; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7623 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7623
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionC3H1-type domain-containing protein
Genome locationctg1528:5643743..5647522
RNA-Seq ExpressionCucsat.G7623
SyntenyCucsat.G7623
Gene Ontology termsGO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135569.1 zinc finger CCCH domain-containing protein 3 [Cucumis sativus]1.01e-120100Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE
        MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE

Query:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
Subjt:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

XP_008450521.1 PREDICTED: zinc finger CCCH domain-containing protein 3 [Cucumis melo]2.11e-11192.99Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP-NNNNDNTYNSSSYPMAGFP
        MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKD NQ+FPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP NN+NDNT+NSSS+P+AGFP
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP-NNNNDNTYNSSSYPMAGFP

Query:  ENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        EN QPPNVP NRFVDGNSSSTGSL+SDRLGTSWGNLPPSLMPPP+GGYPPLPFVDWG
Subjt:  ENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

XP_022931617.1 zinc finger CCCH domain-containing protein 3 [Cucurbita moschata]7.18e-8376.92Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE
        MPLGKYYCDYC+KQFQDTPFARKRHLQSLSH KAKALWFDSF+D NQ   H+F    R+CNRFL+TGFCQYGDSC YFH NNN      SSS+P+AGFPE
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE

Query:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        N Q PN+PVN+F++G SS TGSL  DRL TSWGNLPPSLMPPP+GGYPPLPFVDWG
Subjt:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

XP_022989487.1 zinc finger CCCH domain-containing protein 3 isoform X1 [Cucurbita maxima]5.06e-8378.85Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE
        MPLGKYYCDYC+KQFQDTPFARKRHLQSLSHQKAKALWFDSF+D NQ  P S  F  R+CNRFL+TGFCQYGDSCKYFH  NN      SSS P+AGFPE
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE

Query:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        N Q PNVPVN+F++G SS TGSL  DRL TSWGNLPPSLMPPP+GGYPPLPFVDWG
Subjt:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

XP_038879279.1 zinc finger CCCH domain-containing protein 3 [Benincasa hispida]1.65e-9281.76Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNN--NDNTYNSSSYPMAGF
        MPLGKYYCDYC+KQFQDTPFARKRHLQSLSHQKAKALWFDSFKD NQ   H+F  RP  CNRFL+TGFCQYGDSCKYFHPNNN  N+NT+NS+S+P+AGF
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNN--NDNTYNSSSYPMAGF

Query:  PENYQPPNVPVNRFVDGNSSSTGSLISDRLG-TSWGNLPPSLMPPPDGGYPPLPFVDWG
        PEN QPPN PVN+F DG SS TGSL+SD +G TSWGNLPPSLMPPP+GGYPPLPFVDWG
Subjt:  PENYQPPNVPVNRFVDGNSSSTGSLISDRLG-TSWGNLPPSLMPPPDGGYPPLPFVDWG

TrEMBL top hitse value%identityAlignment
A0A0A0M1B0 C3H1-type domain-containing protein4.87e-121100Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE
        MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE

Query:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
Subjt:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

A0A1S3BQ25 zinc finger CCCH domain-containing protein 31.02e-11192.99Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP-NNNNDNTYNSSSYPMAGFP
        MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKD NQ+FPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP NN+NDNT+NSSS+P+AGFP
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP-NNNNDNTYNSSSYPMAGFP

Query:  ENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        EN QPPNVP NRFVDGNSSSTGSL+SDRLGTSWGNLPPSLMPPP+GGYPPLPFVDWG
Subjt:  ENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

A0A5D3CFN3 Zinc finger CCCH domain-containing protein 31.02e-11192.99Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP-NNNNDNTYNSSSYPMAGFP
        MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKD NQ+FPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP NN+NDNT+NSSS+P+AGFP
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHP-NNNNDNTYNSSSYPMAGFP

Query:  ENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        EN QPPNVP NRFVDGNSSSTGSL+SDRLGTSWGNLPPSLMPPP+GGYPPLPFVDWG
Subjt:  ENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

A0A6J1EU59 zinc finger CCCH domain-containing protein 33.48e-8376.92Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE
        MPLGKYYCDYC+KQFQDTPFARKRHLQSLSH KAKALWFDSF+D NQ   H+F    R+CNRFL+TGFCQYGDSC YFH NNN      SSS+P+AGFPE
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE

Query:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        N Q PN+PVN+F++G SS TGSL  DRL TSWGNLPPSLMPPP+GGYPPLPFVDWG
Subjt:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

A0A6J1JFY8 zinc finger CCCH domain-containing protein 3 isoform X12.45e-8378.85Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE
        MPLGKYYCDYC+KQFQDTPFARKRHLQSLSHQKAKALWFDSF+D NQ  P S  F  R+CNRFL+TGFCQYGDSCKYFH  NN      SSS P+AGFPE
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE

Query:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        N Q PNVPVN+F++G SS TGSL  DRL TSWGNLPPSLMPPP+GGYPPLPFVDWG
Subjt:  NYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

SwissProt top hitse value%identityAlignment
Q0JP11 Zinc finger CCCH domain-containing protein 31.9e-3548.54Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFK-----DFNQSFPHSFHFRP-----RICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNS
        MPLGKYYCDYC+KQFQDTP ARKRHL    H +A+ALW+D+ +           P   H +P      +C  F+ TG C++GDSC+YFHP     N   +
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFK-----DFNQSFPHSFHFRP-----RICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNS

Query:  SSYPMAG---FPENYQ--PPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
         S P++G      N Q   PN    +  DG SS +G+++     TSWGNLPPSL PPP+GGYPP PFVDWG
Subjt:  SSYPMAG---FPENYQ--PPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

Q2TA39 Zinc finger matrin-type protein 52.0e-1631.79Show/hide
Query:  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNN--------DNTYNSSSYPMA
        +Y+CDYCD+ FQD    RK+HL  L H KAK LW+D F+D         + RP  C +FL TG C +G +C++ H +  +        +    +  +P+ 
Subjt:  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNN--------DNTYNSSSYPMA

Query:  GFPENYQPPNVPVNRFVDGNSSSTGSLISDR----------LGTSW---GNLPPSLMPPPDGGYPPLPFVDWG
           +  + P V +  +++  +    S  S R              W     LPPSL  PP GG+P  P V WG
Subjt:  GFPENYQPPNVPVNRFVDGNSSSTGSLISDR----------LGTSW---GNLPPSLMPPPDGGYPPLPFVDWG

Q6AXL8 Zinc finger matrin-type protein 54.6e-1328.49Show/hide
Query:  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYN---SSSYPMAGFPEN
        +YYCDYCD+ FQD    RK+HL  + H +AK  WFD+F+D       +      +C +F+ TG C +G SC++ H +                    P+ 
Subjt:  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYN---SSSYPMAGFPEN

Query:  YQPPNVPVNRFVDGNSSSTGSLISDRL-----------------GTSWGNLPPSLMPPPDGGYPPLPFVDWG
               V+ ++        +L S R+                   S  +LPPSL PPP GG+      +WG
Subjt:  YQPPNVPVNRFVDGNSSSTGSLISDRL-----------------GTSWGNLPPSLMPPPDGGYPPLPFVDWG

Q9CQR5 Zinc finger matrin-type protein 56.4e-1530.64Show/hide
Query:  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNN--------DNTYNSSSYPMA
        +Y+CDYCD+ FQD    RK+HL  L H KAK +W+D F+D         + RP  C +FL TG C +G +C++ H +  +        +    +  +P+ 
Subjt:  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNN--------DNTYNSSSYPMA

Query:  GFPENYQPPNVPVNRFVDGNSSSTGSLISDR----------LGTSW---GNLPPSLMPPPDGGYPPLPFVDWG
           E  + P   +  +++  +    S  S R              W     LPPSL  PP GG+  L  V WG
Subjt:  GFPENYQPPNVPVNRFVDGNSSSTGSLISDR----------LGTSW---GNLPPSLMPPPDGGYPPLPFVDWG

Q9UDW3 Zinc finger matrin-type protein 54.9e-1533.14Show/hide
Query:  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE-NYQ
        +Y+CDYCD+ FQD    RK+HL  L H KAK +W+D F+D         + RP  C +FL TG C +G +C++ H +  +    +          E    
Subjt:  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPE-NYQ

Query:  PPNVPVNRFVD------GNSSSTGSLISDRLGTS-------W---GNLPPSLMPPPDGGYPPLPFVDWG
         P +P     D         SS  S  ++ + T+       W     LPPSL  PP GG+P  P V WG
Subjt:  PPNVPVNRFVD------GNSSSTGSLISDRLGTS-------W---GNLPPSLMPPPDGGYPPLPFVDWG

Arabidopsis top hitse value%identityAlignment
AT5G26749.1 C2H2 and C2HC zinc fingers superfamily protein1.6e-3749.68Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR-ICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFP
        MP GKYYCDYC+K+FQDT  ARKRHLQS  H +AKALW+ S    +   P   +F  + +CNRF+++ FC +GDSC+YFHPNNN  +T         GF 
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR-ICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFP

Query:  ENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
         N Q     +N+     S+     +S R GT W +LPPSL PPP+ GYP LPF+DWG
Subjt:  ENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG

AT5G26749.2 C2H2 and C2HC zinc fingers superfamily protein4.9e-3444.32Show/hide
Query:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR-ICNRFLST-------------------GFCQYGDSCKYFHP
        MP GKYYCDYC+K+FQDT  ARKRHLQS  H +AKALW+ S    +   P   +F  + +CNRF+++                    FC +GDSC+YFHP
Subjt:  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR-ICNRFLST-------------------GFCQYGDSCKYFHP

Query:  NNNNDNTYNSSSYPMAGFPENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG
        NNN  +T         GF  N Q     +N+     S+     +S R GT W +LPPSL PPP+ GYP LPF+DWG
Subjt:  NNNNDNTYNSSSYPMAGFPENYQPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTGGGAAAATATTATTGCGACTACTGCGATAAGCAATTTCAAGACACTCCCTTTGCTCGAAAACGCCATCTTCAAAGTCTCTCTCATCAGAAGGCCAAAGCTCT
TTGGTTCGACTCCTTCAAAGATTTCAATCAATCTTTCCCTCATTCCTTCCACTTCCGACCACGCATCTGTAATCGATTCCTCTCTACGGGGTTTTGCCAATACGGCGATT
CTTGTAAATATTTTCACCCCAATAACAACAATGACAATACGTACAACTCCAGTTCCTACCCTATGGCAGGTTTCCCGGAAAATTATCAACCCCCAAATGTTCCGGTTAAT
CGATTTGTAGACGGCAACTCTTCTTCCACAGGTAGTTTAATTAGCGATAGACTGGGAACATCATGGGGAAATTTACCTCCATCACTGATGCCTCCTCCAGACGGTGGATA
CCCACCTCTTCCTTTCGTAGATTGGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTGGGAAAATATTATTGCGACTACTGCGATAAGCAATTTCAAGACACTCCCTTTGCTCGAAAACGCCATCTTCAAAGTCTCTCTCATCAGAAGGCCAAAGCTCT
TTGGTTCGACTCCTTCAAAGATTTCAATCAATCTTTCCCTCATTCCTTCCACTTCCGACCACGCATCTGTAATCGATTCCTCTCTACGGGGTTTTGCCAATACGGCGATT
CTTGTAAATATTTTCACCCCAATAACAACAATGACAATACGTACAACTCCAGTTCCTACCCTATGGCAGGTTTCCCGGAAAATTATCAACCCCCAAATGTTCCGGTTAAT
CGATTTGTAGACGGCAACTCTTCTTCCACAGGTAGTTTAATTAGCGATAGACTGGGAACATCATGGGGAAATTTACCTCCATCACTGATGCCTCCTCCAGACGGTGGATA
CCCACCTCTTCCTTTCGTAGATTGGGGATAA
Protein sequenceShow/hide protein sequence
MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRICNRFLSTGFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPENYQPPNVPVN
RFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG