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSER     YTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A1S3BQW9 trafficking protein particle complex subunit 6B isoform X14.73e-12498.86Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVF RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A5D3CG65 Trafficking protein particle complex subunit 6B isoform X22.67e-12096.59Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSER     YTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A6J1I0Q5 trafficking protein particle complex subunit 6B1.48e-11594.32Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREV+ESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSER     YTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDP-QNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        QDNRFRWLTRMSVDP Q ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Subjt:  QDNRFRWLTRMSVDP-QNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

SwissProt top hitse value%identityAlignment
F1QMV3 Trafficking protein particle complex subunit 6b6.1e-3046.43Show/hide
Query:  RIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATS
        ++E +G++VG  L ERF     T + PRF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT++S   Q               +   
Subjt:  RIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATS

Query:  MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
          L F CG++RGALSN+G+   V+A++S +PAC F V I+
Subjt:  MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q32L78 Trafficking protein particle complex subunit 6B1.6e-3048.57Show/hide
Query:  RIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATS
        ++E +G++VG  L ERF     T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS   Q               +  S
Subjt:  RIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATS

Query:  MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         +L F CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q78XR0 Trafficking protein particle complex subunit 6A1.2e-2238.85Show/hide
Query:  IEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSM
        +E +G++VG  L ER       +E P F + L+A+KF+C+D W+ +F+K +D L+TNH+GT+VLQDN F  L  M   PQ               +    
Subjt:  IEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSM

Query:  HLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         L F CG++ GAL  LG    V+A +++LPAC F V I+
Subjt:  HLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q86SZ2 Trafficking protein particle complex subunit 6B1.6e-3048.57Show/hide
Query:  RIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATS
        ++E +G++VG  L ERF     T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS   Q               +  S
Subjt:  RIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATS

Query:  MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         +L F CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q9D289 Trafficking protein particle complex subunit 6B8.0e-3047.14Show/hide
Query:  RIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATS
        ++E++G++VG  L ERF     T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR L ++S   Q               +  S
Subjt:  RIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATS

Query:  MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         +L F CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  MHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Arabidopsis top hitse value%identityAlignment
AT3G05000.1 Transport protein particle (TRAPP) component1.0e-8080.9Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVD++L EMV+ Y  RFYANKPELAARRIEAIGYQVGHQLSE     RYTMERPRF+DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDP--QNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDN+FRWL+R+S+DP  +NE+QD S  GE+K AQA SM+LYFPCGIIRG LSNLGIPCAVSADIS+LP CSFV+R+KA
Subjt:  QDNRFRWLTRMSVDP--QNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGAGGTAGCAGAGAGTTGCGTTGACAGTCTTTTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGCCGCCCGTCGCAT
CGAGGCAATTGGTTATCAGGTTGGCCATCAGCTCTCCGAACGCTTTGTTTTCACTAGGTATACGATGGAGCGGCCTCGGTTCACGGATCATCTTGAAGCAATCAAATTTA
TCTGCAAGGACTTCTGGTCCGAACTCTTCAAAAAGCAAATAGACAACTTGAAAACAAATCATAGGGGCACCTTTGTCTTGCAAGATAATCGATTCCGCTGGCTTACTCGC
ATGTCGGTGGATCCTCAAAATGAATCACAAGATAATTCTGCAGATGGTGAAAACAAGGTAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATACGAGG
TGCTCTTTCAAATTTGGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTTCATTTGTTGTTCGTATAAAGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGAGGTAGCAGAGAGTTGCGTTGACAGTCTTTTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGCCGCCCGTCGCAT
CGAGGCAATTGGTTATCAGGTTGGCCATCAGCTCTCCGAACGCTTTGTTTTCACTAGGTATACGATGGAGCGGCCTCGGTTCACGGATCATCTTGAAGCAATCAAATTTA
TCTGCAAGGACTTCTGGTCCGAACTCTTCAAAAAGCAAATAGACAACTTGAAAACAAATCATAGGGGCACCTTTGTCTTGCAAGATAATCGATTCCGCTGGCTTACTCGC
ATGTCGGTGGATCCTCAAAATGAATCACAAGATAATTCTGCAGATGGTGAAAACAAGGTAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATACGAGG
TGCTCTTTCAAATTTGGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTTCATTTGTTGTTCGTATAAAGGCCTGA
Protein sequenceShow/hide protein sequence
MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTR
MSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA