; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G8141 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8141
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionStructure-specific endonuclease subunit SLX1 homolog
Genome locationctg1557:1051742..1058335
RNA-Seq ExpressionCucsat.G8141
SyntenyCucsat.G8141
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010052 - guard cell differentiation (biological process)
GO:0051569 - regulation of histone H3-K4 methylation (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016593 - Cdc73/Paf1 complex (cellular component)
GO:0033557 - Slx1-Slx4 complex (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
GO:0008821 - crossover junction endodeoxyribonuclease activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060004.1 Structure-specific endonuclease subunit SLX1 [Cucumis melo var. makuwa]1.72e-26694.24Show/hide
Query:  DEEKEDD-EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAV
        DEEKEDD EEEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAV
Subjt:  DEEKEDD-EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAV

Query:  RSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYG
        RSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQ +LENE DWEY+RE EEIC F+VYG
Subjt:  RSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYG

Query:  SMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQL
        SMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETNEQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC VAGTSRTEI+IDD EENQ 
Subjt:  SMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQL

Query:  EGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        EGS MNLQEQPGR+NLTSGIASEISKVSR +NG VPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  EGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

KGN66284.2 hypothetical protein Csa_023148 [Cucumis sativus]3.50e-25599.13Show/hide
Query:  IGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNY
        I  +VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNY
Subjt:  IGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNY

Query:  FSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETN
        FSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETN
Subjt:  FSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETN

Query:  EQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTV
        EQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTV
Subjt:  EQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTV

Query:  EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

XP_004153269.1 structure-specific endonuclease subunit SLX1 homolog [Cucumis sativus]1.80e-297100Show/hide
Query:  MRKRKEKPEICKTTDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQF
        MRKRKEKPEICKTTDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQF
Subjt:  MRKRKEKPEICKTTDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQF

Query:  EWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYN
        EWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYN
Subjt:  EWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYN

Query:  REREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSR
        REREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSR
Subjt:  REREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSR

Query:  TEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        TEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  TEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

XP_008457313.1 PREDICTED: uncharacterized protein LOC103497035 [Cucumis melo]5.53e-27393.02Show/hide
Query:  MRKRKEKPEICKTT-----DEEKEDD-EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKT      DEEKEDD EEEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTT-----DEEKEDD-EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQ +LENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENE

Query:  GDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCI
         DWEY+RE EEIC F+VYGSMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETNEQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC 
Subjt:  GDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCI

Query:  VAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEI+IDD EENQ EGS MNLQEQPGR+NLTSGIASEISKVSR +NG VPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

XP_038894793.1 structure-specific endonuclease subunit SLX1 [Benincasa hispida]4.62e-23783.29Show/hide
Query:  MRKRKEKPEICKT---TDEEKEDDE---EEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKE+PEI KT    +EEKEDDE   EEE  NEVNGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKT---TDEEKEDDE---EEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW  LNITVNYFSTK+MKNAAGCPSLP+HMKVQVSPINELPCYSEGDQ +LENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENE

Query:  GDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCI
         DWEYNRE EEIC FRVYGSMKEVSNEVPQKLMD+Q  TDGRP   L GCDKE E NEQVPPSSC PSYID GMSYDL  CDE LE DERE ASC  SCI
Subjt:  GDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCI

Query:  VAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        V   SRTEI+IDD +E+Q+EG+ MNL++Q  R+NL+SGIASEISKVSR N   +P VEYEVIDVSTPSPDCRT+SHR KR+VTSG+SE+IDLTKSPTFIQ
Subjt:  VAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0M0Y6 Structure-specific endonuclease subunit SLX1 homolog8.71e-298100Show/hide
Query:  MRKRKEKPEICKTTDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQF
        MRKRKEKPEICKTTDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQF
Subjt:  MRKRKEKPEICKTTDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQF

Query:  EWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYN
        EWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYN
Subjt:  EWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYN

Query:  REREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSR
        REREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSR
Subjt:  REREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSR

Query:  TEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        TEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  TEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

A0A1S3C574 Structure-specific endonuclease subunit SLX1 homolog2.68e-27393.02Show/hide
Query:  MRKRKEKPEICKTT-----DEEKEDD-EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKT      DEEKEDD EEEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTT-----DEEKEDD-EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQ +LENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENE

Query:  GDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCI
         DWEY+RE EEIC F+VYGSMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETNEQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC 
Subjt:  GDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCI

Query:  VAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEI+IDD EENQ EGS MNLQEQPGR+NLTSGIASEISKVSR +NG VPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

A0A5D3BBR0 Structure-specific endonuclease subunit SLX1 homolog8.32e-26794.24Show/hide
Query:  DEEKEDD-EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAV
        DEEKEDD EEEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAV
Subjt:  DEEKEDD-EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAV

Query:  RSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYG
        RSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQ +LENE DWEY+RE EEIC F+VYG
Subjt:  RSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYG

Query:  SMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQL
        SMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETNEQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC VAGTSRTEI+IDD EENQ 
Subjt:  SMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQL

Query:  EGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        EGS MNLQEQPGR+NLTSGIASEISKVSR +NG VPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  EGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

A0A6J1HZQ2 Structure-specific endonuclease subunit SLX1 homolog4.80e-20677.31Show/hide
Query:  MRKRKEKPEICKT---TDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSA
        MR+RKEKPEI KT    +E+KEDDE+EERGNE NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMV CIYGFPTNVSA
Subjt:  MRKRKEKPEICKT---TDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDW
        LQFEWAWQHPNESLAVRSAAATFKSLSG+ANK+KLAYTMLTLPAW  LNITVNYFSTK+M NAAGCPSLP HM+VQ+SPI+ELPCYSEGD+ +LENE DW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDW

Query:  EYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAG
        EYN+E EE+C  +V+G M EV NE+PQ LMDY TGTDGRP H LRG D+EL+ NEQVP SSCTPSYIDVG+SYDL  CDE      +E A C Q C V G
Subjt:  EYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAG

Query:  TSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRV
           TEI+IDD EENQLEGS M LQ+QPGR+   SGIA+EISKVS      +P VEYEVIDVSTPSP CRTSSH+FKRR+
Subjt:  TSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRV

A0A6J1I681 Structure-specific endonuclease subunit SLX1 homolog8.92e-20677.31Show/hide
Query:  MRKRKEKPEICKT---TDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSA
        MR+RKEKPEI KT    +E+KEDDE+EERGNE NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMV CIYGFPTNVSA
Subjt:  MRKRKEKPEICKT---TDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDW
        LQFEWAWQHPNESLAVRSAAATFKSLSG+ANK+KLAYTMLTLPAW  LNITVNYFSTK+M NAAGCPSLP HM+VQ+SPI+ELPCYSEGD+ +LENE DW
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDW

Query:  EYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAG
        EYN+E EE+C  +V+G M EV NE+PQ LMDY TGTDGRP H LRG D+EL+ NEQVP SSCTPSYIDVG+SYDL  CDE      +E A C Q C V G
Subjt:  EYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAG

Query:  TSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRV
           TEI+IDD EENQLEGS M LQ+QPGR+   SGIA+EISKVS      +P VEYEVIDVSTPSP CRTSSH+FKRR+
Subjt:  TSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRV

SwissProt top hitse value%identityAlignment
A7STV9 Structure-specific endonuclease subunit SLX1 homolog1.9e-2640.94Show/hide
Query:  NGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEI-RCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLS-GVAN
        +GF   YLL    P+FKGHTYIG+TVNP RRI+QHNG + + GA++T RK+PW M+L ++GFP ++ ALQFEWAWQ P  S  ++SAA   K     V  
Subjt:  NGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEI-RCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLS-GVAN

Query:  KVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI
          ++   +L +  W  L + + +   ++          P HM V   P+
Subjt:  KVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI

Q0IH86 Structure-specific endonuclease subunit slx12.9e-2738.31Show/hide
Query:  EVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA
        EV GF+  YLL    P++KG  YIGFTVNP+RRI+QHN G+ + GAW+T  + PW+MVL ++GFP +++AL+FEWAWQHP+ S  +       K  S   
Subjt:  EVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA

Query:  NKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELP
          + +   ML +  W  L +T+ +   ++ +        P HM +    +   P
Subjt:  NKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELP

Q32PI0 Structure-specific endonuclease subunit SLX15.8e-2842.07Show/hide
Query:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR++QHN G  + GAWRT  + PWEMVL ++GFP+ V+AL+FEWAWQHP  S  +       +  +  A  ++
Subjt:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP
        +   ML  P W  L +T+ +    F ++   CP  P HM +   P
Subjt:  LAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP

Q5PQP5 Structure-specific endonuclease subunit SLX13.1e-2940.24Show/hide
Query:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MVL ++GFP+ V+AL+FEWAWQHP  S  +       +S +     ++
Subjt:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------INELPCYSEGDQD
        +   ML +P W  L +TV +    F      CP+ P HM +   P      + + P  SE D +
Subjt:  LAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------INELPCYSEGDQD

Q8BX32 Structure-specific endonuclease subunit SLX11.0e-2940.85Show/hide
Query:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MVL I+GFP+ V+AL+FEWAWQHP  S  +       +S +  A  ++
Subjt:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------INELPCYSEGDQD
        +   ML +P W  L +T+ +    F      CP+ P HM +   P      + + P  SE D +
Subjt:  LAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------INELPCYSEGDQD

Arabidopsis top hitse value%identityAlignment
AT2G30350.1 Excinuclease ABC, C subunit, N-terminal3.2e-3436.1Show/hide
Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSE-GDQDMLENEGD
        LQFEWAWQHP ES+AVR AAA FKS SGVA+K+KL YTML LPAW  LN+TVNYFS+K+  +    PSLP HMKVQV  + +L  +++  D    E+E  
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSE-GDQDMLENEGD

Query:  WEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGR-------PPHVLRGCDK--------ELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLEN
         E N E ++           + S+ + Q      + +D R       P  V    D+         L+  E V       S+I VG         E + N
Subjt:  WEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGR-------PPHVLRGCDK--------ELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLEN

Query:  DEREAASCGQSCIVAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKS
        D   + +C            EIV D+     +  +    +E   R N  +   +E              V+ EVID+ TPSP CR  S   +RRV    S
Subjt:  DEREAASCGQSCIVAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKS

Query:  EMIDLTKSPTFIQ
        E IDLT SP FI+
Subjt:  EMIDLTKSPTFIQ

AT2G30350.2 Excinuclease ABC, C subunit, N-terminal6.7e-7243.96Show/hide
Query:  EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK
        E+   G +  GFF+CYLL S  PR KG TYIGFTVNP+RRIRQHNGEI  GAWRTK+KRPWEMVLCIYGFPTNVSALQFEWAWQHP ES+AVR AAA FK
Subjt:  EEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK

Query:  SLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSE-GDQDMLENEGDWEYNREREEICGFRVYGSMKEVSN
        S SGVA+K+KL YTML LPAW  LN+TVNYFS+K+  +    PSLP HMKVQV  + +L  +++  D    E+E   E N E ++           + S+
Subjt:  SLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSE-GDQDMLENEGDWEYNREREEICGFRVYGSMKEVSN

Query:  EVPQKLMDYQTGTDGR-------PPHVLRGCDK--------ELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVI
         + Q      + +D R       P  V    D+         L+  E V       S+I VG         E + ND   + +C            EIV 
Subjt:  EVPQKLMDYQTGTDGR-------PPHVLRGCDK--------ELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVI

Query:  DDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        D+     +  +    +E   R N  +   +E              V+ EVID+ TPSP CR  S   +RRV    SE IDLT SP FI+
Subjt:  DDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

AT5G43210.1 Excinuclease ABC, C subunit, N-terminal4.0e-0841.67Show/hide
Query:  FSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQ
        +S YL+ S     K  TY+G T +  RR++QHNGEIR GA  +   RPW     I GF     A  FE  W+
Subjt:  FSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAAGAGGAAAGAGAAACCGGAAATCTGTAAAACCACGGATGAGGAGAAGGAAGACGATGAAGAAGAAGAGAGAGGAAACGAAGTGAATGGCTTCTTTTCATGCTA
TCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAACCCGAAGCGCAGAATCAGACAACACAATGGTGAGATTAGATGCGGTGCTT
GGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCTACTAATGTTTCTGCTCTTCAGTTTGAATGGGCGTGGCAGCATCCTAATGAGTCA
CTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATACACAATGCTCACACTTCCTGCTTGGCGTGGTTTAAATAT
AACTGTAAACTACTTCTCTACAAAGTTCATGAAGAATGCGGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCCCCCATCAATGAGCTTCCATGCTATT
CCGAAGGAGATCAAGATATGCTTGAAAATGAAGGTGACTGGGAGTATAATCGAGAACGTGAAGAAATTTGTGGTTTTCGAGTGTATGGATCAATGAAAGAAGTTTCAAAT
GAAGTTCCTCAAAAGTTAATGGATTATCAGACAGGTACAGATGGAAGACCTCCTCACGTGTTGCGTGGATGTGATAAGGAGCTTGAGACCAATGAACAAGTGCCACCTTC
TTCATGTACTCCGTCTTATATTGATGTGGGTATGTCTTATGACTTGTGTGCATGTGATGAAGGACTCGAGAATGATGAAAGAGAGGCAGCTTCGTGTGGTCAGTCTTGCA
TTGTAGCAGGTACATCTAGAACTGAAATTGTCATTGATGACGAAGAGGAAAACCAATTAGAAGGGAGTAGTATGAACTTGCAGGAGCAACCAGGTAGGGAGAATTTAACA
TCAGGAATAGCTTCTGAAATCAGTAAAGTTTCAAGGTGGAACAATGGCTGGGTTCCAACTGTTGAGTATGAGGTTATCGATGTGTCTACCCCGTCTCCAGACTGCCGAAC
AAGTTCGCATAGATTCAAGAGAAGAGTTACTTCCGGTAAGTCTGAGATGATTGACTTGACTAAATCTCCTACATTTATTCAATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGAAGAGGAAAGAGAAACCGGAAATCTGTAAAACCACGGATGAGGAGAAGGAAGACGATGAAGAAGAAGAGAGAGGAAACGAAGTGAATGGCTTCTTTTCATGCTA
TCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAACCCGAAGCGCAGAATCAGACAACACAATGGTGAGATTAGATGCGGTGCTT
GGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCTACTAATGTTTCTGCTCTTCAGTTTGAATGGGCGTGGCAGCATCCTAATGAGTCA
CTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATACACAATGCTCACACTTCCTGCTTGGCGTGGTTTAAATAT
AACTGTAAACTACTTCTCTACAAAGTTCATGAAGAATGCGGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCCCCCATCAATGAGCTTCCATGCTATT
CCGAAGGAGATCAAGATATGCTTGAAAATGAAGGTGACTGGGAGTATAATCGAGAACGTGAAGAAATTTGTGGTTTTCGAGTGTATGGATCAATGAAAGAAGTTTCAAAT
GAAGTTCCTCAAAAGTTAATGGATTATCAGACAGGTACAGATGGAAGACCTCCTCACGTGTTGCGTGGATGTGATAAGGAGCTTGAGACCAATGAACAAGTGCCACCTTC
TTCATGTACTCCGTCTTATATTGATGTGGGTATGTCTTATGACTTGTGTGCATGTGATGAAGGACTCGAGAATGATGAAAGAGAGGCAGCTTCGTGTGGTCAGTCTTGCA
TTGTAGCAGGTACATCTAGAACTGAAATTGTCATTGATGACGAAGAGGAAAACCAATTAGAAGGGAGTAGTATGAACTTGCAGGAGCAACCAGGTAGGGAGAATTTAACA
TCAGGAATAGCTTCTGAAATCAGTAAAGTTTCAAGGTGGAACAATGGCTGGGTTCCAACTGTTGAGTATGAGGTTATCGATGTGTCTACCCCGTCTCCAGACTGCCGAAC
AAGTTCGCATAGATTCAAGAGAAGAGTTACTTCCGGTAAGTCTGAGATGATTGACTTGACTAAATCTCCTACATTTATTCAATTGTAG
Protein sequenceShow/hide protein sequence
MRKRKEKPEICKTTDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNES
LAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYGSMKEVSN
EVPQKLMDYQTGTDGRPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLT
SGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL