; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G8490 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8490
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionkeratin, type II cytoskeletal 2 epidermal isoform X1
Genome locationctg1557:3111053..3113731
RNA-Seq ExpressionCucsat.G8490
SyntenyCucsat.G8490
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141514.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]6.85e-96100Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

XP_016902400.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo]4.62e-9497.92Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRN+DGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GDVLRG QSIFPHQDDIGALVDDLVLNTKRLIRATS+EIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

XP_022932819.1 keratin, type II cytoskeletal 2 epidermal isoform X1 [Cucurbita moschata]1.76e-8286.11Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R++ GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GD+L GRQSIFPH+D+IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

XP_022974025.1 keratin, type II cytoskeletal 3 isoform X1 [Cucurbita maxima]7.16e-8285.42Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R + GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GD+L GRQSIFPH+D+IGA+VD+L LNTK+LI+ T+KEIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

XP_038889093.1 ctenidin-1 isoform X1 [Benincasa hispida]2.62e-8490.28Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRN NGNR+Q GEDE GLLWNLPVLKSSRFG LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GD+L G QSIFP +DDI ALVD+LVLN+KRLIRATS+EIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

TrEMBL top hitse value%identityAlignment
A0A0A0KSM8 Uncharacterized protein3.32e-96100Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

A0A1S4E347 glycine-rich cell wall structural protein 12.24e-9497.92Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRN+DGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GDVLRG QSIFPHQDDIGALVDDLVLNTKRLIRATS+EIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

A0A6J1EY31 keratin, type II cytoskeletal 2 epidermal isoform X18.52e-8386.11Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R++ GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GD+L GRQSIFPH+D+IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

A0A6J1F360 keratin, type II cytoskeletal 2 epidermal isoform X22.26e-8086.11Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R++ GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GD+L GRQSIFP QD+IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

A0A6J1ICW2 keratin, type II cytoskeletal 3 isoform X13.47e-8285.42Show/hide
Query:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R + GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR
        GD+L GRQSIFPH+D+IGA+VD+L LNTK+LI+ T+KEIDKWKR
Subjt:  GDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27695.1 glycine-rich protein9.4e-0555.17Show/hide
Query:  SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG
        S F  +G  FG GVGC  GFG+G     GFG G+P   LG G G GCGVGLG G+G G
Subjt:  SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG

AT1G27695.2 glycine-rich protein9.4e-0555.17Show/hide
Query:  SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG
        S F  +G  FG GVGC  GFG+G     GFG G+P   LG G G GCGVGLG G+G G
Subjt:  SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG

AT1G66820.1 glycine-rich protein1.2e-0751.43Show/hide
Query:  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGVGRGIAQDD-KRRY
        +GP  G G+GCG G GIGL GG G G    GL      LGFG+G G G G G+G+GVG G + DD K R+
Subjt:  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGVGRGIAQDD-KRRY

AT4G10330.1 glycine-rich protein6.9e-4057.04Show/hide
Query:  NRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGR
        NR + G+D++GLLW LP ++    G +GPAFGLGVGCG GFG GL+GG GFGPG+PGLQ G G GAGCG+G+GFGYGVGRG A D  R Y NVG      
Subjt:  NRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGR

Query:  QSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKW
            P  +++ +L+D+LV++TK+L++AT+ EIDKW
Subjt:  QSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTAAACAAAATTATGTATATAACTATTTTATATTGTTATATTGAATTAATTTGTTTATATCATATTCTTTATTCGTTCGGAGGAGGAGGAAGAGGAACAAAGAAATC
AGAAATGCCACGAAATATGAACGGAAACAGAAACCAAGACGGAGAAGATGAGAGGGGATTATTGTGGAATCTTCCCGTTCTTAAATCTTCCAGATTCGGAAATTTAGGCC
CCGCCTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAGCTTGGCTTTGGTCTTGGT
GCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGTATTGCCCAAGATGACAAACGCAGATACTCAAACGTTGGGGATGTATTGCGTGGTCGTCAAAG
TATTTTTCCTCATCAGGACGATATCGGCGCGCTTGTTGACGACCTTGTCCTAAATACAAAGAGACTTATCCGAGCTACTTCAAAGGAGATTGACAAGTGGAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
TTTTTAAACAAAATTATGTATATAACTATTTTATATTGTTATATTGAATTAATTTGTTTATATCATATTCTTTATTCGTTCGGAGGAGGAGGAAGAGGAACAAAGAAATC
AGAAATGCCACGAAATATGAACGGAAACAGAAACCAAGACGGAGAAGATGAGAGGGGATTATTGTGGAATCTTCCCGTTCTTAAATCTTCCAGATTCGGAAATTTAGGCC
CCGCCTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAGCTTGGCTTTGGTCTTGGT
GCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGTATTGCCCAAGATGACAAACGCAGATACTCAAACGTTGGGGATGTATTGCGTGGTCGTCAAAG
TATTTTTCCTCATCAGGACGATATCGGCGCGCTTGTTGACGACCTTGTCCTAAATACAAAGAGACTTATCCGAGCTACTTCAAAGGAGATTGACAAGTGGAAAAGATGA
Protein sequenceShow/hide protein sequence
FLNKIMYITILYCYIELICLYHILYSFGGGGRGTKKSEMPRNMNGNRNQDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLG
AGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGRQSIFPHQDDIGALVDDLVLNTKRLIRATSKEIDKWKR