; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G9206 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9206
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionGlycine-rich RNA-binding protein
Genome locationctg1658:1517734..1520523
RNA-Seq ExpressionCucsat.G9206
SyntenyCucsat.G9206
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]2.20e-142100Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]7.28e-13797.2Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGG---RYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRS
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG RYGGRDDKY GGGGGGGG   RYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRS
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGG---RYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]3.35e-12793.81Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
         RDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGRGG RYGGRDDKYS GGGG G RYGPDRNGDRFGGRNRSSGDRGGSGSDR++RDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRS
        ERR SGGFRS
Subjt:  ERRGSGGFRS

XP_022927772.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita moschata]3.41e-12391.51Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
         RD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGG RYGGRDDKYSGGGGGG GRYGPDRNGDR GGRNR +GDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERR--GSGGFRS
        ERR  GSGGFRS
Subjt:  ERR--GSGGFRS

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]1.37e-13698.11Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG-GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGRGG RYGGRDDKYSGGGGGGG GRYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRSGP
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG-GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP

Query:  YERRGSGGFRSG
        YERRGSGGFRSG
Subjt:  YERRGSGGFRSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein1.07e-142100Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

A0A1S3C164 glycine-rich RNA-binding protein RZ1A3.52e-13797.2Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGG---RYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRS
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG RYGGRDDKY GGGGGGGG   RYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRS
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGG---RYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A1.62e-12793.81Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
         RDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGRGG RYGGRDDKYS GGGG G RYGPDRNGDRFGGRNRSSGDRGGSGSDR++RDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRS
        ERR SGGFRS
Subjt:  ERRGSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like1.65e-12391.51Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
         RD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGG RYGGRDDKYSGGGGGG GRYGPDRNGDR GGRNR +GDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERR--GSGGFRS
        ERR  GSGGFRS
Subjt:  ERR--GSGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like2.43e-12392.02Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG-GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP
         RDHDRDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGG RYGGRDDKYSGGG GGG GRYGPDRNGDR GGRNR +GDRGGSGSDRYSRDRSGP
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG-GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP

Query:  YERR--GSGGFRS
        YERR  GSGGFRS
Subjt:  YERR--GSGGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A4.9e-2645.5Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGRSITV++AQ ++GSG         GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGG----GGGRYGPDRNGDRFGGRNRSSGDRGGSG
                 GG RG   G  ++ G  G +       GG GG   GGR+  YSGGGGG    GGG  G    G R GG     G  GG G
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGG----GGGRYGPDRNGDRFGGRNRSSGDRGGSG

Q03250 Glycine-rich RNA-binding protein 74.2e-2545.98Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGD-----R
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ    G G  H G      R
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGD-----R

Query:  PRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNG
          GG  +    G  +GG  G   G     G  G ++    S GG GG   GGR +   G GGG GG YG    G
Subjt:  PRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNG

Q05966 Glycine-rich RNA-binding protein 101.9e-2544.12Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        EVEYRCF+GGL+W+T D  L+  F +FG ++++K++ D+ +GRSRGFGFVTF ++K+M +AI  MNG +LDGR+ITV++AQ   G G    G    GGR 
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  -----------HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG
                    DR  G  +G   G   G  +  G  G+        G R GG YGG D  Y GG GGGG
Subjt:  -----------HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG

Q99070 Glycine-rich RNA-binding protein 23.2e-2543.01Show/hide
Query:  ADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGG
        A +VEYRCF+GGL+W+T++  L++AF  FG ++++KV+ D+ +GRSRGFGFVTF  +++M +AI+ MNG +LDGR+ITV++AQ   G G           
Subjt:  ADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGG

Query:  RDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDD---KYSGGG-GGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSD
                   GG  G   G        G+  RE    GG GGG YGGR +    Y GGG GGGGG YG    G  +GG     G+RG SG +
Subjt:  RDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDD---KYSGGG-GGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSD

Q9LIN3 Glycine-rich RNA-binding protein RZ1A3.5e-6459.36Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGG-----------------------------RYGGRDDKYS-------------GG
          R +DRDR R  GG  G   GDCFKCGKPGHFARECPSE  R GG                             RYG +DD+YS             G 
Subjt:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGG-----------------------------RYGGRDDKYS-------------GG

Query:  GGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF
          GGG RYGPDR+G+R GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  GGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 23.0e-2645.98Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGD-----R
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ    G G  H G      R
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGD-----R

Query:  PRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNG
          GG  +    G  +GG  G   G     G  G ++    S GG GG   GGR +   G GGG GG YG    G
Subjt:  PRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNG

AT2G21660.2 cold, circadian rhythm, and rna binding 21.2e-2748.47Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGGR
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ    G G  H G    GG 
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGGR

Query:  DHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGGRYGGRDDKYSGGGGGGGG
           R+ G   GG  G   G   + G  G +       GGR  GGG YGG +    GG GGGGG
Subjt:  DHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGGRYGGRDDKYSGGGGGGGG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.5e-6559.36Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGG-----------------------------RYGGRDDKYS-------------GG
          R +DRDR R  GG  G   GDCFKCGKPGHFARECPSE  R GG                             RYG +DD+YS             G 
Subjt:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGG-----------------------------RYGGRDDKYS-------------GG

Query:  GGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF
          GGG RYGPDR+G+R GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  GGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF

AT4G39260.1 cold, circadian rhythm, and RNA binding 15.0e-2644.39Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG         GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPD--RNGDRFGGRNRSSGDRGGSG
                 GG RG + G     G  G+         G GGG Y  R   Y  GGGGGG  YG    R G  +GG +  S   GG G
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPD--RNGDRFGGRNRSSGDRGGSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.8e-2338.53Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA +   R F+GGLS   +DR L+ AF +FG +++ ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G   D +    RG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRD-RGR-DFGGARGS----NSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG--------------GRYGPDR--NGDRFGGRN
        GRD      G+  FGG  G        +CFKCG+ GH+AR+CPS GG  GG  GG   + S  GG  G               RY  DR     R+G R+
Subjt:  GRDHDRD-RGR-DFGGARGS----NSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG--------------GRYGPDR--NGDRFGGRN

Query:  RSSGDRGGSGSDRYSRDRSGPYERRGSGGFR
        R          DRY+ DR      R +GG R
Subjt:  RSSGDRGGSGSDRYSRDRSGPYERRGSGGFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAAAAGTTTGGCCATCTTGTCGAGGCCAA
GGTAGTTGTCGACAAATTTTCTGGACGCTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCTATGAATGGAATGGATTTAG
ATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCTGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTCGTGATCATGATCGTGATCGGGGTCGT
GATTTTGGTGGTGCACGTGGATCTAACAGTGGGGATTGCTTTAAATGTGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTGGTAGGTA
TGGAGGGAGGGATGACAAATATAGTGGTGGCGGCGGCGGTGGTGGCGGTCGATATGGTCCAGACCGAAATGGAGATAGATTCGGTGGGCGCAATAGGAGTTCTGGTGATC
GAGGAGGTTCGGGAAGTGATCGATATAGCCGTGATCGCTCTGGTCCATATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAAAAGTTTGGCCATCTTGTCGAGGCCAA
GGTAGTTGTCGACAAATTTTCTGGACGCTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCTATGAATGGAATGGATTTAG
ATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCTGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTCGTGATCATGATCGTGATCGGGGTCGT
GATTTTGGTGGTGCACGTGGATCTAACAGTGGGGATTGCTTTAAATGTGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTGGTAGGTA
TGGAGGGAGGGATGACAAATATAGTGGTGGCGGCGGCGGTGGTGGCGGTCGATATGGTCCAGACCGAAATGGAGATAGATTCGGTGGGCGCAATAGGAGTTCTGGTGATC
GAGGAGGTTCGGGAAGTGATCGATATAGCCGTGATCGCTCTGGTCCATATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAG
Protein sequenceShow/hide protein sequence
MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRDHDRDRGR
DFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGFRSG