; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G8758 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8758
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionribosomal RNA processing protein 1 homolog
Genome locationctg1558:2355755..2358371
RNA-Seq ExpressionCucsat.G8758
SyntenyCucsat.G8758
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domainsIPR010301 - Nucleolar, Nop52


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651686.1 hypothetical protein Csa_006341 [Cucumis sativus]1.53e-272100Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVANDAI
        QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVANDAI
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVANDAI

XP_004150388.1 ribosomal RNA processing protein 1 homolog [Cucumis sativus]8.94e-268100Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN
        QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN

XP_008450828.1 PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo]3.81e-25595.38Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSM KLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN
        QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAKKAKKTTNGISDLVSEN+PANKDNENIVVAN
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN

XP_022149903.1 ribosomal RNA processing protein 1 homolog [Momordica charantia]1.14e-23388.14Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCVWHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFAL+KKHSWDLELCRRL+QVLEERV+F +DKFHGNGVNY IASVFLEELRPFLPL+KEVVDVLFKPFLLSM KLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVL+GKIKSNLFDV+LK GKQLLE RK GDDVDS DD VVYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKK-AKKAKKAKKTTNGISDLVSENTPANKDNENIV
        QDGDEVPTLVP+SS EEAPS+IS+VDVDV  ESTDKALKKQKK+KKATD SGKKK AKKAKKAKKT NGISDLVSENTP NKDNENIV
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKK-AKKAKKAKKTTNGISDLVSENTPANKDNENIV

XP_038875379.1 ribosomal RNA processing protein 1 homolog [Benincasa hispida]1.13e-24291.03Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQ SLSDGDMKKLWKGLFYC+WHADKVPVQSELINRLASLLLHLDL LAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCR  VQVLEERV+F +DKFHGNGVNYQIASVFLEEL+PFLPLQKEV+DVLFKPFL SM KLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVLLGKIKSNLFDVILK GKQLL+ RK GDDVDS DD VV+GT+S TN FSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDF SSG+EIS P LQE
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN
        QDGDEVPTLVP+SS EEAPSEIS+VDVDV  +STDKALKKQKKSKKATD SGKKKAKKAKKAK+TTNGISDLVSENTP NKDNENIVVAN
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN

TrEMBL top hitse value%identityAlignment
A0A0A0LGX3 Uncharacterized protein4.33e-268100Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN
        QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN

A0A1S3BR64 ribosomal RNA processing protein 1 homolog1.85e-25595.38Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSM KLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN
        QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAKKAKKTTNGISDLVSEN+PANKDNENIVVAN
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN

A0A5A7U008 Ribosomal RNA processing protein 1-like protein1.85e-25595.38Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSM KLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN
        QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAKKAKKTTNGISDLVSEN+PANKDNENIVVAN
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN

A0A6J1D805 ribosomal RNA processing protein 1 homolog5.51e-23488.14Show/hide
Query:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR
        MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCVWHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMR
Subjt:  MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMR

Query:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP
        REWAGIDALRLDKFYLLIRRFLHQFFAL+KKHSWDLELCRRL+QVLEERV+F +DKFHGNGVNY IASVFLEELRPFLPL+KEVVDVLFKPFLLSM KLP
Subjt:  REWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLP

Query:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        DKVL+GKIKSNLFDV+LK GKQLLE RK GDDVDS DD VVYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Subjt:  DKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKK-AKKAKKAKKTTNGISDLVSENTPANKDNENIV
        QDGDEVPTLVP+SS EEAPS+IS+VDVDV  ESTDKALKKQKK+KKATD SGKKK AKKAKKAKKT NGISDLVSENTP NKDNENIV
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKK-AKKAKKAKKTTNGISDLVSENTPANKDNENIV

A0A6J1HKH7 ribosomal RNA processing protein 1 homolog B-like isoform X22.07e-22383.63Show/hide
Query:  EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRRE
        EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADK+ VQ+ELINRLASLLLHL+L LA QYFS+FL+TMRRE
Subjt:  EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRRE

Query:  WAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLPDK
        WAGIDALRLDKFYLLIRRF+HQFFALLKK+SWDLELCRR VQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL KEV+D++FKPF+LSM KL DK
Subjt:  WAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLPDK

Query:  VLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD
        V+LGKIKSNLFDV+LK GKQLLE RK G+D++S DD VVYGT+ LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Subjt:  VLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD

Query:  GDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVANDAI
        GDEVPTLVPISS      EIS+ DVDV  E TDKALKK+KK+KKATDGSGKKK KKAK   K TNGISDLVS NT  NKD+ENIVVANDAI
Subjt:  GDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVANDAI

