; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G9437 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9437
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionATP-dependent Clp protease adapter protein CLPS1
Genome locationctg1673:704340..707153
RNA-Seq ExpressionCucsat.G9437
SyntenyCucsat.G9437
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446565.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Cucumis melo]3.78e-9097.83Show/hide
Query:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
        GDRSS+CKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
Subjt:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY

Query:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        NGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

XP_008446566.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Cucumis melo]4.97e-8797.74Show/hide
Query:  VCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSL
        +CKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSL
Subjt:  VCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSL

Query:  VIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        VIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  VIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

XP_011655763.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]3.97e-92100Show/hide
Query:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
        GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
Subjt:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY

Query:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
Subjt:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

XP_038891524.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Benincasa hispida]1.23e-8695.04Show/hide
Query:  LISGDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQE
        L  GDRSSVCKGLC NFGASVVKSA TAGRGGGLLERPVIEKATPGRESEFDLR+SRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQE
Subjt:  LISGDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQE

Query:  AHYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        AH NGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  AHYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

XP_038891525.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Benincasa hispida]4.19e-8796.38Show/hide
Query:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
        GDRSSVCKGLC NFGASVVKSA TAGRGGGLLERPVIEKATPGRESEFDLR+SRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 
Subjt:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY

Query:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        NGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

TrEMBL top hitse value%identityAlignment
A0A0A0KWD9 ClpS domain-containing protein1.92e-92100Show/hide
Query:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
        GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
Subjt:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY

Query:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
Subjt:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

A0A1S3BEV2 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X22.41e-8797.74Show/hide
Query:  VCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSL
        +CKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSL
Subjt:  VCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSL

Query:  VIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        VIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  VIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

A0A1S3BG61 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X11.83e-9097.83Show/hide
Query:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
        GDRSS+CKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
Subjt:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY

Query:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        NGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

A0A5A7STJ9 ATP-dependent Clp protease adapter protein CLPS11.83e-9097.83Show/hide
Query:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
        GDRSS+CKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
Subjt:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY

Query:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        NGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

A0A6J1DBL1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.29e-8390.58Show/hide
Query:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
        GD++ VC+GLC + GA++VKSA TAG+GGGLLERPVIEKATPGRESEFDLRRSRK TPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY
Subjt:  GDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHY

Query:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC
        NGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Subjt:  NGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.3e-2143.08Show/hide
Query:  KGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVI
        +G    F     ++       GG+++ P     T  ++    + RS+K  P Y+V+LHND++NKREYVV+VL+KV+  +T+D+AV  MQEAH  G++LV+
Subjt:  KGLCFNFGASVVKSAATAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVI

Query:  ICAQADAEGHCMQLRGNGLLSSIEPASGGC
         C Q +AE +C  LR NGL S+IEP  GGC
Subjt:  ICAQADAEGHCMQLRGNGLLSSIEPASGGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS3.6e-1959.49Show/hide
Query:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEP
        RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL SSIEP
Subjt:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS3.4e-1443.62Show/hide
Query:  TPGRESEFDL--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEP
        +PG  +  D    R RK +P Y+V+LHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ LVI+C    AE +C  L+  GL SSIEP
Subjt:  TPGRESEFDL--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.7e-1657.53Show/hide
Query:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEGHCMQLRGNGL
        RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL
Subjt:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEGHCMQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.7e-5373.38Show/hide
Query:  SGDRSSVCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA
        SGD+  V KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQVLMKVIPGMT+DNAVNIMQEA
Subjt:  SGDRSSVCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA

Query:  HYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGC
        H NGL++VI+CAQADAE HCMQLRGNGLLSS+EP  GGC
Subjt:  HYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.2e-5473.38Show/hide
Query:  SGDRSSVCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA
        SGD+  V KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQVLMKVIPGMT+DNAVNIMQEA
Subjt:  SGDRSSVCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA

Query:  HYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGC
        H NGL++VI+CAQADAE HCMQLRGNGLLSS+EP  GGC
Subjt:  HYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein4.0e-3455.4Show/hide
Query:  SGDRSSVCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA
        SGD+  V KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQVLMK                 
Subjt:  SGDRSSVCKGLCFNFGASVVKSAATA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA

Query:  HYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGC
                     ADAE HCMQLRGNGLLSS+EP  GGC
Subjt:  HYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATCTCCATTCCGTGTTTCCTCCTCCGTCCCCAAGACCTCCGCTTTTCCCAGTAAAAAAACCAATCACTCCACTTTGCTTGTCCCAACGAAATTTTAAATCTTTAGAAGA
ATCAGACAAATTATTTCCCATCGGAGCTGATTTTCCGTTCCAGATAGATAGGAAAACAAGTCATGGAGATTGCGATTCGTGGGAAATTAGCTCTCTCACCCAATCATGTC
TTCAACCCCAAACCAGTTTAATTTCAGGGGACAGAAGCTCTGTGTGTAAAGGGCTATGCTTTAACTTTGGTGCGTCCGTTGTTAAATCAGCAGCAACAGCAGGAAGAGGA
GGAGGGTTGTTGGAGAGACCTGTTATTGAGAAAGCAACTCCTGGAAGGGAATCTGAGTTTGATTTGAGGAGATCAAGGAAAATGACACCACCATATCGTGTCATTCTGCA
TAATGATGACTTCAATAAACGAGAATACGTAGTTCAAGTCCTCATGAAAGTCATCCCCGGAATGACGCTTGACAATGCAGTTAACATCATGCAAGAAGCTCACTACAATG
GCTTGTCACTGGTGATCATCTGTGCTCAGGCCGATGCTGAAGGACACTGCATGCAACTTAGAGGCAACGGGCTGTTAAGTTCAATTGAGCCTGCTAGTGGTGGATGCTGT
TAA
mRNA sequenceShow/hide mRNA sequence
AATCTCCATTCCGTGTTTCCTCCTCCGTCCCCAAGACCTCCGCTTTTCCCAGTAAAAAAACCAATCACTCCACTTTGCTTGTCCCAACGAAATTTTAAATCTTTAGAAGA
ATCAGACAAATTATTTCCCATCGGAGCTGATTTTCCGTTCCAGATAGATAGGAAAACAAGTCATGGAGATTGCGATTCGTGGGAAATTAGCTCTCTCACCCAATCATGTC
TTCAACCCCAAACCAGTTTAATTTCAGGGGACAGAAGCTCTGTGTGTAAAGGGCTATGCTTTAACTTTGGTGCGTCCGTTGTTAAATCAGCAGCAACAGCAGGAAGAGGA
GGAGGGTTGTTGGAGAGACCTGTTATTGAGAAAGCAACTCCTGGAAGGGAATCTGAGTTTGATTTGAGGAGATCAAGGAAAATGACACCACCATATCGTGTCATTCTGCA
TAATGATGACTTCAATAAACGAGAATACGTAGTTCAAGTCCTCATGAAAGTCATCCCCGGAATGACGCTTGACAATGCAGTTAACATCATGCAAGAAGCTCACTACAATG
GCTTGTCACTGGTGATCATCTGTGCTCAGGCCGATGCTGAAGGACACTGCATGCAACTTAGAGGCAACGGGCTGTTAAGTTCAATTGAGCCTGCTAGTGGTGGATGCTGT
TAA
Protein sequenceShow/hide protein sequence
NLHSVFPPPSPRPPLFPVKKPITPLCLSQRNFKSLEESDKLFPIGADFPFQIDRKTSHGDCDSWEISSLTQSCLQPQTSLISGDRSSVCKGLCFNFGASVVKSAATAGRG
GGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC