; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G9250 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9250
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionmethylcrotonoyl-CoA carboxylase beta chain, mitochondrial
Genome locationctg1658:5341..5987
RNA-Seq ExpressionCucsat.G9250
SyntenyCucsat.G9250
Gene Ontology termsGO:0006552 - leucine catabolic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:1905202 - methylcrotonoyl-CoA carboxylase complex (cellular component)
GO:0004485 - methylcrotonoyl-CoA carboxylase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136976.1 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Cucumis sativus]2.21e-5598.96Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

XP_016901721.1 PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Cucumis melo]2.84e-5194.79Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSWLS FPQLLL RKREFC AVLPDGVDRSSD FARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

XP_022135841.1 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Momordica charantia]9.05e-4683.33Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSW+S+ PQ+LLP+KREFC+ VLPDGVDRSSD FARNS AMD FIS+LRSHI+K+LAGGGPEAVKRN+SRNKLLPRERID LLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

XP_022927902.1 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Cucurbita moschata]3.37e-4584.38Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSW+S+  Q+L PR+REFC+ VLPDGVDRSSD FARNS AM GFI+ELRSHINKVLAGGGPEAVKRN+SRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

XP_038887940.1 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Benincasa hispida]3.20e-4787.5Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SN  LS+ PQ+LLPRKREFC+ VLPDG+DRSSD FARNS AMDGFISELRSHINKVLAGGGPEA+KRNKSRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

TrEMBL top hitse value%identityAlignment
A0A0A0K4Q8 Uncharacterized protein1.07e-5598.96Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

A0A1S4E0G8 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial1.38e-5194.79Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSWLS FPQLLL RKREFC AVLPDGVDRSSD FARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

A0A5D3C5T0 Methylcrotonoyl-CoA carboxylase beta chain1.38e-5194.79Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSWLS FPQLLL RKREFC AVLPDGVDRSSD FARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

A0A6J1C1W1 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial4.38e-4683.33Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSW+S+ PQ+LLP+KREFC+ VLPDGVDRSSD FARNS AMD FIS+LRSHI+K+LAGGGPEAVKRN+SRNKLLPRERID LLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

A0A6J1EIG8 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial1.63e-4584.38Show/hide
Query:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        SNSW+S+  Q+L PR+REFC+ VLPDGVDRSSD FARNS AM GFI+ELRSHINKVLAGGGPEAVKRN+SRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

SwissProt top hitse value%identityAlignment
P34385 Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial8.9e-1244.3Show/hide
Query:  AVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQVFVGY
        A +   +D SSD+FA N+  M   + +L++ I+K+   GG +AVK ++SR K+L RERID ++D GS F+E SQ+  GY
Subjt:  AVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQVFVGY

Q3ULD5 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial6.4e-1045Show/hide
Query:  IAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQVFVGY
        +A L    D +S  +  N   M   +S+L      V  GG  +A  R+ SR KLLPR+RID L+DPGS FLE SQ F GY
Subjt:  IAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQVFVGY

Q5XIT9 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial1.7e-1041.76Show/hide
Query:  LPRKREF---CIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQVFVGY
        +PR+R +    +A L    D  S  +  N   M   +++L      V  GG  +A  R+ SR KLLPR+RID L+DPGS FLE SQ F GY
Subjt:  LPRKREF---CIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQVFVGY

Q9LDD8 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial1.2e-2976.54Show/hide
Query:  KREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        ++ FC+ +LPDGVDR+S+ F+ NS AM+G +SELRSHI KVLAGGG EAVKRN+SRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  KREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV

Q9V9A7 Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial9.8e-1148.61Show/hide
Query:  VLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELS
        VL   VD+ S  +  N+  M   + +LR+  ++VL GGG +A++R+ SR KLL RERI+ LLD GS FLELS
Subjt:  VLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELS

Arabidopsis top hitse value%identityAlignment
AT4G34030.1 3-methylcrotonyl-CoA carboxylase8.8e-3176.54Show/hide
Query:  KREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV
        ++ FC+ +LPDGVDR+S+ F+ NS AM+G +SELRSHI KVLAGGG EAVKRN+SRNKLLPRERIDRLLDPGSSFLELSQ+
Subjt:  KREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAAATTCATGGTTATCGTTGTTCCCCCAGCTTCTTCTCCCTCGGAAGAGGGAATTTTGCATAGCTGTCCTTCCCGATGGAGTTGATCGGAGCTCCGATAACTTCGCTCG
CAATTCCGGTGCTATGGACGGCTTCATTTCCGAGCTTCGTTCCCACATTAACAAGGTTCTAGCGGGGGGTGGGCCTGAAGCTGTCAAGAGAAATAAGAGTCGGAATAAAC
TGCTTCCAAGAGAAAGGATTGATCGTCTTCTTGATCCTGGCTCTTCCTTCCTCGAGCTTTCTCAGGTTTTTGTTGGTTACCTTGTTAATTGCTGTGATTCTTGTTTTTGG
CAGGAGAACGGCTTAATTTCGTTTTTTCACTTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
TCAAATTCATGGTTATCGTTGTTCCCCCAGCTTCTTCTCCCTCGGAAGAGGGAATTTTGCATAGCTGTCCTTCCCGATGGAGTTGATCGGAGCTCCGATAACTTCGCTCG
CAATTCCGGTGCTATGGACGGCTTCATTTCCGAGCTTCGTTCCCACATTAACAAGGTTCTAGCGGGGGGTGGGCCTGAAGCTGTCAAGAGAAATAAGAGTCGGAATAAAC
TGCTTCCAAGAGAAAGGATTGATCGTCTTCTTGATCCTGGCTCTTCCTTCCTCGAGCTTTCTCAGGTTTTTGTTGGTTACCTTGTTAATTGCTGTGATTCTTGTTTTTGG
CAGGAGAACGGCTTAATTTCGTTTTTTCACTTGTTTTGA
Protein sequenceShow/hide protein sequence
SNSWLSLFPQLLLPRKREFCIAVLPDGVDRSSDNFARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLLPRERIDRLLDPGSSFLELSQVFVGYLVNCCDSCFW
QENGLISFFHLF