; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G919 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G919
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotein LHCP TRANSLOCATION DEFECT
Genome locationctg1:4295317..4297879
RNA-Seq ExpressionCucsat.G919
SyntenyCucsat.G919
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0090391 - granum assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0009941 - chloroplast envelope (cellular component)
InterPro domainsIPR036770 - Ankyrin repeat-containing domain superfamily
IPR044242 - Protein LHCP TRANSLOCATION DEFECT-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152919.1 protein LHCP TRANSLOCATION DEFECT [Cucumis sativus]1.15e-116100Show/hide
Query:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

XP_008463435.1 PREDICTED: protein LHCP TRANSLOCATION DEFECT [Cucumis melo]2.61e-11396.43Show/hide
Query:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MASLSCT+SINLTPRSFNSRPPFKL SHFLGLQSNLRWLSP+SIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTA+DRA+NEEIKDFIL FSAKKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

XP_022932181.1 protein LHCP TRANSLOCATION DEFECT [Cucurbita moschata]2.20e-10389.88Show/hide
Query:  MASLSCTS-SINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        MAS+SCTS SINL+P S NSRPP KLGS FLGLQSNLRW+SP++IGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDF RDDVEQYFNYMGMLAVEGTYDK
Subjt:  MASLSCTS-SINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKK
        MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTA+DRA N+EIKDFILNFS +K
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKK

XP_022985270.1 protein LHCP TRANSLOCATION DEFECT [Cucurbita maxima]2.68e-10490.48Show/hide
Query:  MASLSCTS-SINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        MAS+SCTS SINL+P SFNSRPP KLGS FLGLQSNLRW+SP++IGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDF RDDVEQYFNYMGMLAVEGTYDK
Subjt:  MASLSCTS-SINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKK
        MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTA+DRA N+EIKDFILNFS +K
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKK

XP_038903413.1 protein LHCP TRANSLOCATION DEFECT [Benincasa hispida]6.89e-10992.86Show/hide
Query:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MASLSCT+S+NLTPRSFNSRPPFKL S FLGLQSNLRW+SPV+IGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA+YDVKDVDGRTA+DRA NEEIKDFILN S K A
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

TrEMBL top hitse value%identityAlignment
A0A0A0L309 ANK_REP_REGION domain-containing protein5.57e-117100Show/hide
Query:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

A0A1S3CJ75 protein LHCP TRANSLOCATION DEFECT1.26e-11396.43Show/hide
Query:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MASLSCT+SINLTPRSFNSRPPFKL SHFLGLQSNLRWLSP+SIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTA+DRA+NEEIKDFIL FSAKKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

A0A5D3BT07 Protein LHCP TRANSLOCATION DEFECT1.26e-11396.43Show/hide
Query:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MASLSCT+SINLTPRSFNSRPPFKL SHFLGLQSNLRWLSP+SIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTA+DRA+NEEIKDFIL FSAKKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

A0A6J1EVN2 protein LHCP TRANSLOCATION DEFECT1.07e-10389.88Show/hide
Query:  MASLSCTS-SINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        MAS+SCTS SINL+P S NSRPP KLGS FLGLQSNLRW+SP++IGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDF RDDVEQYFNYMGMLAVEGTYDK
Subjt:  MASLSCTS-SINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKK
        MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTA+DRA N+EIKDFILNFS +K
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKK

A0A6J1JAV9 protein LHCP TRANSLOCATION DEFECT1.30e-10490.48Show/hide
Query:  MASLSCTS-SINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        MAS+SCTS SINL+P SFNSRPP KLGS FLGLQSNLRW+SP++IGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDF RDDVEQYFNYMGMLAVEGTYDK
Subjt:  MASLSCTS-SINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKK
        MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTA+DRA N+EIKDFILNFS +K
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKK

SwissProt top hitse value%identityAlignment
A2YLX7 Protein LHCP TRANSLOCATION DEFECT3.1e-4760.57Show/hide
Query:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSP------VSIGPSNGSRATCWFNL-RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAV
        MAS+ CT  ++    S ++    +         + L WL P      V    S     TC+F    ++AEGAGIYGSQ RDDF+RDDVEQYFNYMGMLAV
Subjt:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSP------VSIGPSNGSRATCWFNL-RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAV

Query:  EGTYDKMEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        EGTYDKMEALL+QDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTA+DRA  ++ ++FIL F+A  A
Subjt:  EGTYDKMEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

A3BKF2 Protein LHCP TRANSLOCATION DEFECT3.1e-4760.57Show/hide
Query:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSP------VSIGPSNGSRATCWFNL-RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAV
        MAS+ CT  ++    S ++    +         + L WL P      V    S     TC+F    ++AEGAGIYGSQ RDDF+RDDVEQYFNYMGMLAV
Subjt:  MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSP------VSIGPSNGSRATCWFNL-RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAV

Query:  EGTYDKMEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        EGTYDKMEALL+QDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTA+DRA  ++ ++FIL F+A  A
Subjt:  EGTYDKMEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

Q8VY88 Protein LHCP TRANSLOCATION DEFECT6.8e-5565.09Show/hide
Query:  SLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQN---AEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        S SC  S+  +  S  S  P  L S FLG ++    + P  +GPSNGSR TCWF   +N   AE AGIYGSQSRDDF+RDDVEQYFNYMGMLAVEGTY K
Subjt:  SLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQN---AEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        MEALL+ +IHPVDILLMLAA+EGD+PK+EELL+AGA Y VKD DGRTA+DRA +EEI+D IL +S +KA
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA

Arabidopsis top hitse value%identityAlignment
AT1G50900.1 Ankyrin repeat family protein4.9e-5665.09Show/hide
Query:  SLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQN---AEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        S SC  S+  +  S  S  P  L S FLG ++    + P  +GPSNGSR TCWF   +N   AE AGIYGSQSRDDF+RDDVEQYFNYMGMLAVEGTY K
Subjt:  SLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQN---AEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA
        MEALL+ +IHPVDILLMLAA+EGD+PK+EELL+AGA Y VKD DGRTA+DRA +EEI+D IL +S +KA
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCTCTCTTGTACTTCCTCCATTAATCTCACCCCAAGATCCTTCAATTCTCGCCCCCCTTTCAAATTGGGTTCCCATTTTCTTGGCCTTCAGTCCAACCTTCG
ATGGCTCTCACCCGTCTCCATTGGACCCTCCAATGGGTCTAGAGCAACTTGCTGGTTCAATTTAAGGCAAAATGCCGAGGGTGCAGGCATTTATGGCAGCCAGTCCCGAG
ATGATTTCAACAGAGATGATGTTGAGCAGTATTTTAACTATATGGGAATGCTGGCTGTAGAAGGAACATATGACAAAATGGAAGCTCTTTTGAGCCAAGACATTCACCCA
GTGGACATTTTGTTGATGCTGGCTGCCTCTGAAGGAGACAAACCAAAACTTGAGGAGCTATTGAGAGCTGGAGCTAGTTATGATGTGAAAGATGTTGATGGTCGAACTGC
CGTTGATAGAGCAGTTAACGAAGAAATTAAGGATTTTATTCTCAATTTTTCTGCTAAAAAGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCTCTCTTGTACTTCCTCCATTAATCTCACCCCAAGATCCTTCAATTCTCGCCCCCCTTTCAAATTGGGTTCCCATTTTCTTGGCCTTCAGTCCAACCTTCG
ATGGCTCTCACCCGTCTCCATTGGACCCTCCAATGGGTCTAGAGCAACTTGCTGGTTCAATTTAAGGCAAAATGCCGAGGGTGCAGGCATTTATGGCAGCCAGTCCCGAG
ATGATTTCAACAGAGATGATGTTGAGCAGTATTTTAACTATATGGGAATGCTGGCTGTAGAAGGAACATATGACAAAATGGAAGCTCTTTTGAGCCAAGACATTCACCCA
GTGGACATTTTGTTGATGCTGGCTGCCTCTGAAGGAGACAAACCAAAACTTGAGGAGCTATTGAGAGCTGGAGCTAGTTATGATGTGAAAGATGTTGATGGTCGAACTGC
CGTTGATAGAGCAGTTAACGAAGAAATTAAGGATTTTATTCTCAATTTTTCTGCTAAAAAGGCATGA
Protein sequenceShow/hide protein sequence
MASLSCTSSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATCWFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKMEALLSQDIHP
VDILLMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRAVNEEIKDFILNFSAKKA