; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G867 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G867
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRNA-binding protein pno1
Genome locationctg1:3214568..3216009
RNA-Seq ExpressionCucsat.G867
SyntenyCucsat.G867
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650098.1 hypothetical protein Csa_010636 [Cucumis sativus]1.03e-150100Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_004148267.2 RNA-binding protein pno1 [Cucumis sativus]7.64e-154100Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008449001.1 PREDICTED: RNA-binding protein pno1 [Cucumis melo]8.56e-15197.77Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQS EASTSM+VETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWM+IYTPIYDQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022932417.1 RNA-binding protein pno1 [Cucurbita moschata]2.35e-14895.54Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQS EASTSM+VET+ST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_038904158.1 RNA-binding protein pno1 [Benincasa hispida]4.07e-14997.32Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQS EASTSM+VETISTQTK+VVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPI+DQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVH FMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0L7D9 KH domain-containing protein3.70e-154100Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3BLP2 RNA-binding protein pno14.14e-15197.77Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQS EASTSM+VETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWM+IYTPIYDQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1EWL7 RNA-binding protein pno11.14e-14895.54Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQS EASTSM+VET+ST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1HQ98 RNA-binding protein pno1-like2.68e-14794.64Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQ  EASTSM+VET+ST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAF+LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1KXN9 RNA-binding protein pno1-like isoform X15.41e-14795.54Show/hide
Query:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQS EASTSM+VE +STQ K VVSTLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno15.7e-6560.2Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVD
        +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM I+TP+ + +K+ IR NL +R VE++   +T DI  +QK+ADFV AF+LGF+V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q29IG6 RNA-binding protein pno14.4e-6566.85Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q5F414 RNA-binding protein PNO11.1e-6360.2Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVD
        +P F PL    +  G+ + RKV VP +RY+PLK+ WM I+TPI + +++ IR NLK R VE+KT ++T D+S L K+ADFV AF+LGF V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q6VEU3 RNA-binding protein PNO11.3e-6458.29Show/hide
Query:  ISTQTKDVVSTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFM
        + TQT++  S+ P K P F  L   ++  G  + RKV VP HRY+PLK+ W+ I+TPI + +++ +R NLK R+VE+KT  +T DI  L ++ADFV AF+
Subjt:  ISTQTKDVVSTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFM

Query:  LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKL
        LGF V DA+AL+R+DEL++E+F++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  L
Subjt:  LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKL

Query:  RAVTARLAERF
        RAV  R AERF
Subjt:  RAVTARLAERF

Q9VR89 RNA-binding protein pno13.9e-6665.24Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein3.4e-9782.41Show/hide
Query:  STSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSA
        ST M+VET +  T      LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW+DIYTPIYDQMK+DIRMNLKARKVELKTRADTPDISNLQKSA
Subjt:  STSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSA

Query:  DFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA
        DFVHAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPA
Subjt:  DFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA

Query:  GKVYSKLRAVTARLAE
        GKVYSKLR+V+ARL E
Subjt:  GKVYSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAACGAAGCTTCCACTTCCATGGATGTGGAAACAATTTCAACTCAAACAAAAGATGTAGTTAGCACATTGCCTCCAAAACCACAGTTTGATCCTCTAAAGCC
TCATGAAATGAATGATGGTCGAGTTCAATTCCGAAAGGTCTCTGTTCCACCCCATCGTTATTCCCCTCTAAAGAAAGCATGGATGGATATTTACACCCCAATTTACGACC
AGATGAAAATCGACATCCGAATGAATCTCAAGGCACGGAAAGTCGAGTTGAAAACCAGAGCAGACACACCCGACATTAGTAACTTGCAGAAGTCTGCAGATTTTGTTCAT
GCTTTCATGCTTGGTTTCGATGTTATTGATGCCATTGCACTCTTACGTGTTGATGAACTCTATGTGGAGTCTTTCGAGATTAAAGATGTTAAAACGTTGCGAGGCGAGCA
CTTATCCCGAGCCATTGGTAGACTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAATGCCACCAAGACGAGGATAGTCATTGCAGATACTAAGATTCACATAT
TAGGATCCTTTGCAAATATCAAGATTGCTAGGGATTCTCTTTGCAGTCTCATTTTAGGGTCACCTGCTGGAAAAGTTTATTCAAAGCTAAGGGCAGTTACAGCCAGATTG
GCAGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAACGAAGCTTCCACTTCCATGGATGTGGAAACAATTTCAACTCAAACAAAAGATGTAGTTAGCACATTGCCTCCAAAACCACAGTTTGATCCTCTAAAGCC
TCATGAAATGAATGATGGTCGAGTTCAATTCCGAAAGGTCTCTGTTCCACCCCATCGTTATTCCCCTCTAAAGAAAGCATGGATGGATATTTACACCCCAATTTACGACC
AGATGAAAATCGACATCCGAATGAATCTCAAGGCACGGAAAGTCGAGTTGAAAACCAGAGCAGACACACCCGACATTAGTAACTTGCAGAAGTCTGCAGATTTTGTTCAT
GCTTTCATGCTTGGTTTCGATGTTATTGATGCCATTGCACTCTTACGTGTTGATGAACTCTATGTGGAGTCTTTCGAGATTAAAGATGTTAAAACGTTGCGAGGCGAGCA
CTTATCCCGAGCCATTGGTAGACTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAATGCCACCAAGACGAGGATAGTCATTGCAGATACTAAGATTCACATAT
TAGGATCCTTTGCAAATATCAAGATTGCTAGGGATTCTCTTTGCAGTCTCATTTTAGGGTCACCTGCTGGAAAAGTTTATTCAAAGCTAAGGGCAGTTACAGCCAGATTG
GCAGAAAGGTTTTGA
Protein sequenceShow/hide protein sequence
MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVH
AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL
AERF