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Cucsat.G9282 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9282
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPhotosystem I reaction centre subunit N
Genome locationctg1658:522704..524348
RNA-Seq ExpressionCucsat.G9282
SyntenyCucsat.G9282
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009522 - photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136934.1 uncharacterized protein LOC101214221 [Cucumis sativus]1.04e-7399.22Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDY
        MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDY
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDY

Query:  FEFVEGSVKNKNELSEAEKGIVEWLKRNK
        FEFVEGSVKNKNELSEAEKGIVEWLKR+K
Subjt:  FEFVEGSVKNKNELSEAEKGIVEWLKRNK

XP_008455049.1 PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]2.54e-6794.62Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPAS-AAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
        MSSIGQSILMALAVTLNKFASSNVQSVQRNKATAT  VSSPIGRR LLLST+APAS AAAA+ VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPAS-AAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD

Query:  YFEFVEGSVKNKNELSEAEKGIVEWLKRNK
        YFEFVEGSVKNKNELSEAEKGIVEWLKRNK
Subjt:  YFEFVEGSVKNKNELSEAEKGIVEWLKRNK

XP_022927848.1 uncharacterized protein LOC111434615 [Cucurbita moschata]6.27e-5376.98Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TATATVS------SPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLE
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK     T TAT S      S I RR LLL      SAA A+ VDSRTELLKRYLKKSEENKEKNDKERLE
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TATATVS------SPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLE

Query:  SYYKRNYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK
        S+YKRNYKDYFEFVEGS+KNK+ELSEAEKGI+EWLKRNK
Subjt:  SYYKRNYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK

XP_022989008.1 uncharacterized protein LOC111486201 [Cucurbita maxima]5.60e-5579.1Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKR
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK      TAT + SS I RR LLL      SAA A+ VDSRTELLKRYLKKSEENKEKNDKERLES+YKR
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKR

Query:  NYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK
        NYKDYFEFVEGS+KNK+ELSEAEKGI+EWLKRNK
Subjt:  NYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK

XP_038887440.1 uncharacterized protein LOC120077574 [Benincasa hispida]6.46e-6285.71Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN
        MSSIGQSILMALAVTLNKFASSNVQSVQRN+A    TATAT  S IGRR LLLS +A A+A     VDSRTELLKRYLKKSEENKEKNDKERLESYYKRN
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN

Query:  YKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK
        YKDYFEFVEGSVKNKNELSEAEKGI+EWLKRNK
Subjt:  YKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK

TrEMBL top hitse value%identityAlignment
A0A1S3C176 uncharacterized protein LOC1034953191.23e-6794.62Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPAS-AAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
        MSSIGQSILMALAVTLNKFASSNVQSVQRNKATAT  VSSPIGRR LLLST+APAS AAAA+ VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPAS-AAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD

Query:  YFEFVEGSVKNKNELSEAEKGIVEWLKRNK
        YFEFVEGSVKNKNELSEAEKGIVEWLKRNK
Subjt:  YFEFVEGSVKNKNELSEAEKGIVEWLKRNK

A0A2I4HLI8 uncharacterized protein LOC1090192135.58e-4669.4Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK----ATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN
        MSSIGQSILMAL VT+N+FASSNVQ+V R +    ++ T T +S IGRR LLLSTL     AA    DSRT+LLK+YLKKSEENK KNDKERL+SYYKRN
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK----ATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN

Query:  YKDYFEFVEGSVK-NKNELSEAEKGIVEWLKRNK
        YKDYFEFVEG+ K N+ +LSEAEKGI++WL+RNK
Subjt:  YKDYFEFVEGSVK-NKNELSEAEKGIVEWLKRNK

A0A6J1D574 uncharacterized protein LOC111017388 isoform X11.27e-5278.29Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDY
        MSSIGQSILMALAVT+NKFASSNVQSV RN++ A A  +S IGRR LL S    A AAA + VDSRTELLKRYLKKSE+NKEKNDKERL+SYYKRNYKDY
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDY

Query:  FEFVEGSVKNKNELSEAEKGIVEWLKRNK
        FEFVEGSV+NK+ELSE EK I+EWL+RNK
Subjt:  FEFVEGSVKNKNELSEAEKGIVEWLKRNK

A0A6J1EM63 uncharacterized protein LOC1114346153.03e-5376.98Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TATATVS------SPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLE
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK     T TAT S      S I RR LLL      SAA A+ VDSRTELLKRYLKKSEENKEKNDKERLE
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TATATVS------SPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLE

Query:  SYYKRNYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK
        S+YKRNYKDYFEFVEGS+KNK+ELSEAEKGI+EWLKRNK
Subjt:  SYYKRNYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK

A0A6J1JNZ7 uncharacterized protein LOC1114862012.71e-5579.1Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKR
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK      TAT + SS I RR LLL      SAA A+ VDSRTELLKRYLKKSEENKEKNDKERLES+YKR
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKR

Query:  NYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK
        NYKDYFEFVEGS+KNK+ELSEAEKGI+EWLKRNK
Subjt:  NYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49975.1 INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3.2e-3160.9Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSP--IGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYK
        MSSI QSILMAL VT+NK+ASSNVQ+V+RN     +  + P  +GRR++L S+ +  +AA  S+     +LL++YLKK+EENK KNDKERL+S+YKRNYK
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSP--IGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYK

Query:  DYFEFVEGSVKNKN--ELSEAEKGIVEWLKRNK
        DYFEFVEGS+K K   ELSE+EK I+EWLK NK
Subjt:  DYFEFVEGSVKNKN--ELSEAEKGIVEWLKRNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCATTGGCCAAAGCATTCTCATGGCCTTAGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACCGCCACCGCCAC
CGTCTCTTCACCAATTGGAAGAAGAAGCCTCCTCTTGTCCACCCTTGCCCCCGCCTCCGCCGCCGCCGCCTCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGGTACC
TCAAGAAGTCTGAAGAGAACAAAGAAAAGAATGACAAGGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTTGAGTTTGTCGAAGGATCGGTGAAGAAC
AAGAACGAACTTTCCGAAGCTGAAAAAGGTATTGTTGAGTGGCTTAAACGAAATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCATTGGCCAAAGCATTCTCATGGCCTTAGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACCGCCACCGCCAC
CGTCTCTTCACCAATTGGAAGAAGAAGCCTCCTCTTGTCCACCCTTGCCCCCGCCTCCGCCGCCGCCGCCTCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGGTACC
TCAAGAAGTCTGAAGAGAACAAAGAAAAGAATGACAAGGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTTGAGTTTGTCGAAGGATCGGTGAAGAAC
AAGAACGAACTTTCCGAAGCTGAAAAAGGTATTGTTGAGTGGCTTAAACGAAATAAATGA
Protein sequenceShow/hide protein sequence
MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKN
KNELSEAEKGIVEWLKRNK