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Cucsat.G7964 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7964
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibonuclease
Genome locationctg1556:1103874..1106312
RNA-Seq ExpressionCucsat.G7964
SyntenyCucsat.G7964
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0016442 - RISC complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649665.1 hypothetical protein Csa_012973 [Cucumis sativus]1.09e-2494.12Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
        +VIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKG +
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
KAG8388177.1 hypothetical protein BUALT_Bualt02G0098700 [Buddleja alternifolia]1.73e-1342.31Show/hide
Query:  GRTMLKGRKCPIVQ--LLKANRKKCSRFATWMW-IFLSNFYFLLFANLFYCHTQVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPK
        GR M + RK  +VQ  +L+ +RK+  R+    + +F  +F+ L+  N  Y  +QVIVT+V+ G KFYVQ++ DQ   ++Q+QL +L+LQE P+I  F+PK
Subjt:  GRTMLKGRKCPIVQ--LLKANRKKCSRFATWMW-IFLSNFYFLLFANLFYCHTQVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPK

Query:  KGRL
        KG +
Subjt:  KGRL
XP_004138013.1 ribonuclease TUDOR 1 [Cucumis sativus]1.73e-1376.47Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
        +VIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  F+PKKG +
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
XP_008464356.1 PREDICTED: staphylococcal nuclease domain-containing protein 1 [Cucumis melo]6.80e-1478.43Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
        +VIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKG +
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
XP_038878676.1 ribonuclease TUDOR 1-like [Benincasa hispida]6.80e-1478.43Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
        +VIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKG +
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
TrEMBL top hitse value%identityAlignment
A0A0A0L3G7 Uncharacterized protein2.82e-6898.08Show/hide
Query:  MLKGRTMLKGRKCPIVQLLKANRKKCSRFATWMWIFLSNFYFLLFANLFYCHTQVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPK
        MLKGRTMLKGRKCPIVQLLKANRKKCSRFATWMWIFLSNFYFLLFANLFYCHTQVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPK
Subjt:  MLKGRTMLKGRKCPIVQLLKANRKKCSRFATWMWIFLSNFYFLLFANLFYCHTQVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPK

Query:  KGRL
        KG +
Subjt:  KGRL
A0A0A0LRJ8 Ribonuclease8.35e-1476.47Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
        +VIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  F+PKKG +
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
A0A1S3CL97 Ribonuclease3.29e-1478.43Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
        +VIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKG +
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
A0A5D3BH85 Ribonuclease3.29e-1478.43Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
        +VIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKG +
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
E5GBL0 Ribonuclease3.29e-1478.43Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
        +VIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKG +
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRL
SwissProt top hitse value%identityAlignment
Q8VZG7 Ribonuclease TUDOR 13.0e-0741.18Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
        +V+VTEVL G +FYVQ+  DQ   S+Q QL +L++++ P+I  F+PK+G +    +  +LD S+ +A+
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
Q9FLT0 Ribonuclease TUDOR 29.2e-0945.59Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
        +V+VTEVL G +FYVQT+ DQ   S+Q QL  L+L++ P+I  F+PKKG +    +  +LD S+ +A+
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
Arabidopsis top hitse value%identityAlignment
AT5G07350.1 TUDOR-SN protein 12.1e-0841.18Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
        +V+VTEVL G +FYVQ+  DQ   S+Q QL +L++++ P+I  F+PK+G +    +  +LD S+ +A+
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
AT5G07350.2 TUDOR-SN protein 12.1e-0841.18Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
        +V+VTEVL G +FYVQ+  DQ   S+Q QL +L++++ P+I  F+PK+G +    +  +LD S+ +A+
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
AT5G61780.1 TUDOR-SN protein 26.5e-1045.59Show/hide
Query:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI
        +V+VTEVL G +FYVQT+ DQ   S+Q QL  L+L++ P+I  F+PKKG +    +  +LD S+ +A+
Subjt:  QVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYWSALDFSFYKAI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGGGGAGAACTATGTTGAAGGGGAGGAAGTGTCCAATCGTGCAACTGTTGAAAGCAAACAGAAAGAAGTGCTCAAGGTTTGCAACTTGGATGTGGATATTTCT
GAGTAACTTTTACTTCTTGTTGTTTGCGAACCTTTTCTATTGTCACACTCAGGTAATTGTCACCGAGGTTTTGGATGGTGACAAGTTTTATGTTCAGACAATTCCGGACC
AAACAGCCACTTCTCTACAGCAGCAACTAGAGACTTTGAATCTTCAAGAAGTCCCTTTAATCTGTGGTTTTAGTCCTAAAAAAGGTAGGCTATGCTACTATGGCTATTGG
AGCGCCTTGGATTTTTCATTCTATAAAGCAATTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGGGGAGAACTATGTTGAAGGGGAGGAAGTGTCCAATCGTGCAACTGTTGAAAGCAAACAGAAAGAAGTGCTCAAGGTTTGCAACTTGGATGTGGATATTTCT
GAGTAACTTTTACTTCTTGTTGTTTGCGAACCTTTTCTATTGTCACACTCAGGTAATTGTCACCGAGGTTTTGGATGGTGACAAGTTTTATGTTCAGACAATTCCGGACC
AAACAGCCACTTCTCTACAGCAGCAACTAGAGACTTTGAATCTTCAAGAAGTCCCTTTAATCTGTGGTTTTAGTCCTAAAAAAGGTAGGCTATGCTACTATGGCTATTGG
AGCGCCTTGGATTTTTCATTCTATAAAGCAATTGGTTGA
Protein sequenceShow/hide protein sequence
MLKGRTMLKGRKCPIVQLLKANRKKCSRFATWMWIFLSNFYFLLFANLFYCHTQVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGRLCYYGYW
SALDFSFYKAIG