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Cucsat.G8004 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8004
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description3-isopropylmalate dehydratase large subunit, chloroplastic isoform B
Genome locationctg1556:2244172..2246541
RNA-Seq ExpressionCucsat.G8004
SyntenyCucsat.G8004
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151748.1 uncharacterized protein LOC101219754 [Cucumis sativus]1.94e-6094.39Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPSE
        MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS 
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPSE

Query:  LLARTQE
         +  T E
Subjt:  LLARTQE
XP_008444149.1 PREDICTED: uncharacterized protein LOC103487583 [Cucumis melo]4.69e-5288.89Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
        MD ASKFLR L+N  NKNT+INVCLV SFAAL+ARSIKQERQIEALE EKNSLL+SNKALKKTMWDWKQQLFAEAST+SALVPLARIKAIYGEAPISPS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
XP_022937146.1 uncharacterized protein LOC111443531 [Cucurbita moschata]1.05e-4878.79Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
        MD A+KFLR++ +ATN NT+INVCLV+SF AL+ARSIKQ+R+IEALE EK+SLLNSNK+LKKTMWDWKQQL+++AST+SALVPLARIKAIYGEAP+SPS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
XP_022976887.1 uncharacterized protein LOC111477117 [Cucurbita maxima]3.16e-5081.82Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
        MD ASKFLR+L NATN NT+INVCLV+SF AL+ARSIKQ+R+IEALE EK+SLLNSNKALKKTMWDWKQQL++EAST+SAL+PLARIKAIY EAP+SPS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
XP_038897052.1 uncharacterized protein LOC120085226 [Benincasa hispida]5.46e-5185.86Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
        MD ASKFLR++ NATN NT+INVCLV+SF AL+ARSIKQ+R+IEALE EK SLLNSNKALKKTMWDWKQQLFAEAST+SALVPLARIKAIYGEAPISPS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
TrEMBL top hitse value%identityAlignment
A0A0A0L380 Uncharacterized protein4.65e-60100Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
        MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
A0A1S3B9R7 uncharacterized protein LOC1034875832.27e-5288.89Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
        MD ASKFLR L+N  NKNT+INVCLV SFAAL+ARSIKQERQIEALE EKNSLL+SNKALKKTMWDWKQQLFAEAST+SALVPLARIKAIYGEAPISPS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
A0A6J1CGB8 uncharacterized protein LOC1110112726.12e-4882.47Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPIS
        MD A+KFLR+L NA+N  T+INVCLVVSF AL+ARSIKQ+R+IEALE EK+SLLNSNKALKK+MWDWKQQLFAEAS+ESALVPLARIKAIYGE PIS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPIS
A0A6J1F9J6 uncharacterized protein LOC1114435315.10e-4978.79Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
        MD A+KFLR++ +ATN NT+INVCLV+SF AL+ARSIKQ+R+IEALE EK+SLLNSNK+LKKTMWDWKQQL+++AST+SALVPLARIKAIYGEAP+SPS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
A0A6J1IGY3 uncharacterized protein LOC1114771171.53e-5081.82Show/hide
Query:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
        MD ASKFLR+L NATN NT+INVCLV+SF AL+ARSIKQ+R+IEALE EK+SLLNSNKALKKTMWDWKQQL++EAST+SAL+PLARIKAIY EAP+SPS
Subjt:  MDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48200.1 unknown protein8.1e-2149.54Show/hide
Query:  ASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEAST--ESALVPLARIKAIYGEAPISPSEL
        A+K    L+ A N N VIN CL VSF  L  RS KQ++ +EAL  +K SL  SNKA+K TMW+WKQQLFAEA++   +A+VPL+ +KAIYGE   + ++ 
Subjt:  ASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEAST--ESALVPLARIKAIYGEAPISPSEL

Query:  LARTQETNK
            +E +K
Subjt:  LARTQETNK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAAGGTTCCCGGAGCTTCATTGCAGAATGGATTCGGCCTCCAAATTCCTTCGTAGTTTAGCTAATGCCACCAACAAAAACACCGTTATCAACGTCTGTTTAGTCGTTTC
CTTCGCCGCACTGACCGCAAGGTCAATCAAGCAGGAGAGACAAATTGAAGCTCTGGAAACCGAGAAAAATTCACTTCTCAATTCCAATAAAGCGTTGAAGAAAACCATGT
GGGATTGGAAGCAACAGCTATTCGCCGAAGCCTCAACCGAATCTGCTTTAGTCCCTCTTGCCAGGATCAAAGCTATCTATGGCGAAGCTCCCATTTCCCCTTCCGAACTA
TTAGCCAGAACCCAGGAAACAAATAAGGAGCAGTAA
mRNA sequenceShow/hide mRNA sequence
TCAAGGTTCCCGGAGCTTCATTGCAGAATGGATTCGGCCTCCAAATTCCTTCGTAGTTTAGCTAATGCCACCAACAAAAACACCGTTATCAACGTCTGTTTAGTCGTTTC
CTTCGCCGCACTGACCGCAAGGTCAATCAAGCAGGAGAGACAAATTGAAGCTCTGGAAACCGAGAAAAATTCACTTCTCAATTCCAATAAAGCGTTGAAGAAAACCATGT
GGGATTGGAAGCAACAGCTATTCGCCGAAGCCTCAACCGAATCTGCTTTAGTCCCTCTTGCCAGGATCAAAGCTATCTATGGCGAAGCTCCCATTTCCCCTTCCGAACTA
TTAGCCAGAACCCAGGAAACAAATAAGGAGCAGTAA
Protein sequenceShow/hide protein sequence
SRFPELHCRMDSASKFLRSLANATNKNTVINVCLVVSFAALTARSIKQERQIEALETEKNSLLNSNKALKKTMWDWKQQLFAEASTESALVPLARIKAIYGEAPISPSEL
LARTQETNKEQ