SwissProt top hitse value%identityAlignment
P56182 Ribosomal RNA processing protein 1 homolog A6.8e-2130.8Show/hide
Query:  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQ--YFSVFLLTMRREWAGI
        L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK P+  E + R  S L+H   +   Q  +   F  TM REW GI
Subjt:  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQ--YFSVFLLTMRREWAGI

Query:  DALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFK---PFLLSMTKLPDKV
        D LRLDKFY+L+R  L++   +LK   W+      L+++L   +  +      NGV      +FLEEL   +  ++   D   K   PF     +  D +
Subjt:  DALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFK---PFLLSMTKLPDKV

Query:  LLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV
        +L  I   +F+ I+++    +E     +++D+ D+ V
Subjt:  LLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV

P56183 Ribosomal RNA processing protein 1 homolog A6.8e-2132.13Show/hide
Query:  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHL--DLSLAVQYFSVFLLTMRREWAGI
        L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK P+Q E + R  + L+H         Q+   F  TM REW GI
Subjt:  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHL--DLSLAVQYFSVFLLTMRREWAGI

Query:  DALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPF--LPLQKEVVDVLFKPFLLSMTKLPDKVL
        D LRLDKFY+L+R  L +    +K   WD     +L+++L   +  N D    +GV      +FLEEL       L  +       PF     +  D  +
Subjt:  DALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPF--LPLQKEVVDVLFKPFLLSMTKLPDKVL

Query:  LGKIKSNLFDVILKKGKQLLE
        L KI  ++F  I+++    +E
Subjt:  LGKIKSNLFDVILKKGKQLLE

Q14684 Ribosomal RNA processing protein 1 homolog B1.6e-2232.17Show/hide
Query:  LASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYF-SVFLLTMRREWAGIDALRL
        LASS K  RD+ ++     + +KT   T    S  ++ K+WKGLFYC+W  D+  +Q EL N +A L+  ++ S A   F   F  TM REW GID LRL
Subjt:  LASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYF-SVFLLTMRREWAGIDALRL

Query:  DKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFK---PFLLSMTKLPDKVLLGKI
        DK+Y+LIR  L Q F +LK++ W+    +  + VL + V   E +   NGV +    ++L+EL   +  ++ + D   K   PF     K  D  L+  I
Subjt:  DKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFK---PFLLSMTKLPDKVLLGKI

Query:  KSNLFDVILKKG-----KQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSS
           +F+ I+ +      + + E + +  D D   + +    VSL    S     LG +
Subjt:  KSNLFDVILKKG-----KQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSS

Q91YK2 Ribosomal RNA processing protein 1 homolog B2.3e-2435.09Show/hide
Query:  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSV--FLLTMRREWAGIDALR
        LASS K  RD+ +R  ++ +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q EL N + S L+H+  SL  QY  +  F  TM REW GID L+
Subjt:  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSV--FLLTMRREWAGIDALR

Query:  LDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPF--LPLQKEVVDVLFKPFLLSMTKLPDKVLLGKI
        LDK+Y+LIR  L Q F +LK+++W+       + +L + +   E +   NGV   +  V+LEEL       L  +    L  PF     K  D  L+  +
Subjt:  LDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPF--LPLQKEVVDVLFKPFLLSMTKLPDKVLLGKI

Query:  KSNLFDVILKKG----KQLLESRKRGDD
           +F+VI+ +     ++ +E RK  +D
Subjt:  KSNLFDVILKKG----KQLLESRKRGDD

Q9Y7M6 Ribosomal RNA-processing protein 1 homolog7.5e-2036.9Show/hide
Query:  VKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKF
        +K LA++++ TRDK L   ++ +L  +      D  KLWKGLFYC+W ADK   Q +L + LA+L+  + +   + + S F  TM REW GID LR DKF
Subjt:  VKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKF

Query:  YLLIRRFLHQFFALLKKHSWDLELCRRLV---QVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLP
        YLL+RRF    F  ++  S    L + +    Q+  +  +  E+    NG+ + +A ++ EELR   P
Subjt:  YLLIRRFLHQFFALLKKHSWDLELCRRLV---QVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLP

Arabidopsis top hitse value%identityAlignment
AT5G20600.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).1.2e-10055.2Show/hide
Query:  EEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRR
        E+ +  +++  SL+K LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVWHADK   QSELI+RL+S L  L L L++ YF+VFL TMRR
Subjt:  EEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRR

Query:  EWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLPD
        EW+ ID LRLDKFYLLIRRFLH FF+L+  +SWDLE  RRL+ +L +     +DKF GNGVNY I S F+EELRPFLPL+KEV+++LF PF+  M  + D
Subjt:  EWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLPD

Query:  KVLLGKIKSNLFDVILKKGKQLLESRKRGDD-VDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
        K+L+GKIKSNLFD +LK GK+LL  ++ GDD V   DD VV G+++L+ +F+  FYELGSSP+C QGNRK++FA+H+EF +LEKD  SS IE+S  +   
Subjt:  KVLLGKIKSNLFDVILKKGKQLLESRKRGDD-VDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE

Query:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKK
           DEVP  VP+S         S   V  G+ S  K LKK  K+KK
Subjt:  QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGTTGTTGAAGGAGATCAGAATTTCACTTCATTAGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTTCGTGTAATCATCAAGACATG
GCTTCCAACTCAAACGAGCCTTTCCGATGGCGATATGAAAAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCACGCCGACAAGGTTCCTGTTCAATCTGAGCTTATTA
ATCGTCTTGCTTCTCTGCTCCTCCATCTCGACCTATCGTTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACTATGCGTCGTGAATGGGCCGGGATTGATGCGCTCAGG
TTAGATAAGTTTTATCTTTTGATTCGTAGGTTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTCGTTTGGTTCAAGTTTTGGA
GGAAAGGGTGTATTTTAATGAGGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAG
TTGTTGATGTCCTGTTCAAGCCTTTCCTTCTTTCAATGACTAAACTGCCTGATAAAGTGTTGTTGGGAAAAATTAAGTCCAATCTTTTTGATGTGATACTGAAAAAGGGG
AAGCAGTTACTCGAGAGTCGAAAACGTGGAGATGATGTTGATTCGGTTGATGATACGGTTGTGTATGGGACAGTTTCCTTGACAAATCAATTCTCAACAACATTTTATGA
ATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTATTGTTTGCCATGCACGAAGAGTTTCAGAAGTTGGAGAAAGATTTTTTCTCATCAGGGATTGAGATTT
CGTTTCCAGATCTTCAAGAGCAAGATGGGGATGAAGTGCCTACTTTGGTTCCTATTTCAAGTATAGAAGAGGCTCCTTCGGAAATTTCCCTGGTTGATGTTGATGTGGGT
ACTGAATCCACTGATAAGGCACTTAAGAAGCAAAAAAAGAGTAAAAAGGCCACTGATGGAAGTGGCAAGAAGAAGGCTAAGAAGGCTAAGAAGGCAAAGAAGACCACAAA
CGGTATTTCTGATCTTGTTTCTGAAAATACTCCTGCGAATAAGGACAATGAGAATATAGTTGTTGCTAACGATGCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGTTGTTGAAGGAGATCAGAATTTCACTTCATTAGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTTCGTGTAATCATCAAGACATG
GCTTCCAACTCAAACGAGCCTTTCCGATGGCGATATGAAAAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCACGCCGACAAGGTTCCTGTTCAATCTGAGCTTATTA
ATCGTCTTGCTTCTCTGCTCCTCCATCTCGACCTATCGTTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACTATGCGTCGTGAATGGGCCGGGATTGATGCGCTCAGG
TTAGATAAGTTTTATCTTTTGATTCGTAGGTTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTCGTTTGGTTCAAGTTTTGGA
GGAAAGGGTGTATTTTAATGAGGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAG
TTGTTGATGTCCTGTTCAAGCCTTTCCTTCTTTCAATGACTAAACTGCCTGATAAAGTGTTGTTGGGAAAAATTAAGTCCAATCTTTTTGATGTGATACTGAAAAAGGGG
AAGCAGTTACTCGAGAGTCGAAAACGTGGAGATGATGTTGATTCGGTTGATGATACGGTTGTGTATGGGACAGTTTCCTTGACAAATCAATTCTCAACAACATTTTATGA
ATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTATTGTTTGCCATGCACGAAGAGTTTCAGAAGTTGGAGAAAGATTTTTTCTCATCAGGGATTGAGATTT
CGTTTCCAGATCTTCAAGAGCAAGATGGGGATGAAGTGCCTACTTTGGTTCCTATTTCAAGTATAGAAGAGGCTCCTTCGGAAATTTCCCTGGTTGATGTTGATGTGGGT
ACTGAATCCACTGATAAGGCACTTAAGAAGCAAAAAAAGAGTAAAAAGGCCACTGATGGAAGTGGCAAGAAGAAGGCTAAGAAGGCTAAGAAGGCAAAGAAGACCACAAA
CGGTATTTCTGATCTTGTTTCTGAAAATACTCCTGCGAATAAGGACAATGAGAATATAGTTGTTGCTAACGATGCAATTTGA
Protein sequenceShow/hide protein sequence
MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALR
LDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKG
KQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQDGDEVPTLVPISSIEEAPSEISLVDVDVG
TESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVANDAI