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Cucsat.G7721 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7721
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description60S ribosomal protein L30-like
Genome locationctg1546:578148..579494
RNA-Seq ExpressionCucsat.G7721
SyntenyCucsat.G7721
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000231 - Ribosomal protein L30e
IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR022991 - Ribosomal protein L30e, conserved site
IPR029064 - 50S ribosomal protein L30e-like
IPR039109 - Ribosomal protein L30/YlxQ


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHT34863.1 60S ribosomal protein L30 [Capsicum baccatum]4.38e-6790.65Show/hide
Query:  LQKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDII
        +QKKTHESINNRLALVMKSGKYTLGYKTVL+T+R SKGKLII++NNCPPLRKSEIEYYAMLAK+GVHHYNG+NVDLGTACGKYYRV CLSIIDPGDSDII
Subjt:  LQKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDII

Query:  KSLPGDQ
        KS+PGDQ
Subjt:  KSLPGDQ

XP_004140311.1 60S ribosomal protein L30 [Cucumis sativus]4.59e-70100Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

XP_008460497.1 PREDICTED: 60S ribosomal protein L30-like [Cucumis melo]3.77e-6999.05Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

XP_022141723.1 60S ribosomal protein L30-like [Momordica charantia]2.18e-6897.14Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

XP_022952815.1 60S ribosomal protein L30-like [Cucurbita moschata]7.30e-6795.24Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LP +Q
Subjt:  LPGDQ

TrEMBL top hitse value%identityAlignment
A0A0A0KQ98 Ribosomal_L7Ae domain-containing protein2.22e-70100Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

A0A1S3CCQ4 60S ribosomal protein L30-like1.83e-6999.05Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

A0A5D3DSZ7 60S ribosomal protein L30-like1.83e-6999.05Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

A0A6J1FH91 60S ribosomal protein L30-like1.83e-6999.05Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

A0A6J1JWW8 60S ribosomal protein L30-like1.83e-6999.05Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

SwissProt top hitse value%identityAlignment
O49884 60S ribosomal protein L303.5e-5289.52Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESINNRLALVMKSGKYTLGYKTVL+++R SKGKLII++NNCPPLRKSEIEYYAMLAK+GVHHYNG+NVDLGTACGKYYRV CLSI+DPGDSDIIK+
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

Q8VZ19 60S ribosomal protein L30-23.3e-5084.76Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KK+HE IN+RLALVMKSGKYTLGYK+VL+++RGSKGKLI++S NCPPLR+SEIEYYAMLAK+GVHHYNG+NVDLGTACGKY+RVSCLSI+DPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        +PGDQ
Subjt:  LPGDQ

Q9C8F7 Putative 60S ribosomal protein L30-16.2e-4983.81Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEIEYYAMLAK+GVHHYN +NVDLGTACGKY+RVSCLSI+DPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

Q9LSA3 60S ribosomal protein L30-31.4e-4882.86Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEIEYYAMLAK+GVH YNG+NVDLGTACGKY+RVSCLSI+DPGDSDIIK+
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

Q9M5M6 60S ribosomal protein L308.1e-4985.58Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KKTHESIN+RLALVMKSGK+TLGYKTVL ++R +KGKLII++NNCPPLRKSEIEYYAMLAK+GVHHYNG+NVDLGTACGKY+RV CLSIID GDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGD
        +PGD
Subjt:  LPGD

Arabidopsis top hitse value%identityAlignment
AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.4e-5083.81Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEIEYYAMLAK+GVHHYN +NVDLGTACGKY+RVSCLSI+DPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ

AT1G77940.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein2.3e-5184.76Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KK+HE IN+RLALVMKSGKYTLGYK+VL+++RGSKGKLI++S NCPPLR+SEIEYYAMLAK+GVHHYNG+NVDLGTACGKY+RVSCLSI+DPGDSDIIKS
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        +PGDQ
Subjt:  LPGDQ

AT3G18740.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein9.8e-5082.86Show/hide
Query:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS
        KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEIEYYAMLAK+GVH YNG+NVDLGTACGKY+RVSCLSI+DPGDSDIIK+
Subjt:  KKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKS

Query:  LPGDQ
        LPGDQ
Subjt:  LPGDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGGCGCCGGCGAAGAAGACCGTAAGTATCACTCTAATCTCGCACTTCCATTTAGTTTATGGATACTGGTTTTTGATGATTTTGATGATCTTTGGTGTTGTAATTTGCA
GAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGGA
AGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAATGTTGAT
CTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGA
mRNA sequenceShow/hide mRNA sequence
GATGGCGCCGGCGAAGAAGACCGTAAGTATCACTCTAATCTCGCACTTCCATTTAGTTTATGGATACTGGTTTTTGATGATTTTGATGATCTTTGGTGTTGTAATTTGCA
GAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGGA
AGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAATGTTGAT
CTTGGAACTGCTTGTGGCAAGTATTACCGTGTCTCCTGCCTTAGCATTATCGATCCAGGTGATTCTGATATTATCAAATCGCTTCCCGGTGATCAGTGA
Protein sequenceShow/hide protein sequence
DGAGEEDRKYHSNLALPFSLWILVFDDFDDLWCCNLQKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSNVD
LGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