; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G8106 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8106
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Genome locationctg1557:357927..364710
RNA-Seq ExpressionCucsat.G8106
SyntenyCucsat.G8106
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653270.1 hypothetical protein Csa_023162 [Cucumis sativus]2.28e-179100Show/hide
Query:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
        MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
Subjt:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV

Query:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

TYJ97367.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]6.94e-16895.95Show/hide
Query:  SKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDM
        SKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHVSRLLKLDM
Subjt:  SKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDM

Query:  VAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDP
        +AVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSP+P
Subjt:  VAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDP

Query:  PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
        PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
Subjt:  PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR

XP_004145279.2 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucumis sativus]1.27e-179100Show/hide
Query:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
        MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
Subjt:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV

Query:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDP

XP_008457435.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo]2.88e-17896.08Show/hide
Query:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
        MAIRWFSRSKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHV
Subjt:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV

Query:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDM+AVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR

XP_038895593.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida]7.91e-17693.73Show/hide
Query:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
        MAIRWFSRSKLP+FASVFL+GLTRRPIRD  LPVKSTIT FQPDS RP+WGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK EKFMKSHV
Subjt:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV

Query:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
         RLLKLDM++VLGELERQEEVALAVKIFRLI+KQDWYKPDV+IYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHV+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR

TrEMBL top hitse value%identityAlignment
A0A0A0LVE9 Uncharacterized protein3.32e-186100Show/hide
Query:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
        MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
Subjt:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV

Query:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR

A0A1S3C5H5 pentatricopeptide repeat-containing protein At3g468701.39e-17896.08Show/hide
Query:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
        MAIRWFSRSKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHV
Subjt:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV

Query:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDM+AVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR

A0A5A7SRJ7 Pentatricopeptide repeat-containing protein1.39e-17896.08Show/hide
Query:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
        MAIRWFSRSKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHV
Subjt:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV

Query:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDM+AVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
Subjt:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR

A0A5D3BE11 Pentatricopeptide repeat-containing protein3.36e-16895.95Show/hide
Query:  SKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDM
        SKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHVSRLLKLDM
Subjt:  SKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDM

Query:  VAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDP
        +AVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSP+P
Subjt:  VAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDP

Query:  PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
        PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
Subjt:  PDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR

A0A6J1E045 pentatricopeptide repeat-containing protein At3g468706.53e-16890.2Show/hide
Query:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV
        MAIR FSRSKLP+FASVFL+GLTRRPIRD+PLPVKS IT FQPDS RPI GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK +KFMKSHV
Subjt:  MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHV

Query:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE
        SRLLKLDM++VLGELERQEEVALAVKIFRLI+KQDWYKPDV++YKDLIIALA SKKMDDAM+LWESMR+E+LFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+V+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.4e-4645.86Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE
        + KE L   + LKR +    + ++F+ SHVSRLLK D+V+VL E +RQ +V L +K++ ++R++ WY+PD++ Y+D+++ LAR+KK+D+  K+WE +++E
Subjt:  IGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE

Query:  NLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEI
         +  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF ELFP   V+DPPE+I
Subjt:  NLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEI

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic2.3e-0929.11Show/hide
Query:  RSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWE
        ++ K   ++A+ +I   +  K   EK     K    +LL   ++  L E         A+++F L+R+Q WYKP+V IY  LI+ L + K+ + A +L++
Subjt:  RSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWE

Query:  SMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPD-PPDELPFRILLKGLL
         M  E    + + YT ++  + R G    A  + E MK S +  PD   + IL+K  L
Subjt:  SMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPD-PPDELPFRILLKGLL

Q9FMQ1 Pentatricopeptide repeat-containing protein At5g12100, mitochondrial3.9e-0931.54Show/hide
Query:  EVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLK
        +V   +++F  + K D   P V+IY  LI  L + K+M+DA +L++ M    L P   TY  +I G+ + G+P  +  V E MK     P  + F  LLK
Subjt:  EVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLK

Query:  GLLPHPLLRN--RVKQDFEEL--FPDQHVF
        GL    ++ +   V ++ ++L   PD   F
Subjt:  GLLPHPLLRN--RVKQDFEEL--FPDQHVF

Q9LUR2 Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial2.5e-0832.65Show/hide
Query:  AVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGL
        A ++F L+ +   Y P+  IY  LI    +SK+++D MK++  M ++ +  ++ TYT +I+G+   G P  A  V+  M     PPD   + +LL GL
Subjt:  AVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGL

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic4.2e-9668.38Show/hide
Query:  AIRWFSRSKLPVFASVFLQGLTRRP-IRDVPLPVKSTITDFQPDSRRPIWGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSH
        AIR  SR K P FAS+F Q +TR P I  +        T   P   +P   F   +HDGRPRGPLWR +K IGKEALFVI GLKR KED+EK +KF+K+H
Subjt:  AIRWFSRSKLPVFASVFLQGLTRRP-IRDVPLPVKSTITDFQPDSRRPIWGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSH

Query:  VSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVY
        V RLLKLDM+AV+GELERQEE ALA+K+F +I+KQ+WY+PDV++YKDLI++LA+SK+MD+AM LWE M++ENLFPDSQTYTEVIRGFLR G P+DAMNVY
Subjt:  VSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVY

Query:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIF
        EDM KSPDPP+ELPFR+LLKGLLPHPLLRN+VK+DFEELFP++H +DPPEEIF
Subjt:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIF

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein9.7e-4845.86Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE
        + KE L   + LKR +    + ++F+ SHVSRLLK D+V+VL E +RQ +V L +K++ ++R++ WY+PD++ Y+D+++ LAR+KK+D+  K+WE +++E
Subjt:  IGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE

