; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7707 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7707
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationctg1546:36738..39017
RNA-Seq ExpressionCucsat.G7707
SyntenyCucsat.G7707
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047513.1 hypothetical protein E6C27_scaffold498G001420 [Cucumis melo var. makuwa]3.65e-6173.53Show/hide
Query:  MSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDII
        MS+PQPLF EYSVDRNHIS +SL   ++AL++ +TFA LNI ++E+QNKI LTFE SSPSTLPLNRELTFVVPMEDWS   V FDGK+FSIES+LF DII
Subjt:  MSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDII

Query:  QLFSSFTEANTILIASFGSKVSFSILPFAETPLTEE
        QLFS+F EA+ ILI +FGSKV+FS+ PFAETPLTEE
Subjt:  QLFSSFTEANTILIASFGSKVSFSILPFAETPLTEE

KAE8652085.1 hypothetical protein Csa_018729, partial [Cucumis sativus]5.72e-9899.32Show/hide
Query:  PSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFGDREIETQIQMPLLP
        PSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFGDREIETQIQMPLLP
Subjt:  PSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFGDREIETQIQMPLLP

Query:  SSFFSNCVLQSRRVWFFQSPDSSCTFIHFPFQVYPHFLVICIPFQIV
        SSFFSNCVLQS+RVWFFQSPDSSCTFIHFPFQVYPHFLVICIPFQIV
Subjt:  SSFFSNCVLQSRRVWFFQSPDSSCTFIHFPFQVYPHFLVICIPFQIV

KGN45637.1 hypothetical protein Csa_005027 [Cucumis sativus]8.32e-5355.9Show/hide
Query:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI
        MFSIKID +DP LDA  LF ++ +D+ICLKF  ST SII RY+ P FF  + +P+PLF EY V R+HI R+SLLS ++AL   QT+++L IHLQE+QN I
Subjt:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI

Query:  LLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANT
         L FEPS  S +P+ R++ F VPMEDWS  +++FD K FSIES LF DII  F  + E +T
Subjt:  LLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANT

TYK26483.1 hypothetical protein E5676_scaffold313G00490 [Cucumis melo var. makuwa]6.21e-5773.53Show/hide
Query:  MSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDII
        MS+PQPLF EYSVDRNHIS +SL   ++AL++ +TFA LNI ++E+QNKI LTFE SSPSTLPLNRELTFVVPMEDWS   V FDGK+FSIES+LF DII
Subjt:  MSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDII

Query:  QLFSSFTEANTILIASFGSKVSFSILPFAETPLTEE
        QLFS+F EA+ ILI +FGSKV+FS+ PFAETPLTEE
Subjt:  QLFSSFTEANTILIASFGSKVSFSILPFAETPLTEE

XP_031736681.1 uncharacterized protein LOC116402062 [Cucumis sativus]2.03e-17899.61Show/hide
Query:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI
        MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI
Subjt:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI

Query:  LLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFGDREIET
        LLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFGDREIET
Subjt:  LLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFGDREIET

Query:  QIQMPLLPSSFFSNCVLQSRRVWFFQSPDSSCTFIHFPFQVYPHFLVICIPFQIV
        QIQMPLLPSSFFSNCVLQS+RVWFFQSPDSSCTFIHFPFQVYPHFLVICIPFQIV
Subjt:  QIQMPLLPSSFFSNCVLQSRRVWFFQSPDSSCTFIHFPFQVYPHFLVICIPFQIV

TrEMBL top hitse value%identityAlignment
A0A0A0KB76 Uncharacterized protein4.03e-5355.9Show/hide
Query:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI
        MFSIKID +DP LDA  LF ++ +D+ICLKF  ST SII RY+ P FF  + +P+PLF EY V R+HI R+SLLS ++AL   QT+++L IHLQE+QN I
Subjt:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI

Query:  LLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANT
         L FEPS  S +P+ R++ F VPMEDWS  +++FD K FSIES LF DII  F  + E +T
Subjt:  LLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANT

A0A0A0LIE0 Uncharacterized protein1.26e-4060.63Show/hide
Query:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI
        MFSIK+D++DPFLDAT LF E  +DEICLKF PST S+I RY+CP FF  + +P PLFVEYSVDRNHISRISL  F +ALLE Q++++++IHL+E QN I
Subjt:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI

Query:  LLTFEPSSPSTLPLNRELTF-VVPMED
        L  FEPS   T     ++TF  VP E+
Subjt:  LLTFEPSSPSTLPLNRELTF-VVPMED

A0A1S3CL88 uncharacterized protein LOC1035022503.11e-3335.27Show/hide
Query:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI
        MF +K+ + DP LDAT   A+++ D   LKF PS   II  +  P F  T+ L    F  +SVD +H S++SL SF+ A+L+  +FA++ IHL +  N++
Subjt:  MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKI

Query:  LLTFEPSSPSTLPLNRELTFVVPM-EDWSTAQVNFDG-KVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFG-DRE
        +L F+  S    PL+ ELT   P  ED    Q   D  K F ++S+    II+    F   + I +    S+V FSI   ++  +  E   C I G + E
Subjt:  LLTFEPSSPSTLPLNRELTFVVPM-EDWSTAQVNFDG-KVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFG-DRE

