CuGenDBv2

Gene ID	Cucsat.G8458
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	ctg1557:2615814..2634272
RNA-Seq Expression	Cucsat.G8458
Synteny	Cucsat.G8458
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0070940 - dephosphorylation of RNA polymerase II C-terminal domain (biological process) GO:0005634 - nucleus (cellular component) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function) GO:0008420 - RNA polymerase II CTD heptapeptide repeat phosphatase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039269.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa]

0.0

96.68

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Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQV-FDLVNQE
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQV FDLVN E
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQV-FDLVNQE

Query:  AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS
        AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS
Subjt:  AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS

Query:  NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKT
        NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD YQMNNVTKT
Subjt:  NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKT

Query:  QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

XP_008459609.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo]

0.0

96.83

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD YQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

XP_011656092.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus]

0.0

100

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

XP_022987637.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0

91.39

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
        FRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+ENPLER KNESTN SNQS +  EKEFTNDDEYIKETNSLLRQVHHAIFSEQVFD VN+EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ IL+N +LPFDSLDGIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP S LHP SI+ARTSD ++MN+VTK+Q
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAP+VVGLF GNSKD+YS NRY CDLADLPVIILLQVASQIILWLHEEAL WGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
         QGCLSWWLVMDDGLMEDRK NF  SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG GGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

XP_038889914.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida]

0.0

93.66

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDEDMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
        FRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLER KNESTN SNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQS QTVEGAN+ IL+NA+LPFDSLDGIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
        DRP S+LSRQSGQ +NDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+A TSD +QMNN+TK+Q
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLGHLSLEVLHSTLMDLVSLCSGVG SL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXX2 Mediator of RNA polymerase II transcription subunit 17

0.0

100

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0

96.83

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD YQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

A0A5A7TDC1 Mediator of RNA polymerase II transcription subunit 17

0.0

96.68

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQV-FDLVNQE
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQV FDLVN E
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQV-FDLVNQE

Query:  AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS
        AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS
Subjt:  AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKS

Query:  NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKT
        NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD YQMNNVTKT
Subjt:  NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKT

Query:  QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0

96.83

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD YQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

A0A6J1JAW7 Mediator of RNA polymerase II transcription subunit 17

0.0

91.39

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA
        FRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+ENPLER KNESTN SNQS +  EKEFTNDDEYIKETNSLLRQVHHAIFSEQVFD VN+EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ IL+N +LPFDSLDGIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP S LHP SI+ARTSD ++MN+VTK+Q
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQ

Query:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAP+VVGLF GNSKD+YS NRY CDLADLPVIILLQVASQIILWLHEEAL WGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
         QGCLSWWLVMDDGLMEDRK NF  SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG GGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

5.7e-214

59.03

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+L+DL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN
        S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  E D++  +   +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN

Query:  QEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFV
        +EAFN  VG N++G+REN++++SI QG S+F+SL PSG++    +       E+A+L  +S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F 
Subjt:  QEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFV

Query:  KSNDRPISSLSRQSGQVSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNV
        K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP SI+     + ++ DG      
Subjt:  KSNDRPISSLSRQSGQVSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNV

Query:  TKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHV
         KTQF TKVVV DDCI++E E  PNVVGL   +S +++S N+Y CD+ADLPV+IL QVASQI+ WL EEA   G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC
        +PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Subjt:  DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

4.1e-215

59.03

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+L+DL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN
        S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  E D++  +   +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN

Query:  QEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFV
        +EAFN  VG N++G+REN++++SI QG S+F+SL PSG++    +       E+A+L  +S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F 
Subjt:  QEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFV

Query:  KSNDRPISSLSRQSGQVSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNV
        K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP SI+     + ++ DG      
Subjt:  KSNDRPISSLSRQSGQVSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNV

Query:  TKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHV
         KTQF TKVVV DDCI++E E  PNVVGL   +S +++S N+Y CD+ADLPV+IL QVASQI+ WL EEA   G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC
        +PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Subjt:  DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGAAGACATGAAAGTTTCTCTTGACAAGCTTCCTGTTAAGCGCTTGGAGGCCATAGAAGAGAATGGTCTCGAACGATTTCCATCAGATGTTGGTTATGAAGAGAA
ACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCATGGCAATGGC
AGAGCATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAATGATGCAGTAACTGTGGCTGGAATGACAAGG
CCAAAACCATTACCTAATGAAGTTCTAGCAGATCTTGGAGTTTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTT
GGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAACTGGAAGGTTAAAAGGCAGCGAGTTGCTGCTCCAGCTCCTGCAAATGAAG
GCTTTACCATTGATTTATTTGACAATTCATCATGTGATCCTTCATCCGTCTTTCGACCATCATCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATT
AATTTGCCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTTTGGAACGTGATAAAAATGAGTCTACAAATCCTTCCAATCA
GTCTTCGGTAAACAGGGAAAAGGAGTTTACAAATGACGATGAGTACATAAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGCGAGCAGGTGTTTG
ATTTGGTGAATCAGGAAGCATTCAATCCATCTGTTGGTATCAACGTGACTGGCATACGAGAAAATTACTTACAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCT
CTAGTGCCATCTGGTCAAAGTTCCCAAACTGTTGAAGGTGCAAATTCCGAGATTCTGGAAAATGCAAGTTTGCCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAG
AAGTGATCCACTTGAAAAGAAATTGCGGAATCCTAATCATATAACTTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCA
TTTCATCATTAAGCAGGCAATCTGGTCAAGTTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCGCTGGCTCACAGAATGTTCGCAAACAATGTTCTCATG
GAGCTTGAAAATGTGGTCTGGAAAGTCCCATTTCTTCAATTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCTTGGACGTTTTTTATGGAAGTTCCTTGGTCCAT
ACTTCATCCTAATAGCATCAAGGCTCGTACATCAGACGGTTATCAAATGAATAATGTAACCAAAACACAGTTTCTAACTAAAGTTGTTGTAAATGATGATTGCATTACCA
TTGAAGGAGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATTTATTCAACGAACAGATACAGCTGTGACTTGGCCGATCTTCCTGTTATAATT
CTGTTGCAGGTTGCGAGCCAGATTATTCTTTGGCTTCACGAGGAGGCTCTAATCTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAGCTTGAACAAGG
TGAAACACTCCGGCTGGTAGCCCACGTGGACCCAGAAGATCCTCAAGGATGTCTTTCATGGTGGTTGGTAATGGACGACGGATTGATGGAAGACAGGAAACTTAACTTTG
AGACTTCAGATGTTGTACCTGAATACAGGAAGTTTTTGGGGCATTTATCTCTAGAAGTTTTGCATTCAACATTAATGGATTTGGTTAGTTTATGCAGTGGAGTTGGTGGT
AGCCTATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTR
PKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAI
NLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQGTSVFIS
LVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLM
ELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVII
LLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG
SL

Cucsat.G8458 (gene) of Cucumber (B10) v3 genome