CuGenDBv2

Gene ID	Cucsat.G8281
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Binding partner of ACD11 1-like
Genome location	ctg1557:4164902..4168451
RNA-Seq Expression	Cucsat.G8281
Synteny	Cucsat.G8281
Gene Ontology terms	GO:0050832 - defense response to fungus (biological process) GO:0005634 - nucleus (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR034360 - Vip1-like, RNA recognition motif, plant IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039508.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa]

6.69e-167

97.64

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Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESD+WNSPAQMTNDNTS
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        LM T+IMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIN+GMETVKYIDEKFHVSDITRSAAAVTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
        TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGK+ SK
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

TYK15262.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa]

2.54e-163

98.39

Show/hide

Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESD+WNSPAQMTNDNTS
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        LM T+IMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIN+GMETVKYIDEKFHVSDITRSAAAVTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG
        TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG

XP_004148690.1 binding partner of ACD11 1 [Cucumis sativus]

2.09e-170

100

Show/hide

Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
        TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

XP_022134513.1 binding partner of ACD11 1 [Momordica charantia]

3.91e-151

89.76

Show/hide

Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MY GGYTAEVTSLSPKATE DVYDFFSHCG VEHVEILRSG+YACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG YIDESD+ NSP++ T+DNTS
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        LM T+IMHSV+TPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTE I++GMETVKYIDEKFHVSDITRSAAAVTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
        TAAVVAVT+TGKAAMAAGNA++NSSYFSKGALWVSDMLSRAA AAA+ GK+ SK
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

XP_038890704.1 binding partner of ACD11 1 [Benincasa hispida]

1.31e-157

92.91

Show/hide

Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MY+ GYTAEVTSLSPKATENDVYDFFSHCG VEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG YIDESD+WNS + +TNDNTS
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        LM T+IMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETI++GMETVKYIDEKFHVSDITRSAAAVTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
        TAAVVAVTVTGKAAMAAGNAVINSSYF+KGALWVSDMLSRAAKAAAE G + SK
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KS66 RRM domain-containing protein

5.95e-196

98.97

Show/hide

Query:  LSNSVGVVDISVFSKQTGGTPQVFCSNSSFQHRKLCETMYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAIL
        LS   GVVDISVFSKQTGGTPQVFCSNSSFQHRKLCETMYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAIL
Subjt:  LSNSVGVVDISVFSKQTGGTPQVFCSNSSFQHRKLCETMYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAIL

Query:  LSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYEL
        LSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYEL
Subjt:  LSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYEL

Query:  SNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
        SNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
Subjt:  SNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

A0A5A7T9G0 Binding partner of ACD11 1-like

3.24e-167

97.64

Show/hide

Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESD+WNSPAQMTNDNTS
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        LM T+IMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIN+GMETVKYIDEKFHVSDITRSAAAVTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
        TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGK+ SK
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

A0A5D3CUV4 Binding partner of ACD11 1-like

1.23e-163

98.39

Show/hide

Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESD+WNSPAQMTNDNTS
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        LM T+IMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIN+GMETVKYIDEKFHVSDITRSAAAVTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG
        TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG

A0A6J1C268 binding partner of ACD11 1

1.89e-151

89.76

Show/hide

Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MY GGYTAEVTSLSPKATE DVYDFFSHCG VEHVEILRSG+YACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG YIDESD+ NSP++ T+DNTS
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        LM T+IMHSV+TPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTE I++GMETVKYIDEKFHVSDITRSAAAVTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
        TAAVVAVT+TGKAAMAAGNA++NSSYFSKGALWVSDMLSRAA AAA+ GK+ SK
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

A0A6J1GLT3 binding partner of ACD11 1-like isoform X2

7.34e-145

83.91

Show/hide

Query:  HRKLCETMYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQ
        H +L  TMY+GGYTAEVTSLSPKATENDVYDFFSHCG V+HVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFI RWG Y DES +WN+P+Q
Subjt:  HRKLCETMYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQ

Query:  MTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITR
        MT++NTS M  +IMHS +TPGEAVT+AQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKV ELSNRIGLT+ I++GMETVKYIDEK+HVSDITR
Subjt:  MTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITR

Query:  SAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK
        S A VTGTAAVVA+ V GKAAMAAG AV+NSSYFSKGALWVSDMLSRA+KAAAE G   SK
Subjt:  SAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

SwissProt top hits

e value

%identity

Alignment

P87216 Protein vip1

1.4e-05

26.96

Show/hide

Query:  VTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHS
        VT++SP+ TE  + DFFS CG V ++   +SG+   TA + F    A +TA+LL  A +    + I+          S +  A  T D       +    
Subjt:  VTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHS

Query:  VHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA-------TAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTA
           P  A      ++  +LS+GY L+   L K+   D S  VS+       +A + V  ++ R  +TE  N        +D KF +SD     +++  T 
Subjt:  VHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA-------TAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTA

Query:  AVVAVTVTGKAAMAAGNAVINSSYFSKGAL
           A+     A  +AG  V N+    K  L
Subjt:  AVVAVTVTGKAAMAAGNAVINSSYFSKGAL

Q9LFD5 Binding partner of ACD11 1

4.5e-25

34.27

Show/hide

Query:  TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKI
        + +V +LS  ATE+D+ +FFS  G VE ++I +S ++  +AYVTF++    ETA+LLSGA I DQ V        I+ + +++ PA    +  S  A  +
Subjt:  TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKI

Query:  MHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETVKYIDEKFHVSDITRSAAAVTGTA
                  V  A+ VV +ML+KG++L KDA+ KAKAFD+    ++TA A V  L  +IGL++ + +G     E +K +D+ F V++ T+S  A     
Subjt:  MHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETVKYIDEKFHVSDITRSAAAVTGTA

Query:  AVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGK
                 +   +AG+AV+ + Y   G  W +   +R A+AA E G+
Subjt:  AVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGK

Arabidopsis top hits

e value

%identity

Alignment

AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein

4.9e-59

51.43

Show/hide

Query:  GYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMAT
        GY  EVT LSP  T ND+ DFFS  GT++ ++I+RSG+ ACTAYV F+D+++ ETA+LL+GA ILDQ V I+RWG + +E D WN+ ++   D +     
Subjt:  GYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMAT

Query:  KIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTAAV
            S    GEAVT AQ+VVK ML+ G+VL KDAL KAKAFD+S  VSA A A+V +L  RIGLT+ I +G+E V+  D+++HVSD  +S          
Subjt:  KIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTAAV

Query:  VAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG
         AV  TG+ A AA  +V+NSSYFS GALW+S  L RAAKAA++ G
Subjt:  VAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG

AT3G01210.1 RNA-binding (RRM/RBD/RNP motifs) family protein

3.1e-66

56.22

Show/hide

Query:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS
        MY  GY A+VT+LSP+ATE DV+ FFSHCG VE VEI      A TAYVTFRDA+AL+ A+LLSGA I+DQ V+IS +G Y+ ES++         ++ S
Subjt:  MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTS

Query:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG
        +  T+      +PGEA+T+AQQVV+TML+KGYVL+KDA+ KAKA D+S + S+  A K+ E+S+ +GLT+ I S ME V+  DEK+H SD T+SA  VTG
Subjt:  LMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTG

Query:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG
        TAAV A T+TGK A AA  +V+NS YF+ GALW SD L RAAKAAA  G
Subjt:  TAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein

5.2e-29

33.73

Show/hide

Query:  TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKI
        T +V+++S  AT+ D+ +FFS  G + ++E     +    AYVTF+D    ETA+LLSGA I+D  V +S    Y           Q++ +  + +  K 
Subjt:  TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKI

Query:  MHSVHTPGEAV-TMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETVKYIDEKFHVSDITRSAAAVTGT
         +     G++V   A+ VV +ML+KG++L KDA+ KAK+ D+  Q+++TA+AKV     +IG T+ IN+G     E V+ +D+K+ VS+ T+S       
Subjt:  MHSVHTPGEAV-TMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETVKYIDEKFHVSDITRSAAAVTGT

Query:  AAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGK
            A+    +    AG+A++ + Y   GA WV+   ++ AKAA E G+
Subjt:  AAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein

3.1e-29

35.6

Show/hide

Query:  TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKI
        + +V ++S  ATE ++++FFS  G +EH+EI +    +  A+VTF D  ALE A+LLSGA I+DQ V I+R   Y+   ++             L  +  
Subjt:  TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKI

Query:  MHSVHTPGEA---VTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETVKYIDEKFHVSDITRSAAAVT
            +  G +   V+ AQ VV T+L+KG  L +DA+ KAKAFD+  Q+ A A+AKV     R+GLTE ++ G+    E VK +D+K  VSD T       
Subjt:  MHSVHTPGEA---VTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETVKYIDEKFHVSDITRSAAAVT

Query:  GTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG
            + A+    +     G+AV +S Y + GA W S   S+ A+    AG
Subjt:  GTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAG

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

7.3e-31

35.89

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Query:  TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKI
        T +V+++S +ATE D+ +FFS  G + ++E     D +  AYVTF+D    ETA+LL+G+ I+D  V ++    Y    D+  S   +   N S   T+ 
Subjt:  TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKI

Query:  MHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSG----METVKYIDEKFHVSDITRSAAAVTGTA
          SV         A+ VV  M+SKG+VL KDA+ KAK+ D+  Q+++TA+A+V     RIG TE IN+G     E VK +D+KF V++ T+S        
Subjt:  MHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSG----METVKYIDEKFHVSDITRSAAAVTGTA

Query:  AVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGK
           A+    +    AG+A++ + Y   GA WV+   +R +KAA E G+
Subjt:  AVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGK

Sequences

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CDS sequence

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TCTCTCTCTGAGCTTTCAAACAGTGTAGGGGTAGTTGATATTTCAGTTTTCTCTAAACAAACTGGTGGAACACCCCAGGTATTTTGCTCTAATTCAAGTTTTCAACATAG
AAAGCTGTGTGAAACAATGTACAATGGGGGCTATACTGCTGAAGTTACAAGTTTGTCACCGAAAGCCACAGAGAATGATGTTTATGACTTTTTCTCTCATTGTGGCACGG
TCGAGCACGTAGAAATCCTCAGATCAGGCGATTATGCATGTACTGCTTACGTGACCTTTCGAGATGCTTTTGCTCTGGAAACTGCTATATTACTTAGTGGAGCTGAAATC
CTTGATCAATGTGTGTTCATATCCCGGTGGGGAGCATACATAGATGAATCAGACAGTTGGAACAGCCCTGCGCAAATGACCAACGACAATACAAGCTTAATGGCGACCAA
AATAATGCATTCTGTTCACACACCAGGGGAAGCTGTTACCATGGCTCAACAAGTCGTAAAAACAATGCTATCAAAGGGATATGTGTTAACCAAAGATGCTCTTGTAAAGG
CTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGAGCTTAGCAATAGGATTGGACTCACTGAGACAATTAATTCTGGCATGGAAACC
GTTAAGTACATCGACGAGAAGTTTCACGTTTCCGATATCACTAGATCCGCTGCAGCAGTAACTGGAACAGCAGCTGTGGTGGCGGTGACTGTGACAGGGAAAGCAGCAAT
GGCAGCAGGGAATGCTGTTATAAACAGCAGCTACTTTTCTAAGGGCGCACTTTGGGTTTCGGATATGTTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGCAGGTAAGAGTA
TCAGTAAATGA

mRNA sequence

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Protein sequence

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SLSELSNSVGVVDISVFSKQTGGTPQVFCSNSSFQHRKLCETMYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEI
LDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMET
VKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK

Cucsat.G8281 (gene) of Cucumber (B10) v3 genome