Query:  IETQIQMPLLPSSFFSNCVLQSRRVWFFQSPDSSCTFIHFP
        +ETQ Q+ L P  FF N   ++ RVWF+++ +++ T +  P
Subjt:  IETQIQMPLLPSSFFSNCVLQSRRVWFFQSPDSSCTFIHFP

A0A5A7TVD7 Uncharacterized protein1.77e-6173.53Show/hide
Query:  MSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDII
        MS+PQPLF EYSVDRNHIS +SL   ++AL++ +TFA LNI ++E+QNKI LTFE SSPSTLPLNRELTFVVPMEDWS   V FDGK+FSIES+LF DII
Subjt:  MSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDII

Query:  QLFSSFTEANTILIASFGSKVSFSILPFAETPLTEE
        QLFS+F EA+ ILI +FGSKV+FS+ PFAETPLTEE
Subjt:  QLFSSFTEANTILIASFGSKVSFSILPFAETPLTEE

A0A5D3DSC2 Uncharacterized protein3.01e-5773.53Show/hide
Query:  MSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDII
        MS+PQPLF EYSVDRNHIS +SL   ++AL++ +TFA LNI ++E+QNKI LTFE SSPSTLPLNRELTFVVPMEDWS   V FDGK+FSIES+LF DII
Subjt:  MSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPSTLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDII

Query:  QLFSSFTEANTILIASFGSKVSFSILPFAETPLTEE
        QLFS+F EA+ ILI +FGSKV+FS+ PFAETPLTEE
Subjt:  QLFSSFTEANTILIASFGSKVSFSILPFAETPLTEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCTATCAAGATTGATGACATTGATCCTTTCTTAGATGCAACCATCCTGTTTGCTGAACTTACACACGATGAAATCTGCCTAAAGTTCTTGCCCTCAACTATGTC
CATAATTGTTCGCTACGAATGCCCTATTTTCTTTGTAACCATGTCTCTGCCGCAACCCTTATTCGTCGAGTATTCCGTTGATCGGAACCACATTTCAAGGATTTCCCTCC
TGTCCTTTTACAGTGCTTTGCTTGAATGCCAAACTTTTGCTGCATTGAACATCCATCTTCAGGAAGACCAGAATAAAATATTGCTTACATTTGAGCCTTCAAGTCCATCA
ACATTACCATTGAACCGTGAATTGACATTCGTCGTGCCTATGGAAGATTGGTCTACTGCACAAGTTAACTTTGATGGAAAAGTTTTCTCCATTGAGTCACAACTGTTTAT
CGATATTATCCAACTATTTTCTTCCTTCACTGAAGCTAATACAATTTTGATTGCTTCATTTGGTTCAAAAGTCTCCTTCTCAATTCTTCCATTTGCAGAGACACCTCTTA
CCGAAGAGAGTGGAACATGTTTGATTTTTGGTGATAGAGAAATCGAAACTCAAATACAAATGCCACTTCTTCCATCCTCATTTTTCAGTAATTGTGTACTTCAATCTCGA
AGGGTATGGTTCTTCCAATCACCTGATTCTTCTTGTACATTCATTCATTTCCCTTTTCAAGTTTATCCTCATTTTTTGGTGATCTGTATCCCTTTCCAAATTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCTATCAAGATTGATGACATTGATCCTTTCTTAGATGCAACCATCCTGTTTGCTGAACTTACACACGATGAAATCTGCCTAAAGTTCTTGCCCTCAACTATGTC
CATAATTGTTCGCTACGAATGCCCTATTTTCTTTGTAACCATGTCTCTGCCGCAACCCTTATTCGTCGAGTATTCCGTTGATCGGAACCACATTTCAAGGATTTCCCTCC
TGTCCTTTTACAGTGCTTTGCTTGAATGCCAAACTTTTGCTGCATTGAACATCCATCTTCAGGAAGACCAGAATAAAATATTGCTTACATTTGAGCCTTCAAGTCCATCA
ACATTACCATTGAACCGTGAATTGACATTCGTCGTGCCTATGGAAGATTGGTCTACTGCACAAGTTAACTTTGATGGAAAAGTTTTCTCCATTGAGTCACAACTGTTTAT
CGATATTATCCAACTATTTTCTTCCTTCACTGAAGCTAATACAATTTTGATTGCTTCATTTGGTTCAAAAGTCTCCTTCTCAATTCTTCCATTTGCAGAGACACCTCTTA
CCGAAGAGAGTGGAACATGTTTGATTTTTGGTGATAGAGAAATCGAAACTCAAATACAAATGCCACTTCTTCCATCCTCATTTTTCAGTAATTGTGTACTTCAATCTCGA
AGGGTATGGTTCTTCCAATCACCTGATTCTTCTTGTACATTCATTCATTTCCCTTTTCAAGTTTATCCTCATTTTTTGGTGATCTGTATCCCTTTCCAAATTGTGTAA
Protein sequenceShow/hide protein sequence
MFSIKIDDIDPFLDATILFAELTHDEICLKFLPSTMSIIVRYECPIFFVTMSLPQPLFVEYSVDRNHISRISLLSFYSALLECQTFAALNIHLQEDQNKILLTFEPSSPS
TLPLNRELTFVVPMEDWSTAQVNFDGKVFSIESQLFIDIIQLFSSFTEANTILIASFGSKVSFSILPFAETPLTEESGTCLIFGDREIETQIQMPLLPSSFFSNCVLQSR
RVWFFQSPDSSCTFIHFPFQVYPHFLVICIPFQIV