; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G9053 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9053
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description50S ribosomal protein L13
Genome locationctg1635:1686483..1689481
RNA-Seq ExpressionCucsat.G9053
SyntenyCucsat.G9053
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.41e-15889.92Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N   SN++ PR SL+  FPLP SKSSFL TQT+I+LTS  K S  QVRAQELDRVPLEQRWMF+GDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_004146016.1 50S ribosomal protein L13, chloroplastic [Cucumis sativus]7.26e-176100Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_008463780.1 PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo]2.22e-17096.37Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+LTNGTTSN+S P NSLLVAFPLPHSKSSFLLTQT+I LTSNSKRSAL+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]5.91e-15990.32Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N   SN++ PR SL+  FPLP SKSSFL TQT+I+LTS  K S  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]4.16e-15990.73Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL NG  SN++ PR SL+  FPL  SKSSFL TQT+I+LTS  K S LQVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein3.51e-176100Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A1S3CK07 50S ribosomal protein L13, chloroplastic1.07e-17096.37Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+LTNGTTSN+S P NSLLVAFPLPHSKSSFLLTQT+I LTSNSKRSAL+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like2.24e-15688.71Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF +HSTL NG+ SN+  PR S +  FPLP SKS  L TQT+I+L S SK S +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like2.86e-15990.32Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N   SN++ PR SL+  FPLP SKSSFL TQT+I+LTS  K S  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like3.88e-15789.11Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHST  N   SN++ PR SL+  FPLP SKSSFL TQT+I+LTS  K S  QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

SwissProt top hitse value%identityAlignment
B8HMT1 50S ribosomal protein L131.8e-5067.12Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK  P YTPS+D G FVIVVNAEK+AV+GKKRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR
        ERIIEHAV+GMLPK  LGR LF  LKVY GPDHPH+AQKP  L ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR

P12629 50S ribosomal protein L13, chloroplastic4.5e-8164.31Show/hide
Query:  ATMAMLCASSSTPTFSLHSTLTNGT----TSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-ELDRVPLEQRWMFEGDELDGPDI
        ATMA  CASS T   +       GT    T   SFPR ++  A  +   KS    T  S   T   ++    V+ +  +  VPL+QRWMF  +E  GPDI
Subjt:  ATMAMLCASSSTPTFSLHSTLTNGT----TSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-ELDRVPLEQRWMFEGDELDGPDI

Query:  WNKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRI
        WN TWYPK+ADHV T+K WYVVDATD ILGR+ASTIA HIRGK+L +YTPSVDMGAFVIVVNA+K+AVSGKKRTQKLYRRHSGRPGG+  ETFDQLQ+RI
Subjt:  WNKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRI

Query:  PERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        PERIIEHAVRGMLPKGRLGR LFNHLKVYKG +HPH+AQ+P+DLP+RDKRI  E+
Subjt:  PERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

Q3MF94 50S ribosomal protein L139.1e-5067.59Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNAEK+AV+GKKRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI

Q8YPK6 50S ribosomal protein L132.7e-4966.9Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNA+K+AV+GKKRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI

Q9SYL9 50S ribosomal protein L13, chloroplastic5.3e-9068.38Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC SSST   S  S  ++G+     F          L  S ++       + + +NSKR  LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEK+AVSGKKR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP+DLPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein3.8e-9168.38Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC SSST   S  S  ++G+     F          L  S ++       + + +NSKR  LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEK+AVSGKKR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP+DLPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein4.3e-1837.6Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA++I  +G+K T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVD
               L++++G +HP    KP++
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVD

AT3G01790.2 Ribosomal protein L13 family protein4.3e-1837.6Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA++I  +G+K T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVD
               L++++G +HP    KP++
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAAAATAATGGTAATGTAGAAGAGAAGTTGTGTTTGGCAAATTTATCCATTCCCACCGTTTTCCCTTTTCTCATCTCCGAATTCACAAAGGGGCAAGAAGGAGTCTT
ATCCACATTCCATAGCAGCAATTCACCAGCTGAAAGAGCCACTGCCAGAGCTACAATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCACTC
TCACCAATGGAACCACAAGTAACAAAAGCTTTCCCAGAAACTCACTCCTTGTTGCCTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCTCCATTTCT
CTAACCTCCAACTCCAAGAGGTCGGCCCTTCAAGTGCGAGCCCAAGAGCTGGATCGTGTCCCTTTGGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGA
TATATGGAATAAAACGTGGTACCCGAAGGCGGCAGATCATGTGAACACAGAAAAACCTTGGTACGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCAACTA
TTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTATACTCCTAGTGTGGATATGGGTGCTTTTGTGATTGTGGTAAATGCAGAAAAAATTGCGGTGTCTGGTAAAAAG
AGGACTCAGAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACTGTAGAAACTTTTGATCAGCTACAGCAGAGAATTCCTGAAAGAATTATCGAGCATGCTGT
TCGTGGTATGCTTCCAAAAGGGAGGCTTGGAAGAGCACTCTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGACCTGCCAA
TTAGGGACAAAAGGATAAACAAAGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
AAGAAAAATAATGGTAATGTAGAAGAGAAGTTGTGTTTGGCAAATTTATCCATTCCCACCGTTTTCCCTTTTCTCATCTCCGAATTCACAAAGGGGCAAGAAGGAGTCTT
ATCCACATTCCATAGCAGCAATTCACCAGCTGAAAGAGCCACTGCCAGAGCTACAATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCACTC
TCACCAATGGAACCACAAGTAACAAAAGCTTTCCCAGAAACTCACTCCTTGTTGCCTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCTCCATTTCT
CTAACCTCCAACTCCAAGAGGTCGGCCCTTCAAGTGCGAGCCCAAGAGCTGGATCGTGTCCCTTTGGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGA
TATATGGAATAAAACGTGGTACCCGAAGGCGGCAGATCATGTGAACACAGAAAAACCTTGGTACGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCAACTA
TTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTATACTCCTAGTGTGGATATGGGTGCTTTTGTGATTGTGGTAAATGCAGAAAAAATTGCGGTGTCTGGTAAAAAG
AGGACTCAGAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACTGTAGAAACTTTTGATCAGCTACAGCAGAGAATTCCTGAAAGAATTATCGAGCATGCTGT
TCGTGGTATGCTTCCAAAAGGGAGGCTTGGAAGAGCACTCTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGACCTGCCAA
TTAGGGACAAAAGGATAAACAAAGAAAGATAG
Protein sequenceShow/hide protein sequence
KKNNGNVEEKLCLANLSIPTVFPFLISEFTKGQEGVLSTFHSSNSPAERATARATMAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSIS
LTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKK
RTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER