; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7669 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7669
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionE3 ubiquitin-protein ligase RGLG3-like
Genome locationctg1544:449558..452998
RNA-Seq ExpressionCucsat.G7669
SyntenyCucsat.G7669
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025200.1 E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa]5.45e-3865.81Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR
        MSES +ASKKEAAFALAALMEIPFQY+ATLSLPNSKRE++YGKSA PLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESV  +       + +      
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR

Query:  MREPNMCGFTITLGKLC
         ++   CG TI+   LC
Subjt:  MREPNMCGFTITLGKLC

KAE8647047.1 hypothetical protein Csa_022918 [Cucumis sativus]4.39e-4996.55Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSLLFY
        MSESTEASKKEAAFALAALMEIPFQY+ATLSLPNSKRE+VYGKSA PLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSLLFY
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSLLFY

TYK07466.1 E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa]5.30e-3865.81Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR
        MSES +ASKKEAAFALAALMEIPFQY+ATLSLPNSKRE++YGKSA PLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESV  +       + +      
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR

Query:  MREPNMCGFTITLGKLC
         ++   CG TI+   LC
Subjt:  MREPNMCGFTITLGKLC

XP_031739618.1 E3 ubiquitin-protein ligase RGLG3-like [Cucumis sativus]1.23e-4089.41Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSK----RETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESV
        MSES EASKKEAAFALA LMEIPFQY+ATLSLPNSK    RE+VYGKSA PLPPPPEVINYDNAVANQILENAKAEKHSSSSESV
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSK----RETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESV

XP_031743945.1 E3 ubiquitin-protein ligase RGLG3 isoform X1 [Cucumis sativus]1.11e-4070.09Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR
        MSESTEASKKEAAFALAALMEIPFQY+ATLSLPNSKRE+VYGKSA PLPPPPEVIN+DNAVANQILEN+KAEKHSSSSESV  +       + +      
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR

Query:  MREPNMCGFTITLGKLC
         ++   CG TI+   LC
Subjt:  MREPNMCGFTITLGKLC

TrEMBL top hitse value%identityAlignment
A0A1S3CHE4 E3 ubiquitin-protein ligase RGLG1 isoform X23.77e-3765.81Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR
        MSES +ASKKEAAFALAALMEIPFQY+ATLSLPNSKRE++YGKSA PLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESV  +       + +      
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR

Query:  MREPNMCGFTITLGKLC
         ++   CG TI+   LC
Subjt:  MREPNMCGFTITLGKLC

A0A1S3CHF5 E3 ubiquitin-protein ligase RGLG1 isoform X15.41e-3765.81Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR
        MSES +ASKKEAAFALAALMEIPFQY+ATLSLPNSKRE++YGKSA PLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESV  +       + +      
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR

Query:  MREPNMCGFTITLGKLC
         ++   CG TI+   LC
Subjt:  MREPNMCGFTITLGKLC

A0A5A7SGD8 E3 ubiquitin-protein ligase RGLG1 isoform X12.64e-3865.81Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR
        MSES +ASKKEAAFALAALMEIPFQY+ATLSLPNSKRE++YGKSA PLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESV  +       + +      
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR

Query:  MREPNMCGFTITLGKLC
         ++   CG TI+   LC
Subjt:  MREPNMCGFTITLGKLC

A0A5D3CAU1 E3 ubiquitin-protein ligase RGLG1 isoform X12.57e-3865.81Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR
        MSES +ASKKEAAFALAALMEIPFQY+ATLSLPNSKRE++YGKSA PLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESV  +       + +      
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR

Query:  MREPNMCGFTITLGKLC
         ++   CG TI+   LC
Subjt:  MREPNMCGFTITLGKLC

A0A6J1KVY2 E3 ubiquitin-protein ligase RGLG3-like isoform X25.79e-3160.68Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR
        MSES E SKKEAAFALAALMEIPFQY+ATLSL  SKRE+VY KSA P+PPPPEVIN+DNAVANQ L  A AE+ SSSSESV  +       + +      
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSL-------LFYLWSFLR

Query:  MREPNMCGFTITLGKLC
         ++   CG TI+   LC
Subjt:  MREPNMCGFTITLGKLC

SwissProt top hitse value%identityAlignment
Q8LB88 E3 ubiquitin-protein ligase RGLG52.8e-0438.75Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MS++ + ++KEA FAL+ALMEIP QYKATL L    + T +      LPPP          A Q + N+     S+S ++
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

Q8RX26 E3 ubiquitin-protein ligase RGLG31.5e-1347.11Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVTSL-------LFYLW
        MSE  +A+KKEAAFALAALMEIPFQYKATLSL N K      +  +PLPPPPEVI  DNA   V NQ+ E A K+++ + S+  V  +       + +  
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVTSL-------LFYLW

Query:  SFLRMREPNMCGFTITLGKLC
             +E   CG  IT   LC
Subjt:  SFLRMREPNMCGFTITLGKLC

Q9LY87 E3 ubiquitin-protein ligase RGLG28.0e-0450.98Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPP
        M+++   S KE  FAL+ALMEIP QYKAT+ L    R   Y     PLPPP
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPP

Q9SAL0 E3 ubiquitin-protein ligase RGLG45.6e-0538.55Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTS
        M+ ++  S KE AFALAALMEIPFQY+A + L    ++T   K+  P PPP       NA        A  E+  S    +T+
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTS

Arabidopsis top hitse value%identityAlignment
AT1G67800.1 Copine (Calcium-dependent phospholipid-binding protein) family2.0e-0538.75Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MS++ + ++KEA FAL+ALMEIP QYKATL L    + T +      LPPP          A Q + N+     S+S ++
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

AT1G67800.2 Copine (Calcium-dependent phospholipid-binding protein) family2.0e-0538.75Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MS++ + ++KEA FAL+ALMEIP QYKATL L    + T +      LPPP          A Q + N+     S+S ++
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

AT1G79380.1 Ca(2)-dependent phospholipid-binding protein (Copine) family3.9e-0638.55Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTS
        M+ ++  S KE AFALAALMEIPFQY+A + L    ++T   K+  P PPP       NA        A  E+  S    +T+
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTS

AT5G63970.1 Copine (Calcium-dependent phospholipid-binding protein) family1.0e-1447.11Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVTSL-------LFYLW
        MSE  +A+KKEAAFALAALMEIPFQYKATLSL N K      +  +PLPPPPEVI  DNA   V NQ+ E A K+++ + S+  V  +       + +  
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVTSL-------LFYLW

Query:  SFLRMREPNMCGFTITLGKLC
             +E   CG  IT   LC
Subjt:  SFLRMREPNMCGFTITLGKLC

AT5G63970.2 Copine (Calcium-dependent phospholipid-binding protein) family1.0e-1447.11Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVTSL-------LFYLW
        MSE  +A+KKEAAFALAALMEIPFQYKATLSL N K      +  +PLPPPPEVI  DNA   V NQ+ E A K+++ + S+  V  +       + +  
Subjt:  MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVTSL-------LFYLW

Query:  SFLRMREPNMCGFTITLGKLC
             +E   CG  IT   LC
Subjt:  SFLRMREPNMCGFTITLGKLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAGCACAGAAGCGTCAAAGAAGGAAGCAGCATTTGCCTTGGCCGCACTCATGGAAATTCCATTTCAATACAAAGCTACCCTCTCCTTGCCAAATTCAAAGAG
AGAAACTGTATATGGAAAAAGTGCAAGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAAC
ATAGTTCCTCATCTGAATCGGTAACTTCGCTTTTATTTTATTTATGGAGTTTTCTAAGAATGAGAGAACCAAACATGTGTGGCTTTACAATTACTCTAGGAAAGTTGTGT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGAGCACAGAAGCGTCAAAGAAGGAAGCAGCATTTGCCTTGGCCGCACTCATGGAAATTCCATTTCAATACAAAGCTACCCTCTCCTTGCCAAATTCAAAGAG
AGAAACTGTATATGGAAAAAGTGCAAGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAAC
ATAGTTCCTCATCTGAATCGGTAACTTCGCTTTTATTTTATTTATGGAGTTTTCTAAGAATGAGAGAACCAAACATGTGTGGCTTTACAATTACTCTAGGAAAGTTGTGT
TGA
Protein sequenceShow/hide protein sequence
MSESTEASKKEAAFALAALMEIPFQYKATLSLPNSKRETVYGKSARPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVTSLLFYLWSFLRMREPNMCGFTITLGKLC