; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G8714 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8714
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionphotosystem I reaction center subunit IV, chloroplastic-like
Genome locationctg1558:960731..962260
RNA-Seq ExpressionCucsat.G8714
SyntenyCucsat.G8714
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003375 - Photosystem I PsaE, reaction centre subunit IV
IPR008990 - Electron transport accessory-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061399.1 photosystem I reaction center subunit IV [Cucumis melo var. makuwa]8.24e-7294.7Show/hide
Query:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
        VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA  SDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
Subjt:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP

Query:  NTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        NTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  NTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

KAE8651724.1 hypothetical protein Csa_006032 [Cucumis sativus]1.79e-156100Show/hide
Query:  MSLSLRYGYVIYMATFNWFKPNIQFFHRLRKFHQQLLPIKHLILSPSTCGYHYFIGFISSSSKTINIFFIHQLFEGIEKKDHSKHKRAMAMAASNLSCIA
        MSLSLRYGYVIYMATFNWFKPNIQFFHRLRKFHQQLLPIKHLILSPSTCGYHYFIGFISSSSKTINIFFIHQLFEGIEKKDHSKHKRAMAMAASNLSCIA
Subjt:  MSLSLRYGYVIYMATFNWFKPNIQFFHRLRKFHQQLLPIKHLILSPSTCGYHYFIGFISSSSKTINIFFIHQLFEGIEKKDHSKHKRAMAMAASNLSCIA

Query:  SGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
        SGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
Subjt:  SGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP

Query:  NTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        NTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
Subjt:  NTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

XP_004152807.2 photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus]8.00e-87100Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

XP_008441802.1 PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo]2.57e-8195.21Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA  SDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

XP_038889433.1 photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]3.23e-7994.44Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA  SDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        DVGSVVTVDQDPNTRYPVVVRF+KVNYASVSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ1 Uncharacterized protein1.59e-147100Show/hide
Query:  MATFNWFKPNIQFFHRLRKFHQQLLPIKHLILSPSTCGYHYFIGFISSSSKTINIFFIHQLFEGIEKKDHSKHKRAMAMAASNLSCIASGVVIPSSTTIS
        MATFNWFKPNIQFFHRLRKFHQQLLPIKHLILSPSTCGYHYFIGFISSSSKTINIFFIHQLFEGIEKKDHSKHKRAMAMAASNLSCIASGVVIPSSTTIS
Subjt:  MATFNWFKPNIQFFHRLRKFHQQLLPIKHLILSPSTCGYHYFIGFISSSSKTINIFFIHQLFEGIEKKDHSKHKRAMAMAASNLSCIASGVVIPSSTTIS

Query:  SSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNK
        SSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNK
Subjt:  SSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNK

Query:  VNYASVSTNNYALDEIQEVA
        VNYASVSTNNYALDEIQEVA
Subjt:  VNYASVSTNNYALDEIQEVA

A0A1S3B3T3 photosystem I reaction center subunit IV, chloroplastic-like1.24e-8195.21Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA  SDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

A0A5A7V6V9 Photosystem I reaction center subunit IV3.99e-7294.7Show/hide
Query:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
        VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA  SDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
Subjt:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP

Query:  NTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        NTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  NTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

A0A6J1FC09 photosystem I reaction center subunit IV, chloroplastic-like7.65e-6884.72Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAS--DEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPSSTTISSSS R SS+AFFPKNS SISRS RLV+RA+  + AAPPPAA A   A  E PKPKPAPIGPKRG KVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAS--DEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

A0A6J1HLT8 photosystem I reaction center subunit IV, chloroplastic-like8.84e-6784.03Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAS--DEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPSS TISSSS R SS+AFFPKNS SISRS RLV+RA+  + AAPPPAA A   A  E PKPKPAPIGPKRG KVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAS--DEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

SwissProt top hitse value%identityAlignment
P12354 Photosystem I reaction center subunit IV, chloroplastic4.6e-3367.48Show/hide
Query:  SSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPK--PKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVR
        SS + RL      P  + S  RS+RLV+RA++EAA  PAA +P     E PK   KP PIGPKRG+KV+I+RKESYWYK VGSVV VDQDP TRYPVVVR
Subjt:  SSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPK--PKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVR

Query:  FNKVNYASVSTNNYALDEIQEVA
        FNKVNYA+VSTNNYALDEIQEVA
Subjt:  FNKVNYASVSTNNYALDEIQEVA

P13194 Photosystem I reaction center subunit IV, chloroplastic4.0e-2953.33Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTA--------ATTEEPKPKPAPIGPKRGAKVKILRK
        MA++N++   S  ++ +     ++    S ++F P N   +    +LV RA +  A  PA  AP A        AT E  K KP P GPKRG KVKILR+
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTA--------ATTEEPKPKPAPIGPKRGAKVKILRK

Query:  ESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
        ESYWY   GSVVTVDQDPNTRYPVVVRF KVNYA VSTNNYALDEI+EVA
Subjt:  ESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

Q41228 Photosystem I reaction center subunit IV A, chloroplastic3.5e-3357.45Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDV
        MA+ N++  AS  ++ +    S++++  +++ FF  + N  S + RLV+RA++EAAPP AA     A       KP PIGPKRG KV+ILRKESYWYK  
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDV

Query:  GSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEV
        GSVV  DQDPNTRYPVVVRFNKVNYA+VSTNNYALDEI+EV
Subjt:  GSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEV

Q41229 Photosystem I reaction center subunit IV B, chloroplastic3.2e-3456.34Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKD
        MA+S+++  ASG ++ +    +S+++  +S+ FF  + N+ + +  RLV+RA++EAAPP A              KP PIGPKRG KV++LRKESYWYK 
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEV
        VGSVV VDQDPNTRYPVVVRFNKVNYA+VSTNNYALDE++EV
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEV

Q9S831 Photosystem I reaction center subunit IV A, chloroplastic3.0e-3259.42Show/hide
Query:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAP--------PPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV
        V+P++ T+++ +SS  SS++F P      +  SRLV+RA+++ AP        P AA AP  AT    KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV
Subjt:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAP--------PPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE++EVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA

Arabidopsis top hitse value%identityAlignment
AT2G20260.1 photosystem I subunit E-24.1e-2951.7Show/hide
Query:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKP--------KPAPIGPKRGAKVKILRKES
        ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RA+++  PP  A++ +++TT    P        KP PIGPKRG+KVKILRKES
Subjt:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKP--------KPAPIGPKRGAKVKILRKES

Query:  YWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEV
        YWYK+VGSVV VDQDP TRYPVVVRF KVNYA++STNNYALDE++EV
Subjt:  YWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEV

AT4G28750.1 Photosystem I reaction centre subunit IV / PsaE protein2.1e-3359.42Show/hide
Query:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAP--------PPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV
        V+P++ T+++ +SS  SS++F P      +  SRLV+RA+++ AP        P AA AP  AT    KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV
Subjt:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAP--------PPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE++EVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIQEVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTATCCTTAAGATATGGATATGTTATCTACATGGCAACATTCAATTGGTTTAAACCCAACATTCAATTTTTCCATAGGCTGAGAAAATTCCACCAACAATTATT
ACCCATAAAACATCTGATTCTTTCTCCTTCAACATGTGGTTATCATTATTTCATTGGGTTTATCTCTTCATCTTCCAAAACCATTAACATATTCTTCATTCATCAGTTAT
TTGAGGGCATAGAGAAAAAAGATCATTCAAAACACAAAAGGGCAATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCCTCAACCACC
ATTTCATCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCCCAAGAACTCCAACTCTATTTCTAGATCTTCTCGATTGGTTATCCGTGCCTCCGACGAGGCTGCTCC
CCCACCCGCTGCTACTGCACCCACTGCCGCCACCACCGAAGAGCCCAAGCCTAAGCCTGCCCCTATTGGTCCCAAGAGAGGTGCCAAGGTGAAGATCTTAAGGAAAGAAT
CTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGATCCCAACACTCGATACCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACA
AACAACTATGCACTTGATGAGATTCAAGAAGTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTATCCTTAAGATATGGATATGTTATCTACATGGCAACATTCAATTGGTTTAAACCCAACATTCAATTTTTCCATAGGCTGAGAAAATTCCACCAACAATTATT
ACCCATAAAACATCTGATTCTTTCTCCTTCAACATGTGGTTATCATTATTTCATTGGGTTTATCTCTTCATCTTCCAAAACCATTAACATATTCTTCATTCATCAGTTAT
TTGAGGGCATAGAGAAAAAAGATCATTCAAAACACAAAAGGGCAATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCCTCAACCACC
ATTTCATCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCCCAAGAACTCCAACTCTATTTCTAGATCTTCTCGATTGGTTATCCGTGCCTCCGACGAGGCTGCTCC
CCCACCCGCTGCTACTGCACCCACTGCCGCCACCACCGAAGAGCCCAAGCCTAAGCCTGCCCCTATTGGTCCCAAGAGAGGTGCCAAGGTGAAGATCTTAAGGAAAGAAT
CTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGATCCCAACACTCGATACCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACA
AACAACTATGCACTTGATGAGATTCAAGAAGTTGCTTAA
Protein sequenceShow/hide protein sequence
MSLSLRYGYVIYMATFNWFKPNIQFFHRLRKFHQQLLPIKHLILSPSTCGYHYFIGFISSSSKTINIFFIHQLFEGIEKKDHSKHKRAMAMAASNLSCIASGVVIPSSTT
ISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST
NNYALDEIQEVA