; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G884 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G884
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTHO complex subunit 3
Genome locationctg1:3585351..3588806
RNA-Seq ExpressionCucsat.G884
SyntenyCucsat.G884
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0000445 - THO complex part of transcription export complex (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR020472 - G-protein beta WD-40 repeat
IPR024977 - Anaphase-promoting complex subunit 4, WD40 domain
IPR036322 - WD40-repeat-containing domain superfamily
IPR040132 - TREX component Tex1/THOC3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149572.1 THO complex subunit 3 [Cucumis sativus]4.62e-22499.66Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP
        QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP

XP_010061402.1 THO complex subunit 3 [Eucalyptus grandis]1.07e-21594.52Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTG KLASGSVDQTARVWHIEPHGHGKVKD+ELKGHTDSVDQLCWDPKH+DLIATASGDKTVRLWDAR+GKCSQQAELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        H+AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNM+GEMFFLTTGNGTVEVLAYPSLRP++TLMAHTAGCYCIAIDPVG YFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
        +MLCVRTFTKLEWPVRTISFNHTG+Y+ASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKNKYQADEG+FRIFGFES
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES

XP_022155009.1 THO complex subunit 3 isoform X2 [Momordica charantia]2.01e-21896.92Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GKCSQQ ELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        H+AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAIDPVG YFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
        QMLCVRTFTKLEWPVRTISFN+TG+YIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES

XP_022946738.1 THO complex subunit 3 [Cucurbita moschata]1.80e-22198.97Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
        QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES

XP_038905145.1 THO complex subunit 3 [Benincasa hispida]3.12e-22298.97Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        HIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
        QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFE+
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES

TrEMBL top hitse value%identityAlignment
A0A0A0L651 WD_REPEATS_REGION domain-containing protein2.24e-22499.66Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP
        QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP

A0A1S3BM38 THO complex subunit 32.24e-22499.66Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP
        QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP

A0A6J1DNX6 THO complex subunit 3 isoform X29.74e-21996.92Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GKCSQQ ELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        H+AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAIDPVG YFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
        QMLCVRTFTKLEWPVRTISFN+TG+YIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES

A0A6J1G4N9 THO complex subunit 38.73e-22298.97Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
        QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES

A0A6J1KZA7 THO complex subunit 38.73e-22298.97Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
        QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFES

SwissProt top hitse value%identityAlignment
P14197 WD repeat-containing protein AAC31.0e-6036.86Show/hide
Query:  SVAWNCTGMKLASGSVDQTARVWHIEPHG----------------HGKVKD-VELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL
        SVAWN  G K+AS   D   RVW+ +P G                +  +K+ +ELKGH  S++++ W PK++DL+A+A  DK +++WD + GKC      
Subjt:  SVAWNCTGMKLASGSVDQTARVWHIEPHG----------------HGKVKD-VELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL

Query:  SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFN-YEVNEIAWNMTGEMFFLTTGNGTVEVLAY-----PSLRPIETLMAHTAGCYCIAIDP
        + ENI++ + PDG  I    RDD L ++D+   K +   KFN  E+N++ W+  G++  +    G +E   +       ++ ++TL  HTA  YC+  DP
Subjt:  SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFN-YEVNEIAWNMTGEMFFLTTGNGTVEVLAY-----PSLRPIETLMAHTAGCYCIAIDP

Query:  VGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQA
         G Y A GSADS+VSLWDI  M+CV+TF K  +P R++SF+  G++IA++S +  I+I ++++ + +H I C + ++S+ W+P   LLAYA  + N+   
Subjt:  VGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQA

Query:  DEGIFRIFGFES
        D  I R+FG+ S
Subjt:  DEGIFRIFGFES

Q29RH4 THO complex subunit 32.4e-8950.67Show/hide
Query:  FDSSFLQVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINIT
        F +   +VHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENINI 
Subjt:  FDSSFLQVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINIT

Query:  YKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLV
        + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD+LV
Subjt:  YKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLV

Query:  SLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIFG
        SLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++FG
Subjt:  SLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIFG

Q8VE80 THO complex subunit 32.4e-8950.67Show/hide
Query:  FDSSFLQVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINIT
        F +   +VHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENINI 
Subjt:  FDSSFLQVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINIT

Query:  YKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLV
        + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD+LV
Subjt:  YKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLV

Query:  SLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIFG
        SLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++FG
Subjt:  SLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIFG

Q96J01 THO complex subunit 33.1e-8951.37Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENINI + PDG 
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
         IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD+LVSLWD+ 
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIFG
        +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++FG
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGIFRIFG

Q9FKT5 THO complex subunit 35.0e-15687.03Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWN  G KLASGSVDQTAR+W+IEPHGH K KD+ELKGHTDSVDQLCWDPKHSDL+ATASGDK+VRLWDAR+GKC+QQ ELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        H+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+P++TL AHTAGCYCIAIDP G YFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQADEGIFRIFGFES
         MLC+RTFTKLEWPVRTISFN++GEYIASASEDLFIDI+NVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY  DEG+FRIFGFES
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQADEGIFRIFGFES

Arabidopsis top hitse value%identityAlignment
AT1G11160.1 Transducin/WD40 repeat-like superfamily protein1.8e-1221.34Show/hide
Query:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA
        V+ +A+N    +      +G +++      + +     H + C  +   P G + A GS+D+ + +WD  +  C++T+      + TI F+  G ++ S 
Subjt:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA

Query:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP
          D  + + ++  G+ +H+  C    + S++++P   LLA    D+     D   F + G   P
Subjt:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFESP

AT5G08390.1 Transducin/WD40 repeat-like superfamily protein3.7e-1323.12Show/hide
Query:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA
        ++ + ++ +  +      +GT+++      + + TL  H + C  +   P G +FA GS D+ + +WDI +  C+ T+      V  + F   G +I S 
Subjt:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA

Query:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFG
         ED  + + ++  G+ +H+       + S++++P   LLA    DK     D   F + G
Subjt:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFG

AT5G25150.1 TBP-associated factor 53.7e-1323.24Show/hide
Query:  SFLQVHSVAWNCT-----GMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL--SGEN
        +F+  H+   NC+     G  +A G  D + +VW +     G+     L+   DS DQ                          NG+ S    L  SG  
Subjt:  SFLQVHSVAWNCT-----GMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL--SGEN

Query:  INITYKPDGTHIAVGNRDDELTILDVR-KFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGS
         + T+ P G  +   + D  + +   +     V  +  NY V +  ++  G  F   + + T  + +   ++P+  +  H +   C+   P   Y A GS
Subjt:  INITYKPDGTHIAVGNRDDELTILDVR-KFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGS

Query:  ADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGD
        +D  V LWD+    CVR F      V +++ +  G Y+AS  ED  I + ++ T R +  +      NS  W+     L+Y+G+
Subjt:  ADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGD

AT5G56130.1 Transducin/WD40 repeat-like superfamily protein3.5e-15787.03Show/hide
Query:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
        +VHSVAWN  G KLASGSVDQTAR+W+IEPHGH K KD+ELKGHTDSVDQLCWDPKHSDL+ATASGDK+VRLWDAR+GKC+QQ ELSGENINITYKPDGT
Subjt:  QVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS
        H+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+P++TL AHTAGCYCIAIDP G YFAVGSADSLVSLWDIS
Subjt:  HIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDIS

Query:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQADEGIFRIFGFES
         MLC+RTFTKLEWPVRTISFN++GEYIASASEDLFIDI+NVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY  DEG+FRIFGFES
Subjt:  QMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQADEGIFRIFGFES

AT5G67320.1 WD-40 repeat family protein6.7e-2328.11Show/hide
Query:  VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL-SGENINITYKPDGT
        V ++ WN  G  LA+GS D  AR+W +    +G++    L  H   +  L W+ K  D + T S D+T  +WD +  +  QQ E  SG  +++ ++ +  
Subjt:  VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL-SGENINITYKPDGT

Query:  HIAVGNRDDELTILDVRKFKPVHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG---------YFAVGSA
          A  + D  + +  + + +P         EVN + W+ TG +    + + T ++        +  L  HT   Y I   P G            A  S 
Subjt:  HIAVGNRDDELTILDVRKFKPVHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG---------YFAVGSA

Query:  DSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA
        DS V LWD  + +MLC  +F     PV +++F+  GEYIAS S D  I I +++ G+ V        +  V WN + N +A
Subjt:  DSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAATATCATTAGTTGGAGGACATGGAGGAATCAGCCCAAGCTTTCAAGAATCTTCACAGCAGAGAGTATCAAGGTCACAAGAAGAAGGTTTTGTTTTTTCCTCTTATCA
TATTCCTTCTTTCATGCTGTTTTCTAAGCCGATTTTATTCACCCTTTTAATATTTTTTGATTCGTCTTTTCTTCAGGTACATTCTGTGGCATGGAATTGCACGGGCATGA
AGCTTGCTTCCGGTTCTGTTGATCAAACTGCTCGAGTTTGGCATATTGAGCCTCACGGACATGGTAAGGTTAAGGATGTTGAGTTGAAAGGGCACACTGATAGTGTAGAT
CAGCTTTGCTGGGACCCTAAACATTCTGATCTTATAGCGACTGCATCTGGAGACAAGACTGTTCGACTATGGGATGCTCGCAATGGGAAATGCTCACAGCAAGCTGAGCT
CAGTGGGGAAAATATCAACATCACCTACAAACCTGATGGGACACACATCGCTGTTGGAAATAGGGATGATGAACTTACAATTCTGGATGTTAGGAAGTTTAAACCAGTTC
ACAAGCGCAAGTTCAACTATGAGGTGAATGAAATTGCATGGAACATGACTGGGGAGATGTTTTTCCTGACAACTGGAAATGGTACTGTTGAAGTACTAGCATACCCATCG
CTTCGACCAATCGAAACTCTTATGGCTCATACAGCGGGTTGTTACTGCATTGCGATTGACCCTGTTGGAGGGTATTTTGCAGTTGGAAGTGCTGATTCATTAGTTAGCCT
ATGGGATATATCGCAGATGCTTTGTGTGCGAACATTTACAAAACTTGAATGGCCTGTTAGAACAATAAGTTTCAACCACACAGGAGAATACATTGCTTCTGCCAGTGAGG
ATTTGTTCATTGATATATCAAATGTTCAAACGGGACGAACGGTTCATCAGATTCCTTGTCGGGCTGCAATGAACAGTGTGGAGTGGAATCCTAAACATAACTTACTTGCA
TATGCTGGGGATGACAAGAACAAGTATCAGGCTGATGAAGGTATTTTTAGGATCTTTGGGTTTGAAAGTCCATGA
mRNA sequenceShow/hide mRNA sequence
AAAATATCATTAGTTGGAGGACATGGAGGAATCAGCCCAAGCTTTCAAGAATCTTCACAGCAGAGAGTATCAAGGTCACAAGAAGAAGGTTTTGTTTTTTCCTCTTATCA
TATTCCTTCTTTCATGCTGTTTTCTAAGCCGATTTTATTCACCCTTTTAATATTTTTTGATTCGTCTTTTCTTCAGGTACATTCTGTGGCATGGAATTGCACGGGCATGA
AGCTTGCTTCCGGTTCTGTTGATCAAACTGCTCGAGTTTGGCATATTGAGCCTCACGGACATGGTAAGGTTAAGGATGTTGAGTTGAAAGGGCACACTGATAGTGTAGAT
CAGCTTTGCTGGGACCCTAAACATTCTGATCTTATAGCGACTGCATCTGGAGACAAGACTGTTCGACTATGGGATGCTCGCAATGGGAAATGCTCACAGCAAGCTGAGCT
CAGTGGGGAAAATATCAACATCACCTACAAACCTGATGGGACACACATCGCTGTTGGAAATAGGGATGATGAACTTACAATTCTGGATGTTAGGAAGTTTAAACCAGTTC
ACAAGCGCAAGTTCAACTATGAGGTGAATGAAATTGCATGGAACATGACTGGGGAGATGTTTTTCCTGACAACTGGAAATGGTACTGTTGAAGTACTAGCATACCCATCG
CTTCGACCAATCGAAACTCTTATGGCTCATACAGCGGGTTGTTACTGCATTGCGATTGACCCTGTTGGAGGGTATTTTGCAGTTGGAAGTGCTGATTCATTAGTTAGCCT
ATGGGATATATCGCAGATGCTTTGTGTGCGAACATTTACAAAACTTGAATGGCCTGTTAGAACAATAAGTTTCAACCACACAGGAGAATACATTGCTTCTGCCAGTGAGG
ATTTGTTCATTGATATATCAAATGTTCAAACGGGACGAACGGTTCATCAGATTCCTTGTCGGGCTGCAATGAACAGTGTGGAGTGGAATCCTAAACATAACTTACTTGCA
TATGCTGGGGATGACAAGAACAAGTATCAGGCTGATGAAGGTATTTTTAGGATCTTTGGGTTTGAAAGTCCATGA
Protein sequenceShow/hide protein sequence
KISLVGGHGGISPSFQESSQQRVSRSQEEGFVFSSYHIPSFMLFSKPILFTLLIFFDSSFLQVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVD
QLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPS
LRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA
YAGDDKNKYQADEGIFRIFGFESP