Query:  NLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEI
         +  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF ELFP   V+DPPE+I
Subjt:  NLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEI

AT1G77340.1 Pentatricopeptide repeat (PPR) superfamily protein2.7e-1032.04Show/hide
Query:  RQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRI
        R++EV  A K+F+ + +   ++ +V  Y  LI  L  +KK+D+A+ L   M+++N  P+ +TYT +I      G  S+AMN+++ M +S   PD+  + +
Subjt:  RQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRI

Query:  LLK
        L++
Subjt:  LLK

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein3.0e-9768.38Show/hide
Query:  AIRWFSRSKLPVFASVFLQGLTRRP-IRDVPLPVKSTITDFQPDSRRPIWGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSH
        AIR  SR K P FAS+F Q +TR P I  +        T   P   +P   F   +HDGRPRGPLWR +K IGKEALFVI GLKR KED+EK +KF+K+H
Subjt:  AIRWFSRSKLPVFASVFLQGLTRRP-IRDVPLPVKSTITDFQPDSRRPIWGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSH

Query:  VSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVY
        V RLLKLDM+AV+GELERQEE ALA+K+F +I+KQ+WY+PDV++YKDLI++LA+SK+MD+AM LWE M++ENLFPDSQTYTEVIRGFLR G P+DAMNVY
Subjt:  VSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVY

Query:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIF
        EDM KSPDPP+ELPFR+LLKGLLPHPLLRN+VK+DFEELFP++H +DPPEEIF
Subjt:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIF

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain5.2e-1732.55Show/hide
Query:  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYK
        R PL R R  +  EA+  +Q LKR                       ++ + S   RLLK DMVAVL EL RQ E +LA+K+F  IRK+ WYKP V +Y 
Subjt:  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYK

Query:  DLIIALARSKKMDDAMKLWESMR-EENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPL--LRNRVKQDFEELFPDQ
        D+I  +A +  M++   L+ +M+ E+ L  + + +  ++   L +      M+ Y  M+     PD   FR+L+ GL  +    L   V+QD  E + + 
Subjt:  DLIIALARSKKMDDAMKLWESMR-EENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPL--LRNRVKQDFEELFPDQ

Query:  HVF-DPPEEIFS
          F +  EEI S
Subjt:  HVF-DPPEEIFS

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-1029.11Show/hide
Query:  RSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWE
        ++ K   ++A+ +I   +  K   EK     K    +LL   ++  L E         A+++F L+R+Q WYKP+V IY  LI+ L + K+ + A +L++
Subjt:  RSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWE

Query:  SMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPD-PPDELPFRILLKGLL
         M  E    + + YT ++  + R G    A  + E MK S +  PD   + IL+K  L
Subjt:  SMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPD-PPDELPFRILLKGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCGGTGGTTTTCCAGGTCGAAATTGCCCGTTTTTGCTTCGGTATTCCTACAGGGTTTAACGAGGAGACCAATTAGAGATGTCCCATTACCAGTTAAATCGAC
GATCACTGACTTTCAGCCGGATTCCAGGCGACCCATCTGGGGATTCCGGCTATATCACGACGGGAGGCCTCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGTAAAG
AAGCACTTTTCGTTATTCAAGGATTGAAGAGATTCAAGGAAGATGAAGAGAAATTCGAAAAGTTCATGAAGAGTCATGTTTCAAGGCTCTTGAAATTGGATATGGTTGCT
GTGCTTGGTGAACTCGAGCGGCAGGAGGAGGTTGCTTTAGCTGTCAAGATATTTAGGTTGATTCGGAAGCAAGACTGGTACAAGCCTGATGTTTATATATATAAAGACTT
GATTATTGCATTAGCTAGAAGTAAAAAGATGGATGACGCAATGAAATTATGGGAAAGCATGAGAGAGGAAAATTTATTCCCTGACTCTCAAACGTATACTGAAGTCATCA
GAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACGTATATGAGGATATGAAGAAGTCTCCAGATCCACCAGACGAGTTGCCATTTAGAATTTTGTTGAAAGGT
CTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGACTTTGAGGAGCTCTTTCCTGACCAGCATGTGTTCGATCCCCCAGAAGAGATATTCAGCCTACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTCGGTGGTTTTCCAGGTCGAAATTGCCCGTTTTTGCTTCGGTATTCCTACAGGGTTTAACGAGGAGACCAATTAGAGATGTCCCATTACCAGTTAAATCGAC
GATCACTGACTTTCAGCCGGATTCCAGGCGACCCATCTGGGGATTCCGGCTATATCACGACGGGAGGCCTCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGTAAAG
AAGCACTTTTCGTTATTCAAGGATTGAAGAGATTCAAGGAAGATGAAGAGAAATTCGAAAAGTTCATGAAGAGTCATGTTTCAAGGCTCTTGAAATTGGATATGGTTGCT
GTGCTTGGTGAACTCGAGCGGCAGGAGGAGGTTGCTTTAGCTGTCAAGATATTTAGGTTGATTCGGAAGCAAGACTGGTACAAGCCTGATGTTTATATATATAAAGACTT
GATTATTGCATTAGCTAGAAGTAAAAAGATGGATGACGCAATGAAATTATGGGAAAGCATGAGAGAGGAAAATTTATTCCCTGACTCTCAAACGTATACTGAAGTCATCA
GAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACGTATATGAGGATATGAAGAAGTCTCCAGATCCACCAGACGAGTTGCCATTTAGAATTTTGTTGAAAGGT
CTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGACTTTGAGGAGCTCTTTCCTGACCAGCATGTGTTCGATCCCCCAGAAGAGATATTCAGCCTACGTTGA
Protein sequenceShow/hide protein sequence
MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVA
VLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKG
LLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR