; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7953 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7953
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description50S ribosomal protein L18
Genome locationctg1556:452019..454684
RNA-Seq ExpressionCucsat.G7953
SyntenyCucsat.G7953
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590442.1 hypothetical protein SDJN03_15865, partial [Cucurbita argyrosperma subsp. sororia]7.20e-6792.98Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPP++PPRLTQYLKPYVLKMHFTNK+VSAQVIHSETA VASAASSQEKAL+SSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQ+YHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AV+DSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

XP_004144339.1 uncharacterized protein LOC101221233 [Cucumis sativus]3.17e-70100Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AVIDSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

XP_008462699.1 PREDICTED: 50S ribosomal protein L18 [Cucumis melo]1.77e-6796.49Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPPIKPPRL QYLKPYVLKMHFTNKFVSAQVIHSETA VASAASSQEKAL+SSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQ+YHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AVIDSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

XP_022961444.1 uncharacterized protein LOC111462025 [Cucurbita moschata]1.02e-6692.98Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPP++PPRLTQYLKPYVLKMHFTNK+VSAQVIHSETA VASAASSQEKAL+SSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQ+YHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AV+DSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

XP_022968817.1 uncharacterized protein LOC111467940 [Cucurbita maxima]2.93e-6692.11Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPP++PPRLTQYLKPYVLKMHFTNK+VSAQVIHSETA VASAASSQEK L+SSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQ+YHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AV+DSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

TrEMBL top hitse value%identityAlignment
A0A0A0L0Z6 Uncharacterized protein1.54e-70100Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AVIDSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

A0A1S3CHJ0 50S ribosomal protein L188.55e-6896.49Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPPIKPPRL QYLKPYVLKMHFTNKFVSAQVIHSETA VASAASSQEKAL+SSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQ+YHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AVIDSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

A0A5D3DYC1 50S ribosomal protein L188.55e-6896.49Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPPIKPPRL QYLKPYVLKMHFTNKFVSAQVIHSETA VASAASSQEKAL+SSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQ+YHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AVIDSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

A0A6J1HE21 uncharacterized protein LOC1114620254.95e-6792.98Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPP++PPRLTQYLKPYVLKMHFTNK+VSAQVIHSETA VASAASSQEKAL+SSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQ+YHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AV+DSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

A0A6J1I0R8 uncharacterized protein LOC1114679401.42e-6692.11Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPPP++PPRLTQYLKPYVLKMHFTNK+VSAQVIHSETA VASAASSQEK L+SSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQ+YHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AV+DSVREAGIKLL
Subjt:  AVIDSVREAGIKLL

SwissProt top hitse value%identityAlignment
A7HM36 50S ribosomal protein L181.7e-0942.53Show/hide
Query:  TNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK
        + K + AQ+I     I   AAS+ EKA++  ++ T ++ AA ++GKL+ ER L KGI  V V  +   +YHG+VKA+ D+ REAG+K
Subjt:  TNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK

A8IAP8 50S ribosomal protein L182.3e-0943.48Show/hide
Query:  LKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK
        L +H T+K + AQ+I         AASS EK L+SS+++  DV AA  IGKL+ ER   KG+ AV V  +    YHG+VKA+ +  RE G++
Subjt:  LKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK

B6EPU1 50S ribosomal protein L186.6e-0944.57Show/hide
Query:  LKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK
        L +H T +   AQVI    + V +AAS+ EKA++  + +T + AAA  IGKL+ ER + KGI  V       Q YHG+V A+ DS REAG+K
Subjt:  LKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK

P52863 50S ribosomal protein L182.9e-0943.48Show/hide
Query:  LKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK
        L +H T + V AQVI S  + V +AAS+ EKA++  +++T +V AA  +GK + ER L KG+  V       Q YHG+V A+ +S REAG+K
Subjt:  LKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK

Q89A81 50S ribosomal protein L182.9e-0941.3Show/hide
Query:  LKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK
        L +H T+K + AQ+I S+ A+V ++AS+ EK + + ++ T ++ A+  IGK + ER L+KGI  V       Q YHG+VKA+ D+ RE+G+K
Subjt:  LKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK

Arabidopsis top hitse value%identityAlignment
AT3G20230.1 Ribosomal L18p/L5e family protein1.6e-1033.66Show/hide
Query:  RLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAG
        R   Y++P++L + F+ KF+ A+V+H  T+ V S A++  + +++++ S  D  A   IGKL+ ER +   + AV    ++ +R  GK+  VID+++E G
Subjt:  RLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAG

Query:  I
        I
Subjt:  I

AT3G22450.1 Ribosomal L18p/L5e family protein1.0e-0429.17Show/hide
Query:  PYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIKL
        P+ L ++ + + V A VIH  T+ V + A S  K ++  + S R+VAA A +G +L +R L   I  V    ++  +  GK++ V+ ++ + G+ +
Subjt:  PYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIKL

AT3G45020.1 Ribosomal L18p/L5e family protein5.9e-0530.63Show/hide
Query:  LKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTR--DVAAAAKIGKLLGERLLLKGIP-----AVCVHLKREQRYHG-----KVKAVI
        LK YVL++  + K+++A V+      + + AS+ E  +++S+E  R  +  AAA +G++L  RL ++G+       +   +K+E    G     KV AVI
Subjt:  LKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTR--DVAAAAKIGKLLGERLLLKGIP-----AVCVHLKREQRYHG-----KVKAVI

Query:  DSVREAGIKLL
        +S+R  G+ L+
Subjt:  DSVREAGIKLL

AT5G27820.1 Ribosomal L18p/L5e family protein2.5e-4378.07Show/hide
Query:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK
        MVIPP ++PPRL  YLKPYVLKMHFTNKFV AQVIHS TA VA +ASSQEKAL+ +M+ TRDVAAA+KIGK+LGERLL+K IPAV + +K+EQRYHGKVK
Subjt:  MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK

Query:  AVIDSVREAGIKLL
        AVIDSVREAG+KLL
Subjt:  AVIDSVREAGIKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATTCCTCCTCCAATCAAGCCACCAAGATTAACCCAGTATCTAAAGCCATATGTCTTGAAGATGCACTTCACAAACAAGTTTGTGAGTGCCCAGGTGATCCACTC
TGAAACAGCCATTGTTGCTTCAGCTGCAAGCTCACAAGAGAAGGCATTGCAGTCGAGCATGGAGTCGACAAGGGATGTTGCTGCTGCTGCAAAGATTGGAAAATTGTTGG
GAGAGAGGCTTTTGCTTAAGGGAATCCCAGCTGTTTGTGTGCACTTGAAAAGGGAACAGAGATATCATGGTAAGGTCAAAGCTGTTATTGATTCTGTGAGGGAAGCAGGT
ATTAAGCTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATTCCTCCTCCAATCAAGCCACCAAGATTAACCCAGTATCTAAAGCCATATGTCTTGAAGATGCACTTCACAAACAAGTTTGTGAGTGCCCAGGTGATCCACTC
TGAAACAGCCATTGTTGCTTCAGCTGCAAGCTCACAAGAGAAGGCATTGCAGTCGAGCATGGAGTCGACAAGGGATGTTGCTGCTGCTGCAAAGATTGGAAAATTGTTGG
GAGAGAGGCTTTTGCTTAAGGGAATCCCAGCTGTTTGTGTGCACTTGAAAAGGGAACAGAGATATCATGGTAAGGTCAAAGCTGTTATTGATTCTGTGAGGGAAGCAGGT
ATTAAGCTGCTTTGA
Protein sequenceShow/hide protein sequence
MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAG
IKLL