; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G9142 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9142
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSWIB domain-containing protein
Genome locationctg1658:328374..330419
RNA-Seq ExpressionCucsat.G9142
SyntenyCucsat.G9142
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136946.1 uncharacterized protein LOC101217337 [Cucumis sativus]1.67e-91100Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
Subjt:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_008455019.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis melo]2.72e-8493.01Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSN---LKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFIAVKPSLLVVKPSPTTSSS+   LKHLNQLPLPDLRFPRTVTFA AS QATAP REPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSN---LKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        ENNLQKPS+KKVI CDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  ENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_022952608.1 uncharacterized protein LOC111455244 [Cucurbita moschata]3.03e-6475Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        MAF+STF++ +PSLLV + S   SS  +KH  QLPLP+LRF RT+TFA AS Q TA SR+PRGI KPR+ISPE+QALVGAPEISRT+ALKVIW +IKE+N
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        LQKPS+KK+I CDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_023553864.1 uncharacterized protein LOC111811315 [Cucurbita pepo subsp. pepo]3.03e-6475Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        MAF+STF++ +PSLLV + S   SS  +KH  QLPLP+LRF RT+TFA AS Q TA SR+PRGI KPR+ISPE+QALVGAPEISRTQALKVIW +IKE+N
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        LQKP++KK+I CDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_038888173.1 uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]1.11e-6680Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        MAFLSTFI+ +PSLLVVK S T +S  +K   QLPLP+LRF RTVTFA AS QATA  R+PRGI KPR+ISPE+QALVGAPEISRTQALKVIWA+IKE+N
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        LQKPS+KKVI CDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

TrEMBL top hitse value%identityAlignment
A0A0A0K2G6 Brg-1 associated factor8.10e-92100Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
Subjt:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A1S3C0N2 SWI/SNF complex component SNF12 homolog1.32e-8493.01Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSN---LKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFIAVKPSLLVVKPSPTTSSS+   LKHLNQLPLPDLRFPRTVTFA AS QATAP REPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSN---LKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        ENNLQKPS+KKVI CDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  ENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1GL33 uncharacterized protein LOC1114552441.47e-6475Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        MAF+STF++ +PSLLV + S   SS  +KH  QLPLP+LRF RT+TFA AS Q TA SR+PRGI KPR+ISPE+QALVGAPEISRT+ALKVIW +IKE+N
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        LQKPS+KK+I CDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1IAA1 uncharacterized protein LOC1114710822.96e-6475.71Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        MAF+STF++ + SLL+ + S   SS  +KH  QLPLP+LRF RT+TFA AS QATA SR+PRGI KPR+ISPE+QALVGAPEISRTQALKVIWA+IKE+N
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        LQKPS+KK+I CDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1JNZ3 uncharacterized protein LOC1114861971.38e-6073.57Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        MAF+STFI+ + SLL V+ S T+SS  +KH  Q P  +L F RTVTFA  S QATA  R+PRGI KP++ISPE+QALVG PEISRTQALKVIWA+IKE+N
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        LQKPS+KKVI CDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  LQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.6e-0942.03Show/hide
Query:  KQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIF
        K+   P+  P  + KP K+SP+L   +G  ++SR Q +K +W YIK ++LQ P++K+ I CD+KLK +F
Subjt:  KQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIF

Q05024 Protein TRI12.8e-0950Show/hide
Query:  ISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGK
        +S  LQ  +G+ E+ RTQ +K+IW YIKE++LQ P +++ I CDEK++ IFG K
Subjt:  ISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGK

Q08747 Upstream activation factor subunit UAF308.1e-0949.12Show/hide
Query:  TKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFG
        T+   +S  L +L+G  E++RT+ ++ +WAYIK +NLQ P+NKK I CDEKL+ I G
Subjt:  TKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFG

Q196Z0 Putative SWIB domain-containing protein 070L2.7e-0441.18Show/hide
Query:  GITKPRKISPELQALV----GAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEV
        G+ KPR IS  +        G  E SR    K + AYIK+N+L+  SNK +I  D KLKK+    D V
Subjt:  GITKPRKISPELQALV----GAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEV

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein2.7e-2048.45Show/hide
Query:  RTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHF
        RT+    A+ +A   + E +GI K R +S +L +  G  E++R  ALK +W Y+K +NLQ P+NKK I CD+KLK IF GKD+VG  EI  L+SPHF
Subjt:  RTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHF

AT2G14880.1 SWIB/MDM2 domain superfamily protein1.8e-3256.2Show/hide
Query:  STFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPS-REPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQK
        STF+ +K +      +P+T  S+L+  +  P   LR  R VT A  S + TA + R PRGI KPR +SPE+Q +V  PEI+RTQALK IWAYIKE++LQ 
Subjt:  STFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPS-REPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQK

Query:  PSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        P NK+ I CDEKLKKIF G+D VGFLEIA LI PHFL
Subjt:  PSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.4e-1950.52Show/hide
Query:  RTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHF
        R +    AS       R+  GI K   +S  L   +G  E+SRT A+K IW YIK NNLQ P NK+ I CDE+LK IF GKD VGFLEI+ L+S HF
Subjt:  RTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHF

AT3G03590.1 SWIB/MDM2 domain superfamily protein5.2e-1951.09Show/hide
Query:  SKQATAPSREPR--GITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        +K  +   + PR  GI K   +SP L   +G  E SRT A+K IW YIK ++LQ P++K+ I CDE LK IF GKD+VGFLEI+ L+SPHF+
Subjt:  SKQATAPSREPR--GITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL

AT4G34290.1 SWIB/MDM2 domain superfamily protein8.5e-3054.61Show/hide
Query:  FLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQ---ATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEN
        F +TF+ V  + L    S   S S+L+     P  +LR  R VT A A+      T  +REPRGI KPR +S  +Q +VG PEI RTQALK IWAYIKE+
Subjt:  FLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQ---ATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEN

Query:  NLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL
        +LQ P NK+ I CDEKLKKIF GK+ VGFLEIA LI PHFL
Subjt:  NLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAGLISPHFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCCTCTCCACCTTCATCGCCGTCAAACCGTCGCTCCTCGTCGTCAAACCCTCCCCCACCACCTCCTCCTCCAACCTCAAGCATCTCAATCAACTCCCTCTCCC
TGATTTGCGCTTCCCCCGCACTGTTACCTTCGCTTTAGCGTCCAAGCAGGCCACTGCCCCTAGCCGGGAGCCCCGTGGCATCACGAAGCCCAGGAAAATTTCACCGGAGT
TGCAAGCGCTTGTCGGCGCTCCTGAGATTTCCCGCACTCAAGCTCTTAAGGTCATTTGGGCTTACATTAAAGAAAATAATCTTCAGAAACCAAGCAACAAGAAAGTCATA
GCTTGCGACGAGAAACTGAAGAAGATATTTGGAGGGAAAGATGAGGTTGGATTTCTGGAGATTGCAGGTTTAATAAGTCCACACTTTCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCCTCTCCACCTTCATCGCCGTCAAACCGTCGCTCCTCGTCGTCAAACCCTCCCCCACCACCTCCTCCTCCAACCTCAAGCATCTCAATCAACTCCCTCTCCC
TGATTTGCGCTTCCCCCGCACTGTTACCTTCGCTTTAGCGTCCAAGCAGGCCACTGCCCCTAGCCGGGAGCCCCGTGGCATCACGAAGCCCAGGAAAATTTCACCGGAGT
TGCAAGCGCTTGTCGGCGCTCCTGAGATTTCCCGCACTCAAGCTCTTAAGGTCATTTGGGCTTACATTAAAGAAAATAATCTTCAGAAACCAAGCAACAAGAAAGTCATA
GCTTGCGACGAGAAACTGAAGAAGATATTTGGAGGGAAAGATGAGGTTGGATTTCTGGAGATTGCAGGTTTAATAAGTCCACACTTTCTATAA
Protein sequenceShow/hide protein sequence
MAFLSTFIAVKPSLLVVKPSPTTSSSNLKHLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVI
ACDEKLKKIFGGKDEVGFLEIAGLISPHFL