; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G855 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G855
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionDNA-directed RNA polymerase III subunit rpc6-like
Genome locationctg1:3062324..3064782
RNA-Seq ExpressionCucsat.G855
SyntenyCucsat.G855
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007832 - RNA polymerase Rpc34
IPR016049 - RNA polymerase Rpc34-like
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13079.1 DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa]6.30e-16794.76Show/hide
Query:  VLDHAMRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFE
        V  + M KS+GPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFE
Subjt:  VLDHAMRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFE

Query:  PAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCT
        PAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+
Subjt:  PAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCT

Query:  QGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        QGG LKGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  QGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

TYK19400.1 DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo var. makuwa]6.44e-17598.77Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

XP_004148278.1 DNA-directed RNA polymerase III subunit RPC6 [Cucumis sativus]2.87e-177100Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

XP_008439941.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo]2.73e-16896.3Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KS+GPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+QGG L
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

XP_008448982.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo]5.56e-17598.77Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

TrEMBL top hitse value%identityAlignment
A0A0A0L5W6 Uncharacterized protein1.39e-177100Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

A0A1S3AZZ6 DNA-directed RNA polymerase III subunit RPC6-like1.32e-16896.3Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KS+GPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+QGG L
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

A0A1S3BL06 DNA-directed RNA polymerase III subunit rpc6-like2.69e-17598.77Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

A0A5D3CS47 DNA-directed RNA polymerase III subunit RPC6-like3.05e-16794.76Show/hide
Query:  VLDHAMRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFE
        V  + M KS+GPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFE
Subjt:  VLDHAMRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFE

Query:  PAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCT
        PAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+
Subjt:  PAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCT

Query:  QGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        QGG LKGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  QGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

A0A5D3D7H7 DNA-directed RNA polymerase III subunit rpc6-like3.12e-17598.77Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

SwissProt top hitse value%identityAlignment
Q2T9S3 DNA-directed RNA polymerase III subunit RPC64.8e-2331.03Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS
        K     E           SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+  +        P TG +  
Subjt:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS

Query:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF

Q86JM3 DNA-directed RNA polymerase III subunit rpc69.1e-2227.46Show/hide
Query:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        ++ S+  +S K   P+   K    G    ++ ++Y LI +  + G  T ++K  + + +  +TK LK+L+++ LIK V+  Q+  KK Y+  + EP++E+
Subjt:  MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGG
        TGG  Y D   D  YI  +K      +  K  + +  I+   ++    A    L  E I+ +VN ++ D  + E++ +  G       G I YK      
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGG

Query:  GLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLD
          K         ++PCG CP    C+ NG++SP  CVY+ ++L+
Subjt:  GLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLD

Q921X6 DNA-directed RNA polymerase III subunit RPC63.7e-2331.03Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEG----IVE---SFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS
        K     E     +++   SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+           P TG + +
Subjt:  KKLMTIEG----IVE---SFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS

Query:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF

Q9H1D9 DNA-directed RNA polymerase III subunit RPC68.2e-2331.03Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS
        K     E           SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+           P TG +  
Subjt:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS

Query:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF

Q9VD25 Probable DNA-directed RNA polymerase III subunit RPC62.2e-2027.39Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        +EKV+Y ++    + GI   D++ ++      + K LK+L+TK LIK V+      KK Y+  + EP   +TGG WY+D + + ++++ L Q C R +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KK-----------------LMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMASI
        K+                   T+  + +     G  KV L+   +E I+  +V D     V+    G F +  +                 P TG +  +
Subjt:  KK-----------------LMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMASI

Query:  PCGVCPRITYCTPNGIISPATCVYYTKWLD
        PCG+CP I  C+  G ++  TC Y   WLD
Subjt:  PCGVCPRITYCTPNGIISPATCVYYTKWLD

Arabidopsis top hitse value%identityAlignment
AT5G23710.1 DNA binding;DNA-directed RNA polymerases1.7e-5246.81Show/hide
Query:  KRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE
        KRKRPD   K+S G      EK L DLI   Q  G   F++KRE     ++VT+ + SL+ K LIK V +  NKG K YL+ +FEP  ELTGG WY DG 
Subjt:  KRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE

Query:  LDKDYINTLKQVCARMIQ--RKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGA
        LD   I  LK  C  +++  R++++T+E +   F +    + +LS +Q +EI+  L+LDN +MEVKS+G  EF    IG++CY+   +  G  GEP+ GA
Subjt:  LDKDYINTLKQVCARMIQ--RKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGA

Query:  MASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
         ASIPCGVCP I  C+P+G+ISP TCVY+ KWLDF
Subjt:  MASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTAACAAGTATCTAACCACACTGAAAGATGATTTATCCCAAGTACTTGATCATGCAATGAGGAAATCAGAAGGGCCATCATCACTCAAGAGAAAAAGGCCAGATTTGGG
TACGAAAAATTCGTCTGGAGGAGCTCTAATTGGGCAAGAAAAAGTTCTCTATGACCTAATTTGCAGCAAGCAAAGCATGGGGATTTGCACTTTTGACATGAAAAGAGAGA
CAAAGTTTGCTGAAAGTGTAGTAACAAAATCCCTCAAGTCTCTTCAAACCAAAGGCCTGATAAAGATAGTCCAACACTATCAAAACAAAGGCAAGAAGTTCTACCTATCA
AATGACTTCGAACCAGCTAAGGAATTAACCGGTGGTAACTGGTATCGTGACGGGGAGCTCGACAAAGACTACATCAATACTCTCAAACAAGTTTGTGCAAGAATGATACA
AAGGAAGAAGTTGATGACCATTGAAGGAATTGTGGAGTCTTTCAAACAGAGTGGTGCTTTCAAAGTAGAGTTGTCAAGAGAGCAAATTGAGGAGATTGTAAATGCTTTGG
TGTTGGACAATCAGGTGATGGAAGTGAAGAGCTCTGGATTTGGTGAATTTGAATTTATTCCAATTGGGAAGATTTGTTATAAGTATTGTACTCAAGGAGGAGGCCTCAAA
GGGGAGCCTAAAACAGGGGCAATGGCTTCCATTCCTTGTGGAGTTTGTCCAAGGATCACTTATTGTACCCCAAATGGCATCATTTCTCCTGCTACCTGTGTCTATTATAC
CAAGTGGTTAGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
TTTAACAAGTATCTAACCACACTGAAAGATGATTTATCCCAAGTACTTGATCATGCAATGAGGAAATCAGAAGGGCCATCATCACTCAAGAGAAAAAGGCCAGATTTGGG
TACGAAAAATTCGTCTGGAGGAGCTCTAATTGGGCAAGAAAAAGTTCTCTATGACCTAATTTGCAGCAAGCAAAGCATGGGGATTTGCACTTTTGACATGAAAAGAGAGA
CAAAGTTTGCTGAAAGTGTAGTAACAAAATCCCTCAAGTCTCTTCAAACCAAAGGCCTGATAAAGATAGTCCAACACTATCAAAACAAAGGCAAGAAGTTCTACCTATCA
AATGACTTCGAACCAGCTAAGGAATTAACCGGTGGTAACTGGTATCGTGACGGGGAGCTCGACAAAGACTACATCAATACTCTCAAACAAGTTTGTGCAAGAATGATACA
AAGGAAGAAGTTGATGACCATTGAAGGAATTGTGGAGTCTTTCAAACAGAGTGGTGCTTTCAAAGTAGAGTTGTCAAGAGAGCAAATTGAGGAGATTGTAAATGCTTTGG
TGTTGGACAATCAGGTGATGGAAGTGAAGAGCTCTGGATTTGGTGAATTTGAATTTATTCCAATTGGGAAGATTTGTTATAAGTATTGTACTCAAGGAGGAGGCCTCAAA
GGGGAGCCTAAAACAGGGGCAATGGCTTCCATTCCTTGTGGAGTTTGTCCAAGGATCACTTATTGTACCCCAAATGGCATCATTTCTCCTGCTACCTGTGTCTATTATAC
CAAGTGGTTAGATTTTTAA
Protein sequenceShow/hide protein sequence
FNKYLTTLKDDLSQVLDHAMRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLS
NDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLK
GEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF