; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G8870 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8870
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionexosome complex component RRP4 homolog
Genome locationctg1635:806384..810469
RNA-Seq ExpressionCucsat.G8870
SyntenyCucsat.G8870
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041865.1 exosome complex component RRP4-like protein isoform X2 [Cucumis melo var. makuwa]6.00e-21295.12Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV
        M+GLQLSLNH+QKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR YKPEVGDIVVGRV
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV

Query:  TEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        TEVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL
Subjt:  TEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        +QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKRG
        VHEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKRG

XP_008442058.1 PREDICTED: exosome complex component RRP4 homolog isoform X1 [Cucumis melo]4.58e-21795.18Show/hide
Query:  QCSSNMKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIV
        QCSS+M+GLQLSLNH+QKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIV
Subjt:  QCSSNMKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH
        VGRVTEVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS
        FHHL+QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
        LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG

XP_008442061.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo]8.62e-21495.41Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+GLQLSLNH+QKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL+
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

XP_031740749.1 exosome complex component RRP4 homolog [Cucumis sativus]1.53e-22999.69Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MKGLQLSLNH+QKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

XP_038882865.1 exosome complex component RRP4 homolog isoform X2 [Benincasa hispida]4.43e-20891.16Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+GLQ+SLNH+QKIRL+RAQERL+SLSSK NSDASV+VADTIPLNYEDGVLKGHGTLDLNGEV+A+ICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTV  YL+KRRKQHFHHLE
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        QYGIDLILGCNGFIWIGEHVDP   D MI+DQ++K EQKG KFEGTF NQVQ+ VYTPLETRQNICRTANAIRVLS LGFIMTVEVIMEIV+LSIS+NID
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKRG
        VHEMLGSEFCVLTAEKEVERR+SSKKRG
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKRG

TrEMBL top hitse value%identityAlignment
A0A1S3B4T9 exosome complex component RRP4 homolog isoform X24.17e-21495.41Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+GLQLSLNH+QKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL+
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

A0A1S3B5H2 exosome complex component RRP4 homolog isoform X12.22e-21795.18Show/hide
Query:  QCSSNMKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIV
        QCSS+M+GLQLSLNH+QKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIV
Subjt:  QCSSNMKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH
        VGRVTEVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS
        FHHL+QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
        LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG

A0A5A7TKA1 Exosome complex component RRP4-like protein isoform X22.90e-21295.12Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV
        M+GLQLSLNH+QKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR YKPEVGDIVVGRV
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV

Query:  TEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        TEVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL
Subjt:  TEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        +QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKRG
        VHEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKRG

A0A5D3C2G3 Exosome complex component RRP4-like protein isoform X24.17e-21495.41Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+GLQLSLNH+QKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL+
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog5.55e-20489.33Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+GLQ+SLN +QKIRL+RA E L+S+SSK NSDASVVVADTIPLNYEDGVLKGHGTLDL GEVVA+ICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQLLTVSPYL+KRRKQHFHHLE
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        QYGIDLILGCNGFIWIGEHVDP   D M+ED ++K EQKGSKFEG+FGNQVQE +YTPLETRQNICRTANAIRVLS LGFIM+VEVIME V+LSISLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKRG
        VHEMLGSEFCVLTAEKE ERR+SSKKRG
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp41.3e-4441.09Show/hide
Query:  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G + AS+ G V+RVNKLI V+ LR++Y PE+GD+++G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGN
        ++ AEV+    DG + +  RS KYGKL  G  L V P L+ R K H + L   G+D+IL  NG++W+ +H + +         + + E++ S  E  + N
Subjt:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGN

Query:  QVQEV--YTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIMEIVNLSISLNID
        +  E+  YT L  +R +IC    A R L     S   F  +  V   + +L++  N+D
Subjt:  QVQEV--YTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIMEIVNLSISLNID

Q13868 Exosome complex component RRP42.7e-4550.72Show/hide
Query:  SQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLD
        + ++RL  A++ L     +      VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++
Subjt:  SQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLD

Query:  INYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILG
         N   D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG
Subjt:  INYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILG

Query:  CNGFIWI
         NGFIWI
Subjt:  CNGFIWI

Q2KID0 Exosome complex component RRP41.6e-4550.73Show/hide
Query:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIW+
Subjt:  GFIWI

Q8VBV3 Exosome complex component RRP41.4e-4650.7Show/hide
Query:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL +A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI---GEHVD
        GFIWI    EH D
Subjt:  GFIWI---GEHVD

Q9ZVT7 Exosome complex component RRP4 homolog2.2e-11664.53Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+ LQL L+ +QK+R ERA ERL+SLSS  NSDASV+V D+IP+N++D  LKGHGT +++GE++A++CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        EVA KRWR+++N+ QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQLL V PYL+KR K HFH++
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        E  GIDLI+GCNGFIW+GEHV+       + D +   +QK  +   +     ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKR
        +H+MLGSEF V+ AE E ERR + +K+
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 41.6e-11764.53Show/hide
Query:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+ LQL L+ +QK+R ERA ERL+SLSS  NSDASV+V D+IP+N++D  LKGHGT +++GE++A++CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        EVA KRWR+++N+ QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQLL V PYL+KR K HFH++
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        E  GIDLI+GCNGFIW+GEHV+       + D +   +QK  +   +     ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKR
        +H+MLGSEF V+ AE E ERR + +K+
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAGAAAAAAGAGGAAAATCTACAGCCCTTCTCGTTCTCCTCTTTCTCCACGCACGCTGCCCTCCCTATTCACCTTCCAATTTCTTTTTTTTCCGTCTGCCCATCACACC
AGCCACCGCCGACCATTACGTCTTGGCCGCCGCAAGTCTCCGTGCATCATCTCAACCGTGTCTGACAAGTCGACTGTCTGATTCTTCAACTGCCGCTCTCGTCCGTAGTT
TCGAAAGGTTTCGCCGCTGCAGCCGCGTCTCCCCCACTCGTCAGAGTTCGCCGGAATTCCAAGAGCTTGCCGACGACGTCAACCATCTCTCGCCATTCTTTAGCACGCTG
ATTCGCCCGTTAGTTTCATTCTATTCCAACCGTCTCTCATCATCATCTCAGTGTTCATCAAATATGAAAGGTTTACAACTTTCCTTGAATCATAGCCAGAAGATTCGTCT
TGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGTAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGG
GACATGGGACCCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTCATCTATGTACGTGCCTTGCGTGCCAGATATAAACCG
GAGGTTGGTGATATCGTAGTGGGACGTGTTACAGAGGTTGCACCAAAACGTTGGAGATTGGATATAAATTATTGCCAAGATGCAGTTTTGATGCTTTCTTCGATGAACTT
GCCTGATGGTATTCAGAGAAGGCGAACTGCCGTTGATGAACTCAACATGCGGAGCATTTTTGAAGAAAATGATGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATG
GGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGCAAGCTTGAACGTGGTCAGCTGCTCACAGTTTCTCCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTG
GAGCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTTGATCCCAAAGTGGTGGATACGATGATAGAGGATCAAGTTGATAAACC
TGAACAAAAGGGTTCGAAATTTGAAGGAACTTTTGGCAACCAAGTGCAAGAAGTATATACTCCATTAGAGACACGACAGAATATCTGCAGAACTGCAAATGCGATTCGAG
TATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTGATGTGCACGAAATGCTTGGCTCAGAGTTCTGT
GTTCTCACGGCAGAAAAAGAGGTTGAACGACGTTCTTCGAGTAAGAAGAGGGGGTAA
mRNA sequenceShow/hide mRNA sequence
AGAGAAAAAAGAGGAAAATCTACAGCCCTTCTCGTTCTCCTCTTTCTCCACGCACGCTGCCCTCCCTATTCACCTTCCAATTTCTTTTTTTTCCGTCTGCCCATCACACC
AGCCACCGCCGACCATTACGTCTTGGCCGCCGCAAGTCTCCGTGCATCATCTCAACCGTGTCTGACAAGTCGACTGTCTGATTCTTCAACTGCCGCTCTCGTCCGTAGTT
TCGAAAGGTTTCGCCGCTGCAGCCGCGTCTCCCCCACTCGTCAGAGTTCGCCGGAATTCCAAGAGCTTGCCGACGACGTCAACCATCTCTCGCCATTCTTTAGCACGCTG
ATTCGCCCGTTAGTTTCATTCTATTCCAACCGTCTCTCATCATCATCTCAGTGTTCATCAAATATGAAAGGTTTACAACTTTCCTTGAATCATAGCCAGAAGATTCGTCT
TGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGTAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGG
GACATGGGACCCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTCATCTATGTACGTGCCTTGCGTGCCAGATATAAACCG
GAGGTTGGTGATATCGTAGTGGGACGTGTTACAGAGGTTGCACCAAAACGTTGGAGATTGGATATAAATTATTGCCAAGATGCAGTTTTGATGCTTTCTTCGATGAACTT
GCCTGATGGTATTCAGAGAAGGCGAACTGCCGTTGATGAACTCAACATGCGGAGCATTTTTGAAGAAAATGATGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATG
GGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGCAAGCTTGAACGTGGTCAGCTGCTCACAGTTTCTCCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTG
GAGCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTTGATCCCAAAGTGGTGGATACGATGATAGAGGATCAAGTTGATAAACC
TGAACAAAAGGGTTCGAAATTTGAAGGAACTTTTGGCAACCAAGTGCAAGAAGTATATACTCCATTAGAGACACGACAGAATATCTGCAGAACTGCAAATGCGATTCGAG
TATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTGATGTGCACGAAATGCTTGGCTCAGAGTTCTGT
GTTCTCACGGCAGAAAAAGAGGTTGAACGACGTTCTTCGAGTAAGAAGAGGGGGTAA
Protein sequenceShow/hide protein sequence
REKRGKSTALLVLLFLHARCPPYSPSNFFFFRLPITPATADHYVLAAASLRASSQPCLTSRLSDSSTAALVRSFERFRRCSRVSPTRQSSPEFQELADDVNHLSPFFSTL
IRPLVSFYSNRLSSSSQCSSNMKGLQLSLNHSQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKP
EVGDIVVGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLGSEFC
VLTAEKEVERRSSSKKRG