; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G8006 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8006
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionplastid transcriptionally active 6
Genome locationctg1556:2254790..2256826
RNA-Seq ExpressionCucsat.G8006
SyntenyCucsat.G8006
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]8.87e-20896.66Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPTINRLR SSIS+A SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.21e-19793.33Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSPLPP TI+RLR  SIS+A+SL HLPSLPY K+TP ASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAA-GSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAA GS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAA-GSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]2.36e-20896.66Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPTINRLR SSIS+A SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]1.40e-216100Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]3.06e-20495.32Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+SSPL P TINRLR SSIS+A+SLPHLPSLPY K+TP  SPLF PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876131.14e-20896.66Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPTINRLR SSIS+A SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

A0A5A7UA32 Uncharacterized protein4.29e-20896.66Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPTINRLR SSIS+A SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

A0A5J5BWI0 Uncharacterized protein8.68e-15373.91Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        M +T+ L   PL PP     ++  +++  SL   P+L +    P  + +F PR + FRV++DDGD D GGPDDYDMD+EE+EEVDNKKD+D+EYDPLAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AA+A G  G GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPD+DVYDFREMYVTPPDTD+YAIP+VLAP+PQKYIRCA+
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        SDYGCYNVTEPPID+PRDPLYKSE E+ KVFLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR+RDR+ DLLV+RDNGNSFKIIHS
Subjt:  SDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

A0A6J1F6A7 uncharacterized protein LOC1114425721.12e-19592.38Show/hide
Query:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSPLPP TI+RLR  SIS+A+SL HLPSL Y K+TP ASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAA
Subjt:  MNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAA---GSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAA   GS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAA---GSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HS
        HS
Subjt:  HS

A0A6J1IGR4 uncharacterized protein LOC1114770761.48e-19692.43Show/hide
Query:  MNSTVFLLSSPLP--PPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLA
        MNSTVFLLSSPLP  P TI+RLR  SIS+A+SLPHLPSLPY K+TP ASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LA
Subjt:  MNSTVFLLSSPLP--PPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLA

Query:  AAAAAAA---GSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
        AAAAAAA   GS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  AAAAAAA---GSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK

Query:  IIHS
        IIHS
Subjt:  IIHS

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic4.4e-11272.7Show/hide
Query:  SISSAASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ S  S P  PS        ++T    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISSAASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPD+DVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPID+P
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 63.1e-11372.7Show/hide
Query:  SISSAASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ S  S P  PS        ++T    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISSAASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPD+DVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPID+P
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH

AT1G21600.2 plastid transcriptionally active 63.1e-11372.7Show/hide
Query:  SISSAASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ S  S P  PS        ++T    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISSAASLPHLPS-----LPYWKTTPCASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPD+DVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPID+P
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACACACAGTATGCATCAACAAAATATAATAGGGTTCGAATTCTCCGGCGCCCGCTTCACAGAGGTTGCGTCCTCATGAACTCCACCGTCTTCCTCCTCTCCTCGCCGTT
GCCGCCCCCCACAATCAACCGTCTCCGAGTCTCCTCCATCTCTTCCGCAGCCTCTCTTCCCCACCTCCCAAGCCTGCCCTACTGGAAAACCACTCCCTGTGCATCTCCTC
TCTTCCTCCCTAGAAGAAACCCTTTTCGAGTCTTCTCCGACGATGGCGACGGTGATAGCGGTGGTCCCGATGACTACGACATGGACGACGAGGAAATGGAGGAAGTCGAC
AACAAGAAAGATTTCGACATCGAGTACGATCCTCTAGCCGCCGCGGCAGCTGCAGCAGCGGGTTCCGACGGCGTCGGCGATGAGAATATCTCGATTGTGCAGAGCAAAAG
CTTCGTGTCCACACAGGGATGGGATTCGGAGATGATTGTGGATTATAGGATAAACGAGGAGGAATTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGC
CGCCGGATCCCGACAGTGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCGGACACTGATGTTTATGCCATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTAT
ATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCTATTGATTCACCTAGAGATCCATTATACAAGTCAGAAAAGGAGGTTCTTAAGGTTTTCTT
GACGAAGCACTTCAGAAACCGAAGGCTGCGGGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACCAAGTCAATCACCAGGGCAAAAGTCC
TGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGAGACAATGGGAACTCTTTCAAGATCATCCATTCGGTATCCGTTTCTTATCTA
CCAGATTTCATTAGCATTTTATGCTCTGTTTATTGCTTAATCCCCTATACTCTCAATGCAATCTAG
mRNA sequenceShow/hide mRNA sequence
CACACACAGTATGCATCAACAAAATATAATAGGGTTCGAATTCTCCGGCGCCCGCTTCACAGAGGTTGCGTCCTCATGAACTCCACCGTCTTCCTCCTCTCCTCGCCGTT
GCCGCCCCCCACAATCAACCGTCTCCGAGTCTCCTCCATCTCTTCCGCAGCCTCTCTTCCCCACCTCCCAAGCCTGCCCTACTGGAAAACCACTCCCTGTGCATCTCCTC
TCTTCCTCCCTAGAAGAAACCCTTTTCGAGTCTTCTCCGACGATGGCGACGGTGATAGCGGTGGTCCCGATGACTACGACATGGACGACGAGGAAATGGAGGAAGTCGAC
AACAAGAAAGATTTCGACATCGAGTACGATCCTCTAGCCGCCGCGGCAGCTGCAGCAGCGGGTTCCGACGGCGTCGGCGATGAGAATATCTCGATTGTGCAGAGCAAAAG
CTTCGTGTCCACACAGGGATGGGATTCGGAGATGATTGTGGATTATAGGATAAACGAGGAGGAATTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGC
CGCCGGATCCCGACAGTGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCGGACACTGATGTTTATGCCATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTAT
ATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCTATTGATTCACCTAGAGATCCATTATACAAGTCAGAAAAGGAGGTTCTTAAGGTTTTCTT
GACGAAGCACTTCAGAAACCGAAGGCTGCGGGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACCAAGTCAATCACCAGGGCAAAAGTCC
TGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGAGACAATGGGAACTCTTTCAAGATCATCCATTCGGTATCCGTTTCTTATCTA
CCAGATTTCATTAGCATTTTATGCTCTGTTTATTGCTTAATCCCCTATACTCTCAATGCAATCTAG
Protein sequenceShow/hide protein sequence
HTQYASTKYNRVRILRRPLHRGCVLMNSTVFLLSSPLPPPTINRLRVSSISSAASLPHLPSLPYWKTTPCASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVD
NKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
IRCAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSVSVSYL
PDFISILCSVYCLIPYTLNAI