; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G7997 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G7997
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionProtein terminal ear1-like protein
Genome locationctg1556:2042177..2043495
RNA-Seq ExpressionCucsat.G7997
SyntenyCucsat.G7997
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR007201 - Mei2-like, C-terminal RNA recognition motif
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052403.1 protein terminal ear1-like protein [Cucumis melo var. makuwa]2.19e-8685.71Show/hide
Query:  PRSDGFCGGGGGSISYSQPQRCEGDRKMKWVPTKLHFDVAD-DNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKK-HSLDSCR
        PRSDGFCGGGG  +SYSQPQR + DR+MK VPTKLHFDVAD +NNNSDQVLP +TQTTTLMIKNIPNQFRQNHLLNILDKHCKWKN  YEKK +SLDS R
Subjt:  PRSDGFCGGGGGSISYSQPQRCEGDRKMKWVPTKLHFDVAD-DNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKK-HSLDSCR

Query:  RSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
        RSEYDFVYLPMDFRKYWYDG+ISNLGYAFVNFTNPTAASEF EAFH R+WDV V
Subjt:  RSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV

KAG7031696.1 Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.05e-3751.28Show/hide
Query:  FCGGGGG-SISYSQPQRCEGDRKM--------KWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS
        F GGGGG S+S+ +     GD K         KWVP+            +  ++P   +TTT+MIKNIPNQ R+++LL ILD+HCK KN SY  ++S   
Subjt:  FCGGGGG-SISYSQPQRCEGDRKM--------KWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS

Query:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
          RSEYDFVYLPMDF K+W+DG++SNLGYAFVNFT+   ASEF +A+HRR+W+V+V
Subjt:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV

XP_022940738.1 protein MEI2-like 6 [Cucurbita moschata]1.05e-3751.28Show/hide
Query:  FCGGGGG-SISYSQPQRCEGDRKM--------KWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS
        F GGGGG S+S+ +     GD K         KWVP+            +  ++P   +TTT+MIKNIPNQ R+++LL ILD+HCK KN SY  ++S   
Subjt:  FCGGGGG-SISYSQPQRCEGDRKM--------KWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS

Query:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
          RSEYDFVYLPMDF K+W+DG++SNLGYAFVNFT+   ASEF +A+HRR+W+V+V
Subjt:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV

XP_031740583.1 protein terminal ear1 homolog [Cucumis sativus]9.81e-11198.72Show/hide
Query:  CSPRSDGFCGGGGG--SISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS
        CSPRSDGFCGGGGG  SISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS
Subjt:  CSPRSDGFCGGGGG--SISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS

Query:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
        CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
Subjt:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV

XP_038896615.1 protein terminal ear1 homolog [Benincasa hispida]1.96e-5563.86Show/hide
Query:  PRSDGFCGGGGGSISYSQPQ-----RCEGDRKM-----KWVPTKLHFDVA--DDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASY
        P SDGFCGGGGG +S+SQ +       +G+RK      +WVP +LHF V    DN+ + Q+LPF  QTTTLMIKNIPNQ R+N L+NILD+HCK KNAS+
Subjt:  PRSDGFCGGGGGSISYSQPQ-----RCEGDRKM-----KWVPTKLHFDVA--DDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASY

Query:  EKKHS--LDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
        EK +   LD  RRSEYDFVYLPMDFRK      ISNLGYAFVNFTNPTAASEF +AFHRR+W+VAV
Subjt:  EKKHS--LDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV

TrEMBL top hitse value%identityAlignment
A0A0A0KYM0 Uncharacterized protein4.75e-11198.72Show/hide
Query:  CSPRSDGFCGGGGG--SISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS
        CSPRSDGFCGGGGG  SISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS
Subjt:  CSPRSDGFCGGGGG--SISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS

Query:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
        CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
Subjt:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV

A0A5A7U920 Protein terminal ear1-like protein1.06e-8685.71Show/hide
Query:  PRSDGFCGGGGGSISYSQPQRCEGDRKMKWVPTKLHFDVAD-DNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKK-HSLDSCR
        PRSDGFCGGGG  +SYSQPQR + DR+MK VPTKLHFDVAD +NNNSDQVLP +TQTTTLMIKNIPNQFRQNHLLNILDKHCKWKN  YEKK +SLDS R
Subjt:  PRSDGFCGGGGGSISYSQPQRCEGDRKMKWVPTKLHFDVAD-DNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKK-HSLDSCR

Query:  RSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
        RSEYDFVYLPMDFRKYWYDG+ISNLGYAFVNFTNPTAASEF EAFH R+WDV V
Subjt:  RSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV

A0A5D3DSN8 Protein MEI2-like 76.18e-2847.66Show/hide
Query:  KWVPTKLHFDVA----DDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLG
        +WV  K+  D      D  +  ++ LPF +  TT+MIKNIPNQF++  LL +LD +C   N   + +   D C  +EYDFVYLPMDF + WY+G++SNLG
Subjt:  KWVPTKLHFDVA----DDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLG

Query:  YAFVNFTNPTAASEFREAFHRRRWDVAV
        YAFVNFT  +AAS+F   +H  +WDV V
Subjt:  YAFVNFTNPTAASEFREAFHRRRWDVAV

A0A6J1FEC5 meiosis protein mei2-like5.34e-2948.06Show/hide
Query:  KWVPTKLHFDVADDNNNSDQVLPFRTQT-----TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNL
        +WV  K+    +D++NN+D   P          TTLMIKNIPNQF++  LL +LD++C+  N   +++ S      SEYDFVYLPMDF + WY+G++SNL
Subjt:  KWVPTKLHFDVADDNNNSDQVLPFRTQT-----TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNL

Query:  GYAFVNFTNPTAASEFREAFHRRRWDVAV
        GYAFVNFT   AAS+F   +H  +WDV V
Subjt:  GYAFVNFTNPTAASEFREAFHRRRWDVAV

A0A6J1FQ49 protein MEI2-like 65.07e-3851.28Show/hide
Query:  FCGGGGG-SISYSQPQRCEGDRKM--------KWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS
        F GGGGG S+S+ +     GD K         KWVP+            +  ++P   +TTT+MIKNIPNQ R+++LL ILD+HCK KN SY  ++S   
Subjt:  FCGGGGG-SISYSQPQRCEGDRKM--------KWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDS

Query:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV
          RSEYDFVYLPMDF K+W+DG++SNLGYAFVNFT+   ASEF +A+HRR+W+V+V
Subjt:  CRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV

SwissProt top hitse value%identityAlignment
A2WY46 Protein terminal ear1 homolog1.7e-1544.68Show/hide
Query:  TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDV
        TT+MI+NIPN++ Q  LLN+LD HC   N   E     ++   S YDF+YLP+DF          N+GY FVN T+P AA    +AFH++ W+V
Subjt:  TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDV

O65001 Protein terminal ear15.4e-1444.9Show/hide
Query:  TTLMIKNIPNQFRQNHLLNILDKHC----KWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDV
        TT+MI+NIPN++ Q  LLN+LD HC    +W  AS E++        S YDFVYLP+DF          N+GY FVN T+P A     +AFH++ W+V
Subjt:  TTLMIKNIPNQFRQNHLLNILDKHC----KWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDV

Q0JGS5 Protein terminal ear1 homolog5.7e-1635.86Show/hide
Query:  GGGGGSISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLP--FRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFV
        GGGGG     + Q+   + +  +   +     A D   S+   P   +   TT+MI+NIPN++ Q  LLN+LD HC   N   E     ++   S YDF+
Subjt:  GGGGGSISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLP--FRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFV

Query:  YLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDV
        YLP+DF          N+GY FVN T+P AA    +AFH++ W+V
Subjt:  YLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDV

Q652K6 Protein MEI2-like 61.8e-1442.86Show/hide
Query:  LPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLD--SCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRR
        L F   TT+LMI+NIPN+F +  L+ ILD+HC  +N    ++      S  +SEYDF Y+P+DF+  +      N GYAFVN T  TAA   R      R
Subjt:  LPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLD--SCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRR

Query:  WDVAV
        WD A+
Subjt:  WDVAV

Q8W4I9 Protein MEI2-like 11.9e-1135.92Show/hide
Query:  DQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRR
        D++L    + TTLMIKNIPN++    LL+ +D+HCK                   YDF+YLP+DF+         N+GYAF+N   P     F +AF+ +
Subjt:  DQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRR

Query:  RWD
        +W+
Subjt:  RWD

Arabidopsis top hitse value%identityAlignment
AT1G37140.1 MEI2 C-terminal RRM only like 12.2e-1547.31Show/hide
Query:  TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWD
        T++M+KNIPN   +  LL ILD HC        +KH+     +S YDF+YLPMDF      G+ +NLGYAFVNFT+  AA  FR  F    WD
Subjt:  TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWD

AT1G67770.1 terminal EAR1-like 21.4e-1740Show/hide
Query:  ISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRK
        + Y Q Q+    +K K+V   L       N N+     FR   TT+MIKNIPN++ Q  LL +LD HCK  N S  K+   +    S YDFVYLP+DF  
Subjt:  ISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRK

Query:  YWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRW
               SN+GY FVN T+P A     ++FH + W
Subjt:  YWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRW

AT3G26120.1 terminal EAR1-like 15.7e-1948.51Show/hide
Query:  RTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRR---SEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWD
        R   TTLMIKNIPN++ Q  LL++LDKHC   N +  ++H+         S YDFVYLPMDF          N+GY FVN T+P AA  F +AFH +RW+
Subjt:  RTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRR---SEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWD

Query:  V
        V
Subjt:  V

AT5G07930.1 MEI2 C-terminal RRM only like 22.5e-1441.3Show/hide
Query:  TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRW
        TT+M++NIPN++ +  ++  +DKHC+  N S +     +    S YDF+YLP+DFR         N GYAFVNFTN  A S+F+ A + + W
Subjt:  TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRW

AT5G07930.2 MEI2 C-terminal RRM only like 22.5e-1441.3Show/hide
Query:  TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRW
        TT+M++NIPN++ +  ++  +DKHC+  N S +     +    S YDF+YLP+DFR         N GYAFVNFTN  A S+F+ A + + W
Subjt:  TTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTCGCCCCGTTCCGATGGTTTTTGCGGCGGCGGCGGCGGCTCTATTTCTTATTCTCAGCCACAACGCTGTGAGGGTGACAGAAAGATGAAATGGGTTCCGACCAAACT
TCATTTTGACGTTGCTGATGATAATAATAATAGCGATCAAGTCTTGCCTTTTCGAACTCAAACTACCACTCTCATGATCAAGAATATTCCCAATCAATTTAGGCAAAATC
ATTTATTGAATATTCTGGACAAGCATTGCAAGTGGAAGAACGCAAGTTATGAAAAGAAGCATAGTTTGGACAGCTGCCGTCGGTCGGAATACGACTTTGTTTACTTGCCA
ATGGACTTCCGGAAATATTGGTACGATGGGCAAATATCAAATCTTGGATATGCTTTTGTAAATTTCACAAACCCTACAGCAGCTTCCGAGTTTCGTGAAGCCTTTCATCG
CCGACGATGGGATGTTGCAGTC
mRNA sequenceShow/hide mRNA sequence
TGTTCGCCCCGTTCCGATGGTTTTTGCGGCGGCGGCGGCGGCTCTATTTCTTATTCTCAGCCACAACGCTGTGAGGGTGACAGAAAGATGAAATGGGTTCCGACCAAACT
TCATTTTGACGTTGCTGATGATAATAATAATAGCGATCAAGTCTTGCCTTTTCGAACTCAAACTACCACTCTCATGATCAAGAATATTCCCAATCAATTTAGGCAAAATC
ATTTATTGAATATTCTGGACAAGCATTGCAAGTGGAAGAACGCAAGTTATGAAAAGAAGCATAGTTTGGACAGCTGCCGTCGGTCGGAATACGACTTTGTTTACTTGCCA
ATGGACTTCCGGAAATATTGGTACGATGGGCAAATATCAAATCTTGGATATGCTTTTGTAAATTTCACAAACCCTACAGCAGCTTCCGAGTTTCGTGAAGCCTTTCATCG
CCGACGATGGGATGTTGCAGTC
Protein sequenceShow/hide protein sequence
CSPRSDGFCGGGGGSISYSQPQRCEGDRKMKWVPTKLHFDVADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRRSEYDFVYLP
MDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAV