CuGenDBv2

Gene ID	Cucsat.G8355
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Rab5-interacting
Genome location	ctg1557:170468..172362
RNA-Seq Expression	Cucsat.G8355
Synteny	Cucsat.G8355
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

5.22e-86

100

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Query:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
        MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
Subjt:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV

Query:  LLQEGLFASITLFLLMWTLIYSLGHF
        LLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  LLQEGLFASITLFLLMWTLIYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

6.07e-83

96.06

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

2.03e-81

93.7

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

5.84e-81

92.91

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

6.07e-83

96.85

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQ QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

2.53e-86

100

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Query:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
        MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
Subjt:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV

Query:  LLQEGLFASITLFLLMWTLIYSLGHF
        LLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  LLQEGLFASITLFLLMWTLIYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

2.94e-83

96.06

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

A0A5A7VQ84 Rab5-interacting

1.05e-73

95.69

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLL
        VLLQEGLFAS+TLFLL
Subjt:  VLLQEGLFASITLFLL

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

9.85e-82

93.7

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

2.83e-81

92.91

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

4.4e-14

36.04

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Query:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL
        NG L     +K+   + +W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL

Query:  LMWTLIYSLGH
        +     ++ GH
Subjt:  LMWTLIYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

1.6e-16

37.5

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Query:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL
        NG L     +K+   + +W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL

Query:  LMWTLIYSLGHF
        ++W + Y+  H+
Subjt:  LMWTLIYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

1.2e-46

64.66

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Query:  MKDGKSMKVNSQLQ-------QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEE
        MK+GKS K +SQ +       QN HL  F  AKLFD E SWDKDQLGDVLHW+RQ V L+CGLLWG+IPLVGG+W +LFL IS+ ++YGYYA++LK+DEE
Subjt:  MKDGKSMKVNSQLQ-------QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASITLFLLMWTLIYSLGHF
        +FGGH  LLQ+GLFAS++LFLL W L+YSL  F
Subjt:  EFGGHGVLLQEGLFASITLFLLMWTLIYSLGHF

AT5G59410.1 Rab5-interacting family protein

3.9e-50

72.31

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Query:  MKDGKSMKVNSQLQ----QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFG
        MK+ KS K+N   Q    QN HL P KLAKLFDP+ SWDKDQLGDVLHW+RQ V L+ GLLWGSIPLVGG+W ILFL IS+ ++YGYYAMILKVDEE+FG
Subjt:  MKDGKSMKVNSQLQ----QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASITLFLLMWTLIYSLGHF
        GH  LLQEGLFAS+TLFLL W L+YSL HF
Subjt:  GHGVLLQEGLFASITLFLLMWTLIYSLGHF

Sequences

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CDS sequence

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ATGAAGGACGGGAAATCTATGAAAGTCAATTCTCAGTTGCAGCAGAATGGTCACTTGCCGCCCTTCAAATTGGCTAAGTTGTTCGATCCAGAGACTTCATGGGATAAGGA
TCAACTAGGAGATGTGTTGCATTGGATGAGACAATCAGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAGTTTGGTTCATCTTATTCTTGG
TGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAGGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATA
ACACTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACATTTCTGA

mRNA sequence

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Protein sequence

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MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASI
TLFLLMWTLIYSLGHF

Cucsat.G8355 (gene) of Cucumber (B10) v3 genome