CuGenDBv2

Gene ID	Cucsat.G7652
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	SWIM-type domain-containing protein
Genome location	ctg1528:5592701..5594136
RNA-Seq Expression	Cucsat.G7652
Synteny	Cucsat.G7652
Gene Ontology terms	GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008450515.1 PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo]

1.18e-104

93.16

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Query:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF
        +S  RKTAVVLLCAAKIAS SM KA IVARADAERKVREAAMARKRAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERNR LGPTVKAENAF
Subjt:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF

Query:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
        E+PAVSTLNTG+ALTQRRESLNGFVRQMSMVKNE AASMEESARHKNVEVAERLQSNN IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
Subjt:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK

XP_011659447.1 uncharacterized protein LOC105436183 [Cucumis sativus]

8.18e-110

97.89

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Query:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF
        +S  RKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF
Subjt:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF

Query:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
        EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
Subjt:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK

XP_022961460.1 uncharacterized protein LOC111462036, partial [Cucurbita moschata]

1.88e-86

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Query:  VYGFFFLLSIT-SLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREA
        V GF F+L I  SL+E PSSSSS+ +     Q+A+GVW+LRLSRS+DS+S S+TRKTAVVLLCAAKIASASM KAVIVARADAERKVRE A+ARKRAREA
Subjt:  VYGFFFLLSIT-SLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREA

Query:  LEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEV
        LEHVGF++ARERARRKEEAS+EVSGSGN+  K+KERNR LG  VK EN+ E PAV TLNTG+ LTQRRESLNGFVRQMSMVKNEAAAS++E+A       
Subjt:  LEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEV

Query:  AERLQSNNIGLLNEKEKNENGEVEHVKNDH
        A+RL+SNN          +NG+VE+V+NDH
Subjt:  AERLQSNNIGLLNEKEKNENGEVEHVKNDH

XP_022968844.1 uncharacterized protein LOC111467980, partial [Cucurbita maxima]

4.90e-87

70.26

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Query:  GFFFLLSI-TSLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALE
        GF F+L I  SL+E PSSSSS+    S  Q+A+GVW+LRLSRS+DS+S S+TRKTAVVLLCAAKIASASM KAVIVARADAERKVRE A+ARKRAREALE
Subjt:  GFFFLLSI-TSLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALE

Query:  HVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAE
        HVGF++ARERARRKEEAS+EVSGSGN+ +K+KERNR LG  VK EN+ E PAV TLNT +ALTQRRESLNGFVRQMSMVKNEAAAS++E+A       A+
Subjt:  HVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAE

Query:  RLQSNNIGLLNEKEKN----ENGEVEHVKNDH
        RLQ NN    +EKEK+    +N + E+V+NDH
Subjt:  RLQSNNIGLLNEKEKN----ENGEVEHVKNDH

XP_023515910.1 uncharacterized protein LOC111779938, partial [Cucurbita pepo subsp. pepo]

4.29e-88

70.56

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Query:  GFFFLLSITSLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEH
        GFFF     SL+E  SSSSS+ +     Q+A+GVW+LRLSRS+DS+S S+TRKTAVVLLCAAKIASASM KAVIVARADAERKVRE A+ARKRAREALEH
Subjt:  GFFFLLSITSLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEH

Query:  VGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAER
        VGF++ARERARRKEEAS+EVSGSGN+ +K+KERNR LG  VK EN+ E PAV TLNTG+ LTQRRESLNGFVRQMSMVKNEAAAS++E+A       A+R
Subjt:  VGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAER

Query:  LQSNNIGLLNEKEKN----ENGEVEHVKNDH
        LQSNN    +EKEK+    +NG+VE+V+NDH
Subjt:  LQSNNIGLLNEKEKN----ENGEVEHVKNDH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYS3 Uncharacterized protein

3.96e-110

97.89

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Query:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF
        +S  RKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF
Subjt:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF

Query:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
        EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
Subjt:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK

A0A1S3BQ20 uncharacterized protein LOC103492096

5.74e-105

93.16

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Query:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF
        +S  RKTAVVLLCAAKIAS SM KA IVARADAERKVREAAMARKRAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERNR LGPTVKAENAF
Subjt:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF

Query:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
        E+PAVSTLNTG+ALTQRRESLNGFVRQMSMVKNE AASMEESARHKNVEVAERLQSNN IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
Subjt:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK

A0A5D3CEV9 Putative DNA binding protein

5.74e-105

93.16

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Query:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF
        +S  RKTAVVLLCAAKIAS SM KA IVARADAERKVREAAMARKRAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERNR LGPTVKAENAF
Subjt:  RSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAF

Query:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
        E+PAVSTLNTG+ALTQRRESLNGFVRQMSMVKNE AASMEESARHKNVEVAERLQSNN IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK
Subjt:  EMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNN-IGLLNEKEKNENGEVEHVKNDHIGGTVNTTK

A0A6J1HCA2 uncharacterized protein LOC111462036

9.11e-87

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Query:  VYGFFFLLSIT-SLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREA
        V GF F+L I  SL+E PSSSSS+ +     Q+A+GVW+LRLSRS+DS+S S+TRKTAVVLLCAAKIASASM KAVIVARADAERKVRE A+ARKRAREA
Subjt:  VYGFFFLLSIT-SLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREA

Query:  LEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEV
        LEHVGF++ARERARRKEEAS+EVSGSGN+  K+KERNR LG  VK EN+ E PAV TLNTG+ LTQRRESLNGFVRQMSMVKNEAAAS++E+A       
Subjt:  LEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEV

Query:  AERLQSNNIGLLNEKEKNENGEVEHVKNDH
        A+RL+SNN          +NG+VE+V+NDH
Subjt:  AERLQSNNIGLLNEKEKNENGEVEHVKNDH

A0A6J1I0U4 uncharacterized protein LOC111467980

2.37e-87

70.26

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Query:  GFFFLLSI-TSLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALE
        GF F+L I  SL+E PSSSSS+    S  Q+A+GVW+LRLSRS+DS+S S+TRKTAVVLLCAAKIASASM KAVIVARADAERKVRE A+ARKRAREALE
Subjt:  GFFFLLSI-TSLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALE

Query:  HVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAE
        HVGF++ARERARRKEEAS+EVSGSGN+ +K+KERNR LG  VK EN+ E PAV TLNT +ALTQRRESLNGFVRQMSMVKNEAAAS++E+A       A+
Subjt:  HVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAE

Query:  RLQSNNIGLLNEKEKN----ENGEVEHVKNDH
        RLQ NN    +EKEK+    +N + E+V+NDH
Subjt:  RLQSNNIGLLNEKEKN----ENGEVEHVKNDH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G09520.1 LOCATED IN: chloroplast

2.7e-07

33.1

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Query:  DSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKA
        ++ SR   +  +   LCAAKIA++SM KAV+ A+ + +R+ +EAA+A+KRAREALE V  + A+E+AR       E        +       T+  T  +
Subjt:  DSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKA

Query:  ENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAAS
        +        +T N G    Q   +      Q++ VK EA AS
Subjt:  ENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAAS

Sequences

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CDS sequence

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TCAATTCTTTACCTTGTTTACGGTTTTTTTTTTCTTCTTTCTATTACGTCTCTCAATGAACCACCCTCCTCTTCCTCCTCCACCTTCCACTCCAAATCCCCCTACCAAAA
TGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTG
CATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTT
GTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTAC
GGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAA
TGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACATTGGTTTATTAAATGAGAAGGAG
AAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAG

mRNA sequence

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Protein sequence

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SILYLVYGFFFLLSITSLNEPPSSSSSTFHSKSPYQNAEGVWKLRLSRSMDSASRSYTRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGF
VVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNIGLLNEKE
KNENGEVEHVKNDHIGGTVNTTK

Cucsat.G7652 (gene) of Cucumber (B10) v3 genome