; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G8748 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8748
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Genome locationctg1558:2124571..2125792
RNA-Seq ExpressionCucsat.G8748
SyntenyCucsat.G8748
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61216.1 hypothetical protein Csa_006224 [Cucumis sativus]9.12e-16898.78Show/hide
Query:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
        N GF  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
Subjt:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ

Query:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
        VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
Subjt:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII

Query:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Subjt:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

XP_004152852.1 pentatricopeptide repeat-containing protein At4g30700 [Cucumis sativus]1.03e-16798.78Show/hide
Query:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
        N GF  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
Subjt:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ

Query:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
        VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
Subjt:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII

Query:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Subjt:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

XP_016902152.1 PREDICTED: pentatricopeptide repeat-containing protein At4g30700 [Cucumis melo]1.06e-16498.75Show/hide
Query:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
        QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE+ANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
Subjt:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK

Query:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC
        LAKTPGCTLIEI DQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST+PGTEIRIIKNLRVC
Subjt:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC

Query:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Subjt:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

XP_038889951.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida]2.18e-16295.93Show/hide
Query:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
        N GF  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE+A+VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
Subjt:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ

Query:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
        VVKKRKLAKTPGCTLIEI +QQYVFTSGD+SHPQATAIF MLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST+PGTEIRII
Subjt:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII

Query:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Subjt:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

XP_038889958.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X2 [Benincasa hispida]1.94e-16295.93Show/hide
Query:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
        N GF  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE+A+VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
Subjt:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ

Query:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
        VVKKRKLAKTPGCTLIEI +QQYVFTSGD+SHPQATAIF MLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST+PGTEIRII
Subjt:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII

Query:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Subjt:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

TrEMBL top hitse value%identityAlignment
A0A0A0LMK7 DYW_deaminase domain-containing protein4.42e-16898.78Show/hide
Query:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
        N GF  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
Subjt:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ

Query:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
        VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
Subjt:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII

Query:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Subjt:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

A0A1S4E1Q1 pentatricopeptide repeat-containing protein At4g307005.15e-16598.75Show/hide
Query:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
        QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE+ANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
Subjt:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK

Query:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC
        LAKTPGCTLIEI DQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST+PGTEIRIIKNLRVC
Subjt:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC

Query:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Subjt:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

A0A5A7U078 Pentatricopeptide repeat-containing protein5.15e-16598.75Show/hide
Query:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
        QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE+ANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
Subjt:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK

Query:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC
        LAKTPGCTLIEI DQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST+PGTEIRIIKNLRVC
Subjt:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC

Query:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Subjt:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

A0A6J1EDA0 pentatricopeptide repeat-containing protein At4g307003.10e-15892.68Show/hide
Query:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
        N GF  QPMSEHYACMVDI GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT++A+VAS+RLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
Subjt:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ

Query:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
        VVKKR LAKTPGCTLIEIDDQQ+VFTSGDRSHP+A AI+ MLEKL GKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST+PGTEIRII
Subjt:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII

Query:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK+G+CSCGDYW
Subjt:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

A0A6J1IEL0 pentatricopeptide repeat-containing protein At4g307003.10e-15892.68Show/hide
Query:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
        N GF  QPMSEHYACMVDI GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT++A+VAS+RLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ
Subjt:  NLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ

Query:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII
        VVKKR LAKTPGCTLIEIDDQQ+VFTSGD+SHP+ATAI+ MLEKL GKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST+PGTEIRII
Subjt:  VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII

Query:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK+G CSCGDYW
Subjt:  KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

SwissProt top hitse value%identityAlignment
O81767 Pentatricopeptide repeat-containing protein At4g339904.5e-7151.88Show/hide
Query:  PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL
        P  +HY CMVD+ GRAGQL  AL+FI+ M L+P  ++WGALL AC +H N ++  +AS+ LF+++PE+VGY+VLLSN+Y++   +     +R +   + L
Subjt:  PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL

Query:  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL
         KTPG + +E+D++  VF +G+++HP    ++  L  L  K++  GY  +     L DVED+EKE ++  HSE+LAIAF LI+T   T IRI KNLRVC 
Subjt:  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL

Query:  DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        DCH+ TKFISKITER I+VRD+NRFHHFKNG+CSCGDYW
Subjt:  DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

Q56XI1 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial1.3e-7049.18Show/hide
Query:  FHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVK
        F  +P++ HYACMVD+LGRAG+   A+E I+ M +EP  AVWG+LLGAC  H   ++A   +K+L +++PEN G Y+LLSN+Y++   +   A +R+++K
Subjt:  FHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVK

Query:  KRKLAKTPGCTLIEIDDQQYVFTSGD-RSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKN
         R + K+PGC+  E++++ + FT G   SHP+  +I ++L++L G +REAGY  +  + ALHDV++EEK   +  HSE+LA+A+ L+    G  IR++KN
Subjt:  KRKLAKTPGCTLIEIDDQQYVFTSGD-RSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKN

Query:  LRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        LRVC DCHTA K ISK+ ER I++RDANRFHHF+NG CSC DYW
Subjt:  LRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

Q9LW32 Pentatricopeptide repeat-containing protein At3g26782, mitochondrial1.3e-7352.26Show/hide
Query:  FHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVK
        F  +P  EHY CMVD+LGRAG L  A + I+RM ++P   +W +LL AC IHKN E+A ++  RLF+LD  N GYY+LLS+IY+    +     VR ++K
Subjt:  FHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVK

Query:  KRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNL
         R L K PG +L+E++ + +VF  GD  HPQ   I+E L +L  K+ EAGY + T ++  HDV++EEKE+ + VHSEKLAIAFG+++T PG+ + ++KNL
Subjt:  KRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNL

Query:  RVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        RVC DCH   K ISKI +R  VVRDA RFHHFK+G CSCGDYW
Subjt:  RVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

Q9SUH6 Pentatricopeptide repeat-containing protein At4g307004.5e-10374.17Show/hide
Query:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
        +P  +HYACMVDILGRAG L  AL+FIE M +EPG +VW  LLGAC IHK+T +A   S++LF+LDP+NVGY+VLLSNI+S DRN+P+AA+VRQ  KKRK
Subjt:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK

Query:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC
        LAK PG TLIEI +  +VFTSGD+SHPQ   I+E LEKL GKMREAGYQ ET   ALHDVE+EE+ELMV VHSE+LAIAFGLI+T+PGTEIRIIKNLRVC
Subjt:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC

Query:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        LDCHT TK ISKITERVIVVRDANRFHHFK+G+CSCGDYW
Subjt:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

Q9SY02 Pentatricopeptide repeat-containing protein At4g027504.5e-7150.63Show/hide
Query:  PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL
        P S+HYACMVD+LGRAG L +A   ++ MP EP  A+WG LLGA  +H NTE+A  A+ ++F ++PEN G YVLLSN+Y++   +     +R  ++ + +
Subjt:  PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL

Query:  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL
         K PG + IEI ++ + F+ GD  HP+   IF  LE+L  +M++AGY ++T +  LHDVE+EEKE MV  HSE+LA+A+G++    G  IR+IKNLRVC 
Subjt:  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL

Query:  DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        DCH A K++++IT R+I++RD NRFHHFK+G CSCGDYW
Subjt:  DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

Arabidopsis top hitse value%identityAlignment
AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein9.4e-7249.18Show/hide
Query:  FHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVK
        F  +P++ HYACMVD+LGRAG+   A+E I+ M +EP  AVWG+LLGAC  H   ++A   +K+L +++PEN G Y+LLSN+Y++   +   A +R+++K
Subjt:  FHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVK

Query:  KRKLAKTPGCTLIEIDDQQYVFTSGD-RSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKN
         R + K+PGC+  E++++ + FT G   SHP+  +I ++L++L G +REAGY  +  + ALHDV++EEK   +  HSE+LA+A+ L+    G  IR++KN
Subjt:  KRKLAKTPGCTLIEIDDQQYVFTSGD-RSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKN

Query:  LRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        LRVC DCHTA K ISK+ ER I++RDANRFHHF+NG CSC DYW
Subjt:  LRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.1e-7552.26Show/hide
Query:  FHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVK
        F  +P  EHY CMVD+LGRAG L  A + I+RM ++P   +W +LL AC IHKN E+A ++  RLF+LD  N GYY+LLS+IY+    +     VR ++K
Subjt:  FHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVK

Query:  KRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNL
         R L K PG +L+E++ + +VF  GD  HPQ   I+E L +L  K+ EAGY + T ++  HDV++EEKE+ + VHSEKLAIAFG+++T PG+ + ++KNL
Subjt:  KRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNL

Query:  RVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        RVC DCH   K ISKI +R  VVRDA RFHHFK+G CSCGDYW
Subjt:  RVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.2e-7250.63Show/hide
Query:  PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL
        P S+HYACMVD+LGRAG L +A   ++ MP EP  A+WG LLGA  +H NTE+A  A+ ++F ++PEN G YVLLSN+Y++   +     +R  ++ + +
Subjt:  PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL

Query:  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL
         K PG + IEI ++ + F+ GD  HP+   IF  LE+L  +M++AGY ++T +  LHDVE+EEKE MV  HSE+LA+A+G++    G  IR+IKNLRVC 
Subjt:  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL

Query:  DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        DCH A K++++IT R+I++RD NRFHHFK+G CSCGDYW
Subjt:  DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-10474.17Show/hide
Query:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
        +P  +HYACMVDILGRAG L  AL+FIE M +EPG +VW  LLGAC IHK+T +A   S++LF+LDP+NVGY+VLLSNI+S DRN+P+AA+VRQ  KKRK
Subjt:  QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK

Query:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC
        LAK PG TLIEI +  +VFTSGD+SHPQ   I+E LEKL GKMREAGYQ ET   ALHDVE+EE+ELMV VHSE+LAIAFGLI+T+PGTEIRIIKNLRVC
Subjt:  LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVC

Query:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        LDCHT TK ISKITERVIVVRDANRFHHFK+G+CSCGDYW
Subjt:  LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW

AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.2e-7251.88Show/hide
Query:  PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL
        P  +HY CMVD+ GRAGQL  AL+FI+ M L+P  ++WGALL AC +H N ++  +AS+ LF+++PE+VGY+VLLSN+Y++   +     +R +   + L
Subjt:  PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL

Query:  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL
         KTPG + +E+D++  VF +G+++HP    ++  L  L  K++  GY  +     L DVED+EKE ++  HSE+LAIAF LI+T   T IRI KNLRVC 
Subjt:  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL

Query:  DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
        DCH+ TKFISKITER I+VRD+NRFHHFKNG+CSCGDYW
Subjt:  DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGTTGCAATCTGGGATTCCACCGACAGCCCATGAGTGAGCACTATGCTTGCATGGTTGACATACTTGGGAGAGCTGGACAACTAACAAATGCCTTGGAGTTTAT
TGAAAGAATGCCACTGGAGCCTGGCCCAGCTGTTTGGGGTGCACTGCTTGGTGCTTGCATGATTCACAAGAATACAGAGATGGCCAATGTTGCTTCCAAAAGACTTTTTC
AATTGGACCCAGAAAATGTGGGGTACTATGTTCTACTTTCTAACATATATTCTACTGACAGGAATTTCCCCAAAGCTGCTTCAGTAAGACAAGTTGTTAAGAAGAGAAAA
CTAGCAAAAACGCCTGGTTGCACTCTAATTGAGATTGACGATCAACAATATGTGTTCACATCGGGGGATCGATCCCATCCTCAGGCCACAGCCATTTTTGAGATGCTAGA
GAAGTTAACAGGGAAAATGAGAGAGGCTGGATATCAGGCAGAAACTGTCACTACTGCTTTGCATGATGTAGAGGATGAAGAGAAGGAGTTAATGGTGAATGTCCACAGTG
AAAAATTAGCAATTGCTTTTGGGCTTATTTCAACCAAGCCTGGAACTGAAATTAGGATTATCAAGAACCTCCGAGTTTGTCTAGATTGTCATACTGCAACTAAATTTATA
TCAAAGATCACAGAGAGAGTGATTGTTGTTAGGGATGCTAATAGATTCCATCATTTCAAAAATGGTATTTGTTCATGTGGAGACTACTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATGTTGCAATCTGGGATTCCACCGACAGCCCATGAGTGAGCACTATGCTTGCATGGTTGACATACTTGGGAGAGCTGGACAACTAACAAATGCCTTGGAGTTTAT
TGAAAGAATGCCACTGGAGCCTGGCCCAGCTGTTTGGGGTGCACTGCTTGGTGCTTGCATGATTCACAAGAATACAGAGATGGCCAATGTTGCTTCCAAAAGACTTTTTC
AATTGGACCCAGAAAATGTGGGGTACTATGTTCTACTTTCTAACATATATTCTACTGACAGGAATTTCCCCAAAGCTGCTTCAGTAAGACAAGTTGTTAAGAAGAGAAAA
CTAGCAAAAACGCCTGGTTGCACTCTAATTGAGATTGACGATCAACAATATGTGTTCACATCGGGGGATCGATCCCATCCTCAGGCCACAGCCATTTTTGAGATGCTAGA
GAAGTTAACAGGGAAAATGAGAGAGGCTGGATATCAGGCAGAAACTGTCACTACTGCTTTGCATGATGTAGAGGATGAAGAGAAGGAGTTAATGGTGAATGTCCACAGTG
AAAAATTAGCAATTGCTTTTGGGCTTATTTCAACCAAGCCTGGAACTGAAATTAGGATTATCAAGAACCTCCGAGTTTGTCTAGATTGTCATACTGCAACTAAATTTATA
TCAAAGATCACAGAGAGAGTGATTGTTGTTAGGGATGCTAATAGATTCCATCATTTCAAAAATGGTATTTGTTCATGTGGAGACTACTGGTGA
Protein sequenceShow/hide protein sequence
MRCCNLGFHRQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK
LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFI
SKITERVIVVRDANRFHHFKNGICSCGDYW