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Cucsat.G7949 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7949
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosome biogenesis protein
Genome locationctg1556:210107..215608
RNA-Seq ExpressionCucsat.G7949
SyntenyCucsat.G7949
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030686 - 90S preribosome (cellular component)
GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037498.1 putative ribosome biogenesis protein slx9-like [Cucumis melo var. makuwa]8.15e-9496.2Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
        MGKPVSRSDVKSKAERKFEKKVQFYERVGE+I TLNAQK+ITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG

Query:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        TVLNHPVFQADPLRAVQLHLEGTQP EEPKKKKMNKNGSKKRKEKK KASA+PSSMEM
Subjt:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
KAA0062508.1 putative ribosome biogenesis protein slx9-like [Cucumis melo var. makuwa]5.52e-8694.77Show/hide
Query:  SRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNH
        ++SDVKSKAERKFEKKVQFYERVGE+I TLNAQK+ITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNH
Subjt:  SRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNH

Query:  PVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        PVFQADPLRAVQLHLEGTQPIEEPKKKK+NKNGSKKRKEKKSKA A+PSSMEM
Subjt:  PVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
XP_004144346.1 putative ribosome biogenesis protein slx9-like [Cucumis sativus]2.54e-9799.37Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
        MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQK+ITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG

Query:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
Subjt:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
XP_038883686.1 putative ribosome biogenesis protein slx9-like isoform X1 [Benincasa hispida]9.04e-8489.24Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
        MGKPVSRSD KSKAERKFEKKVQFYERVGETI+TLNAQK I+KKK++RRRKRDLKAFDLS LSEFLPGL A KQKPSAAE KLNCKSRLKF+LKERKQM 
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG

Query:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        TVLNHPVFQADPLRA++LHLEGTQPIEEPKKKK NKNGSKKRKEKKS ASA+PSSMEM
Subjt:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
XP_038900086.1 putative ribosome biogenesis protein slx9-like [Benincasa hispida]2.08e-8993.67Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
        MGKPVSRSD KSKAERKFEKKVQFYERVGETI+TLNAQK ITKKK+HRRRKRDLKAFDLSTLSEFLPGLEA KQKPSAAELKLNCKSRLKFILKERKQMG
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG

Query:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        TVLNHPVFQADPLRA+QLHLEGTQPIEEPKKK  NKNGSKKRKEKKSKAS +PSSMEM
Subjt:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
TrEMBL top hitse value%identityAlignment
A0A0A0L113 Uncharacterized protein1.23e-9799.37Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
        MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQK+ITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG

Query:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
Subjt:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
A0A5A7V4K7 Putative ribosome biogenesis protein slx9-like2.67e-8694.77Show/hide
Query:  SRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNH
        ++SDVKSKAERKFEKKVQFYERVGE+I TLNAQK+ITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNH
Subjt:  SRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNH

Query:  PVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        PVFQADPLRAVQLHLEGTQPIEEPKKKK+NKNGSKKRKEKKSKA A+PSSMEM
Subjt:  PVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
A0A5D3BQL6 Putative ribosome biogenesis protein slx9-like3.95e-9496.2Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
        MGKPVSRSDVKSKAERKFEKKVQFYERVGE+I TLNAQK+ITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG

Query:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        TVLNHPVFQADPLRAVQLHLEGTQP EEPKKKKMNKNGSKKRKEKK KASA+PSSMEM
Subjt:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
A0A6J1E5M8 putative ribosome biogenesis protein slx9-like1.82e-7682.28Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
        MGKP SRSD KSKAERKFEKK+QFYERVGETI TLNAQK ITKKK  RRRKRDLKAFDL+ LSEFLPGL+A KQK S  ELK+NCKSRLKF+LKE KQMG
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG

Query:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        TVLNHP FQADPL A+ LHL+ TQP+EE KKKK N+NGSKKRKEKKSKA+AKPSSMEM
Subjt:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
A0A6J1JDX4 putative ribosome biogenesis protein slx9-like2.58e-7682.28Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG
        MGKP SRSD KSKAERKFEKK+QFYERVGETI TLNAQK ITKKK  RRRKRDLKAFDL+ LSEFLPGL+  KQK S  ELK+NCKSRLKF+LKE KQMG
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMG

Query:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
        TVLNHP FQADPL A+ LHLE TQP+EE KKKK N+NGSKKRKEKKSKA+AKPSSMEM
Subjt:  TVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01640.1 unknown protein1.2e-3251.63Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEA-TKQKPSAAELKLNCKSRLKFILKERKQM
        MGKP   S+V +K+++KFEKK+QFY +V +T+T+L+ QK I KKK  R R++ LKA+DL+ LSEFLP   A  K    A ELK+NCK R K +L E +++
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEA-TKQKPSAAELKLNCKSRLKFILKERKQM

Query:  GTVLNHPVFQADPLRAVQLHLEGTQ-PIEEPKKKKMNKNGSKKRKEKKSKASA
          VL+HP FQADP+ ++  HL   Q P+EE  KKK N NGSKKR +KK K  +
Subjt:  GTVLNHPVFQADPLRAVQLHLEGTQ-PIEEPKKKKMNKNGSKKRKEKKSKASA
AT2G01640.2 unknown protein1.2e-3251.63Show/hide
Query:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEA-TKQKPSAAELKLNCKSRLKFILKERKQM
        MGKP   S+V +K+++KFEKK+QFY +V +T+T+L+ QK I KKK  R R++ LKA+DL+ LSEFLP   A  K    A ELK+NCK R K +L E +++
Subjt:  MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEA-TKQKPSAAELKLNCKSRLKFILKERKQM

Query:  GTVLNHPVFQADPLRAVQLHLEGTQ-PIEEPKKKKMNKNGSKKRKEKKSKASA
          VL+HP FQADP+ ++  HL   Q P+EE  KKK N NGSKKR +KK K  +
Subjt:  GTVLNHPVFQADPLRAVQLHLEGTQ-PIEEPKKKKMNKNGSKKRKEKKSKASA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAACCAGTCTCCCGGTCGGATGTGAAATCTAAAGCTGAACGCAAATTTGAGAAGAAGGTCCAGTTTTATGAGAGAGTTGGAGAAACTATTACTACCTTGAATGC
TCAAAAGAATATTACTAAGAAGAAAAACCATCGAAGACGTAAAAGAGACTTGAAGGCTTTTGATCTTTCTACACTTTCAGAGTTTCTTCCTGGATTGGAGGCGACAAAAC
AAAAACCTTCTGCAGCCGAGTTAAAACTAAATTGCAAGTCTAGGCTAAAATTCATATTGAAGGAGAGAAAGCAAATGGGTACTGTTCTTAATCACCCTGTGTTTCAGGCA
GACCCATTGAGAGCTGTTCAGCTACATTTAGAGGGCACACAACCAATTGAGGAACCGAAGAAAAAGAAAATGAATAAAAATGGGAGCAAAAAAAGGAAAGAGAAGAAGTC
AAAAGCCTCGGCAAAACCTTCATCTATGGAGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAACCAGTCTCCCGGTCGGATGTGAAATCTAAAGCTGAACGCAAATTTGAGAAGAAGGTCCAGTTTTATGAGAGAGTTGGAGAAACTATTACTACCTTGAATGC
TCAAAAGAATATTACTAAGAAGAAAAACCATCGAAGACGTAAAAGAGACTTGAAGGCTTTTGATCTTTCTACACTTTCAGAGTTTCTTCCTGGATTGGAGGCGACAAAAC
AAAAACCTTCTGCAGCCGAGTTAAAACTAAATTGCAAGTCTAGGCTAAAATTCATATTGAAGGAGAGAAAGCAAATGGGTACTGTTCTTAATCACCCTGTGTTTCAGGCA
GACCCATTGAGAGCTGTTCAGCTACATTTAGAGGGCACACAACCAATTGAGGAACCGAAGAAAAAGAAAATGAATAAAAATGGGAGCAAAAAAAGGAAAGAGAAGAAGTC
AAAAGCCTCGGCAAAACCTTCATCTATGGAGATGTGA
Protein sequenceShow/hide protein sequence
MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKNITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQA
DPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM