; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G940 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G940
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationctg1:5033925..5035550
RNA-Seq ExpressionCucsat.G940
SyntenyCucsat.G940
Gene Ontology termsGO:0009635 - response to herbicide (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009769 - photosynthesis, light harvesting in photosystem II (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009517 - PSII associated light-harvesting complex II (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149296.1 chlorophyll a-b binding protein 13, chloroplastic [Cucumis sativus]4.15e-196100Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

XP_008452292.1 PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo]1.28e-19096.59Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TA +ATLLRATPFLGQ R SPQNPLRD VAMGTGKYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

XP_022929511.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata]7.10e-18895.45Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATA +  LLRATPFLGQ R+SPQNPLRDVVAMGT KYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

XP_022985252.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima]1.01e-18795.45Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATA    LLRATPFLGQ R+SPQNPLRDVVAMGT KYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

XP_023553506.1 chlorophyll a-b binding protein 3, chloroplastic [Cucurbita pepo subsp. pepo]3.11e-18795.8Show/hide
Query:  ATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ATAA+  LLRATPFLGQ R+SPQNPLRDVVAMGT KYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGA GCITPEVLEKWLKVDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

TrEMBL top hitse value%identityAlignment
A0A0A0L6I8 Chlorophyll a-b binding protein, chloroplastic2.01e-196100Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

A0A1S3BUM8 Chlorophyll a-b binding protein, chloroplastic6.19e-19196.59Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TA +ATLLRATPFLGQ R SPQNPLRD VAMGTGKYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

A0A5A7TY25 Chlorophyll a-b binding protein, chloroplastic6.19e-19196.59Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TA +ATLLRATPFLGQ R SPQNPLRD VAMGTGKYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

A0A6J1ENC1 Chlorophyll a-b binding protein, chloroplastic3.44e-18895.45Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATA +  LLRATPFLGQ R+SPQNPLRDVVAMGT KYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

A0A6J1J4D4 Chlorophyll a-b binding protein, chloroplastic4.88e-18895.45Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATA    LLRATPFLGQ R+SPQNPLRDVVAMGT KYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

SwissProt top hitse value%identityAlignment
P12328 Chlorophyll a-b binding protein of LHCII type I, chloroplastic2.2e-10068.94Show/hide
Query:  ATLLRATPFLGQARASPQNPLRDVVAMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        A+ ++++ F GQ     ++ L   V +  G+++M          +WYG DR K+LGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH R
Subjt:  ATLLRATPFLGQARASPQNPLRDVVAMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLA
        WAMLGALGCI PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNLVHAQSILA+   QVVLMGL+EG+R+ G   +GEG D LYPGG  FDPLGLA
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG
        DDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ DPVANNAW +AT F PG
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG

P14278 Chlorophyll a-b binding protein 4, chloroplastic2.6e-10170.99Show/hide
Query:  LRATPFLGQARASPQNP-LRDVVAMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ++ + F+GQA    QN  +R V   G G+ TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Subjt:  LRATPFLGQARASPQNP-LRDVVAMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD
        MLGALGC+ PE+L K   V F E VWFKAGSQIF+EGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FDPLGLADD
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG
        P  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPVANNAW YAT F PG
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG

P27489 Chlorophyll a-b binding protein 13, chloroplastic3.0e-14290.53Show/hide
Query:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATA++ T+++ATPFLGQ + +  NPLRDVVAMG+ ++TMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCI PEVLEKW+KVDFKEPVWFKAGSQIF++GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKF PG+
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic1.9e-13686.57Show/hide
Query:  MAAT---AATATLLRATPFL-GQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        MA+T   AA+  ++  TPFL GQ RA+  +PLRD+ A   G+ TM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEV
Subjt:  MAAT---AATATLLRATPFL-GQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
        IHGRWAMLGALGC+ PEVL+KW+ V+FKEPVWFKAGSQIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
Subjt:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL

Query:  GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLDDPVANNAWV+ATKFAPGS
Subjt:  GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

Q9S7M0 Chlorophyll a-b binding protein 3, chloroplastic3.2e-13987.92Show/hide
Query:  MAAT-AATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MA+T  +++++L  T FLGQ +AS  NPLRDVV++G+ KYTM NDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MAAT-AATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL+KW++VDFKEPVWFKAGSQIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAW +ATKFAPG+
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

Arabidopsis top hitse value%identityAlignment
AT2G05070.1 photosystem II light harvesting complex gene 2.22.3e-10069.08Show/hide
Query:  LRATPFLGQARASPQNPL-RDVVAMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ++ + F GQ    P + L + V  +G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWA
Subjt:  LRATPFLGQARASPQNPL-RDVVAMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD
        MLGALGC  PE+L K   V F E VWFKAGSQIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL LA+D
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG
        P  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL DPVANNAW YAT F PG
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG

AT2G05100.1 photosystem II light harvesting complex gene 2.13.5e-10169.58Show/hide
Query:  LRATPFLGQARASPQNP-LRDVVAMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ++ + F GQ    P N  LR V   G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWA
Subjt:  LRATPFLGQARASPQNP-LRDVVAMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD
        MLGALGC  PE+L K   V F E VWFKAGSQIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL LA+D
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        P  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL DPVANNAW YAT F PG+
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B12.3e-9767.16Show/hide
Query:  ATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTM---------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        A +T+  ++P L   +A   +P    V  GTG+ TM         S   WYG DRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEV
Subjt:  ATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTM---------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP
        IH RWAMLGALGC+ PE+L +   V F E VWFKAGSQIF++GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G   +GE  D LYPGG  FDP
Subjt:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP

Query:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG
        LGLA DP  FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL DHL DPV NNAW +AT F PG
Subjt:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG

AT3G27690.1 photosystem II light harvesting complex gene 2.34.3e-9968.06Show/hide
Query:  LRATPFLGQARASPQNPLRDVV--AMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
        ++ + F GQ    P N L   +  + G G+  M          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RW
Subjt:  LRATPFLGQARASPQNPLRDVV--AMGTGKYTM-------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW

Query:  AMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLAD
        AMLGALGC  PE+L K   V F E VWFKAGSQIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL LA+
Subjt:  AMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG
        DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ DPVANNAW YAT F PG
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG

AT5G54270.1 light-harvesting chlorophyll B-binding protein 32.2e-14087.92Show/hide
Query:  MAAT-AATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MA+T  +++++L  T FLGQ +AS  NPLRDVV++G+ KYTM NDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MAAT-AATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL+KW++VDFKEPVWFKAGSQIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAW +ATKFAPG+
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACTGCCGCCACCGCCACCCTCCTCCGGGCCACCCCTTTTCTCGGCCAGGCCAGAGCCTCTCCTCAAAACCCCCTCAGAGATGTCGTCGCCATGGGAACTGG
AAAATACACCATGAGTAATGATTTGTGGTATGGACCCGATAGAGTTAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCGTACTTGAACGGTGAGTTCCCTGGTGATT
ATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACCGAGCTCTTGAGGTAATCCACGGAAGGTGGGCAATGTTGGGCGCTTTGGGTTGCATA
ACACCCGAAGTCCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTATGGTTCAAGGCAGGATCCCAAATCTTCACAGAAGGAGGTCTAGACTACTTAGGCAACCC
GAACTTGGTCCACGCCCAAAGCATTCTAGCCGTGTTGGGGTTCCAAGTGGTCCTCATGGGTCTAGTAGAAGGGTTCCGCATCAACGGCCTTGATGGCGTCGGCGAGGGCA
ATGACCTGTACCCAGGCGGTCAATACTTTGACCCACTTGGACTGGCTGATGACCCTGTCACCTTCGCTGAGCTGAAGGTGAAGGAGATCAAGAATGGGCGTCTTGCCATG
TTTTCCATGTTTGGATTCTTCGTTCAAGCCATTGTGACCGGAAAGGGTCCTCTTGAGAACCTTCTTGACCACCTTGATGACCCTGTGGCTAACAATGCTTGGGTTTATGC
CACCAAGTTTGCCCCTGGCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCACTGCCGCCACCGCCACCCTCCTCCGGGCCACCCCTTTTCTCGGCCAGGCCAGAGCCTCTCCTCAAAACCCCCTCAGAGATGTCGTCGCCATGGGAACTGG
AAAATACACCATGAGTAATGATTTGTGGTATGGACCCGATAGAGTTAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCGTACTTGAACGGTGAGTTCCCTGGTGATT
ATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACCGAGCTCTTGAGGTAATCCACGGAAGGTGGGCAATGTTGGGCGCTTTGGGTTGCATA
ACACCCGAAGTCCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTATGGTTCAAGGCAGGATCCCAAATCTTCACAGAAGGAGGTCTAGACTACTTAGGCAACCC
GAACTTGGTCCACGCCCAAAGCATTCTAGCCGTGTTGGGGTTCCAAGTGGTCCTCATGGGTCTAGTAGAAGGGTTCCGCATCAACGGCCTTGATGGCGTCGGCGAGGGCA
ATGACCTGTACCCAGGCGGTCAATACTTTGACCCACTTGGACTGGCTGATGACCCTGTCACCTTCGCTGAGCTGAAGGTGAAGGAGATCAAGAATGGGCGTCTTGCCATG
TTTTCCATGTTTGGATTCTTCGTTCAAGCCATTGTGACCGGAAAGGGTCCTCTTGAGAACCTTCTTGACCACCTTGATGACCCTGTGGCTAACAATGCTTGGGTTTATGC
CACCAAGTTTGCCCCTGGCTCATAA
Protein sequenceShow/hide protein sequence
MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCI
TPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAM
FSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS