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Cucsat.G8976 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G8976
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPolyadenylate-binding protein 1-B-binding protein
Genome locationctg1635:1530860..1531519
RNA-Seq ExpressionCucsat.G8976
SyntenyCucsat.G8976
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066828.1 uncharacterized protein E6C27_scaffold271G001860 [Cucumis melo var. makuwa]1.03e-8996.67Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        ISGLSVSYV+GFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVF TFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
        FGLVAQTILYFVCKSYHHQNIDK  LSDHLEVY GDYVPLKEQDVQLGEL
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

XP_004146074.1 uncharacterized protein LOC101219186 [Cucumis sativus]6.86e-94100Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
        FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

XP_016903071.1 PREDICTED: uncharacterized protein LOC103501766 [Cucumis melo]9.89e-8996.67Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        ISGLSVSYV+GFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVF TFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
        FGLVAQTILYFVCKSYHHQNIDK  LSDHLEVY GDYVPLKEQDVQLGEL
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

XP_023536158.1 uncharacterized protein LOC111797403 [Cucurbita pepo subsp. pepo]1.62e-7785.91Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        I+G+SVSYV+GFVYISVVWHLA VVSVLEDVYGIQAMLK KELIKGK+VL C VF TFTVLFL  QLVFQT+VVLGSS +YGLRIVLG+LCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGE
        FGLVAQTI+YFVCKSYHHQNIDK  LSDHLEVY GDYVPL  QDVQLGE
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGE

XP_038896532.1 uncharacterized protein LOC120084785 [Benincasa hispida]4.34e-8491.28Show/hide
Query:  SGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFLF
        +G+SVSYV+GFVYISVVWHLASVVSVLEDVYGIQAMLK KEL+KGKMVLSCGVF TFTVLFLG QLVFQT VVLGSSKY GLRIVLGILCFLLLFKVFLF
Subjt:  SGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFLF

Query:  GLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
        GLVAQTI+YFVCKSYHHQNIDK  LSDHLEVY GDYVPLKEQDVQLGEL
Subjt:  GLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

TrEMBL top hitse value%identityAlignment
A0A0A0KZY9 Uncharacterized protein3.32e-94100Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
        FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

A0A1S4E4B3 uncharacterized protein LOC1035017664.79e-8996.67Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        ISGLSVSYV+GFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVF TFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
        FGLVAQTILYFVCKSYHHQNIDK  LSDHLEVY GDYVPLKEQDVQLGEL
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

A0A5A7VGD2 Uncharacterized protein4.97e-9096.67Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        ISGLSVSYV+GFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVF TFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
        FGLVAQTILYFVCKSYHHQNIDK  LSDHLEVY GDYVPLKEQDVQLGEL
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

A0A6J1FCQ1 uncharacterized protein LOC1114429097.86e-7885.91Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        I+G+SVSYV+GFVYISVVWHLA VVSVLEDVYGIQAMLK KELIKGK+VL C VF TFTVLFL  QLVFQT+VVLGSS +YGLRIVLG+LCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGE
        FGLVAQTI+YFVCKSYHHQNIDK  LSDHLEVY GDYVPL  QDVQLGE
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGE

A0A6J1IDW8 uncharacterized protein LOC1114760707.86e-7885.33Show/hide
Query:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL
        I+G+SVSYV+GFVYISVVWHLA VVSVLEDVYGIQAMLK KELIKGK+VL C VF TFTVLFL  QLVFQT+VVLGSS +YG RIVLG+LCFLLLFKVFL
Subjt:  ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
        FGLVAQTI+YFVCKSYHHQNIDK  LSDHLEVY GDYVPL  QDVQLGEL
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31130.1 unknown protein1.5e-2449.33Show/hide
Query:  LSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQL--VFQTLVVLGSSKYYGL-RIVLGILCFLLLFKVFL
        +SV Y    VY + +WHL SV+SVLE VYGI AM K  EL+KGK  ++ G+ F +  LFL G +  VF  +VV G  KY    R ++G L   +L  V L
Subjt:  LSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQL--VFQTLVVLGSSKYYGL-RIVLGILCFLLLFKVFL

Query:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL
         GL+ Q++ Y+VCKSYHHQ IDK  L D L  Y GDYVPLK  ++QL +L
Subjt:  FGLVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL

AT2G18680.1 unknown protein3.7e-0732.48Show/hide
Query:  LSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFLFGL
        L + + V   Y+++VW+L+ V+S+LED YGIQA+ K  +++KG       +   F +L  G   + Q L ++  S  + + +  G++    +F V +F L
Subjt:  LSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFLFGL

Query:  VAQTILYFVCKSYHHQN
        V  T+ YF CKS   Q+
Subjt:  VAQTILYFVCKSYHHQN

AT2G18690.1 unknown protein5.4e-0628.57Show/hide
Query:  LSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFLFGL
        L + + V   Y ++ W+L+ V+S+LE+ YG QA+ K  +++KG       +   F +L  G   + Q L ++   +   + +  G +   L+F V +F L
Subjt:  LSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFLFGL

Query:  VAQTILYFVCKSYHHQNID
        V  T+ YF CKS   ++++
Subjt:  VAQTILYFVCKSYHHQNID

AT4G19950.1 unknown protein5.7e-2448.92Show/hide
Query:  VSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVL--FLGGQLVFQTLVVLGSSKY-YGLRIVLGILCFLLLFKVFLFG
        V ++V  VY++ +WHLASVVSVLE +YG+ AM K  EL+KGK +++C + F + V   F+ G  VF  +VV G   Y    RIV G     +L  V L G
Subjt:  VSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVL--FLGGQLVFQTLVVLGSSKY-YGLRIVLGILCFLLLFKVFLFG

Query:  LVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLK
        L+ Q++ Y+VCKS+HHQ IDK  L DHL  Y G+YVPLK
Subjt:  LVAQTILYFVCKSYHHQNIDKPLLSDHLEVYHGDYVPLK

AT5G44860.1 unknown protein1.6e-2148.85Show/hide
Query:  VYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGL--RIVLGILCFLLLFKVFLFGLVAQTILY
        VY++  WHLASVVSVLE +YGI AM K  EL+ G+  ++C + F +  L      VF  +VV G    +GL  +IV+G     +L  V L GL+ Q++ Y
Subjt:  VYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGL--RIVLGILCFLLLFKVFLFGLVAQTILY

Query:  FVCKSYHHQNIDKPLLSDHLEVYHGDYVPLK
        +VCKS+HHQ IDK  L DHL  Y GDYVPLK
Subjt:  FVCKSYHHQNIDKPLLSDHLEVYHGDYVPLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTCTGGGCTTTCGGTTTCATATGTTGTAGGGTTTGTGTATATAAGCGTTGTGTGGCATTTGGCGAGTGTTGTCTCCGTTTTGGAGGATGTGTATGGAATTCAAGCAAT
GTTGAAGGGTAAGGAACTGATTAAGGGGAAGATGGTGCTTTCTTGTGGTGTTTTCTTTACTTTTACTGTGTTGTTTCTTGGGGGTCAGTTGGTTTTTCAGACTTTGGTTG
TGCTTGGAAGTTCCAAGTACTATGGATTGAGAATTGTTCTTGGAATTCTTTGTTTCTTGTTGCTGTTCAAAGTGTTCCTCTTTGGTCTTGTTGCTCAAACAATCCTTTAC
TTCGTTTGCAAATCATATCATCATCAAAATATTGACAAGCCCTTATTATCTGACCATTTGGAAGTGTATCATGGGGATTATGTTCCATTGAAGGAACAGGATGTTCAATT
AGGCGAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATTTCTGGGCTTTCGGTTTCATATGTTGTAGGGTTTGTGTATATAAGCGTTGTGTGGCATTTGGCGAGTGTTGTCTCCGTTTTGGAGGATGTGTATGGAATTCAAGCAAT
GTTGAAGGGTAAGGAACTGATTAAGGGGAAGATGGTGCTTTCTTGTGGTGTTTTCTTTACTTTTACTGTGTTGTTTCTTGGGGGTCAGTTGGTTTTTCAGACTTTGGTTG
TGCTTGGAAGTTCCAAGTACTATGGATTGAGAATTGTTCTTGGAATTCTTTGTTTCTTGTTGCTGTTCAAAGTGTTCCTCTTTGGTCTTGTTGCTCAAACAATCCTTTAC
TTCGTTTGCAAATCATATCATCATCAAAATATTGACAAGCCCTTATTATCTGACCATTTGGAAGTGTATCATGGGGATTATGTTCCATTGAAGGAACAGGATGTTCAATT
AGGCGAATTGTAA
Protein sequenceShow/hide protein sequence
ISGLSVSYVVGFVYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVFQTLVVLGSSKYYGLRIVLGILCFLLLFKVFLFGLVAQTILY
FVCKSYHHQNIDKPLLSDHLEVYHGDYVPLKEQDVQLGEL