CuGenDBv2

Gene ID	Cucsat.G96
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	ctg1:1719523..1721875
RNA-Seq Expression	Cucsat.G96
Synteny	Cucsat.G96
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

2.09e-169

95.17

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Query:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSS-LFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAA
        MSSMALFSPSSHLST SPS HHTTHFSFRPFSSLRTRNPSSSSSS LFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSS-LFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS-GSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS GSGK+
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS-GSGKM

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

1.95e-186

100

Show/hide

Query:  MSSMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAE
        MSSMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAE
Subjt:  MSSMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAE

Query:  EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS
        EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS
Subjt:  EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS

Query:  LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
Subjt:  LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

1.85e-172

95.54

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Query:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSS-LFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAA
        MSSMALFSPSSHLST SPS HHTTHFSFRPFSSLRTRNPSSSSSS LFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSS-LFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS-GSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS GSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS-GSGKM

XP_022965154.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

1.46e-146

84.64

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Query:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAA
        MSSMALFSP S LS+ SPS HH THF  RPFSSLR+RNPSS           ADNGAGISGGS  V+VE  V QKDPEPA    E++ESLA TNGSVAA 
Subjt:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

9.51e-173

95.13

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Query:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAA
        MSSMALFSPSSHLST SPS HH THFSFRPFSSLRTRNPSSSS  LFTIRATADNGAGISGGSA V+VETPVEQKDPEPAK   EEQESLAGTNGSVAAA
Subjt:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEV EVVSKFEDPKW+NGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE SGSGKM
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

9.46e-187

100

Show/hide

Query:  MSSMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAE
        MSSMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAE
Subjt:  MSSMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAE

Query:  EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS
        EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS
Subjt:  EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS

Query:  LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
Subjt:  LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

A0A1S3BLD8 uncharacterized protein LOC103490842

8.95e-173

95.54

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Query:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSS-LFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAA
        MSSMALFSPSSHLST SPS HHTTHFSFRPFSSLRTRNPSSSSSS LFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSS-LFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS-GSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS GSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS-GSGKM

A0A5A7TG76 Uncharacterized protein

1.01e-169

95.17

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Query:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSS-LFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAA
        MSSMALFSPSSHLST SPS HHTTHFSFRPFSSLRTRNPSSSSSS LFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSS-LFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS-GSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS GSGK+
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS-GSGKM

A0A6J1EC24 light-harvesting complex-like protein 3 isotype 1, chloroplastic

4.08e-146

83.9

Show/hide

Query:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAA
        MSSMALFSP S LS+ SPS HH THF  RPFSSLR+RNPSS           ADNGAGISGGS  V+VE+ V QKDPEP     E+QE LA TNGSVAA 
Subjt:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

7.07e-147

84.64

Show/hide

Query:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAA
        MSSMALFSP S LS+ SPS HH THF  RPFSSLR+RNPSS           ADNGAGISGGS  V+VE  V QKDPEPA    E++ESLA TNGSVAA 
Subjt:  MSSMALFSPSSHLSTFSPS-HHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

6.8e-73

57.2

Show/hide

Query:  SMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTI-RATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVA--AA
        SMALFSP    S  +P+             + T   S+   SL ++ RA++DNG      S  V +  P      E    +P E  S A  NG+V   A 
Subjt:  SMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTI-RATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVA--AA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        +   E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS
        SLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  S +
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

7.0e-78

59.26

Show/hide

Query:  MALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETP----VEQKDPEPAKLAPEEQESLAGTNGSVAAA
        MALFSP    S+    +    FSF   SS R        S L   RA++D+G+  +  +A VSVE P    V  K+P  +  A +++E+    N +V   
Subjt:  MALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETP----VEQKDPEPAKLAPEEQESLAGTNGSVAAA

Query:  E-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        E +  E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMAYFV
Subjt:  E-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK
        DSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

5.0e-79

59.26

Show/hide

Query:  MALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETP----VEQKDPEPAKLAPEEQESLAGTNGSVAAA
        MALFSP    S+    +    FSF   SS R        S L   RA++D+G+  +  +A VSVE P    V  K+P  +  A +++E+    N +V   
Subjt:  MALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETP----VEQKDPEPAKLAPEEQESLAGTNGSVAAA

Query:  E-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        E +  E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMAYFV
Subjt:  E-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK
        DSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK

AT5G47110.1 Chlorophyll A-B binding family protein

4.8e-74

57.2

Show/hide

Query:  SMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTI-RATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVA--AA
        SMALFSP    S  +P+             + T   S+   SL ++ RA++DNG      S  V +  P      E    +P E  S A  NG+V   A 
Subjt:  SMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTI-RATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVA--AA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        +   E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS
        SLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  S +
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTTTCTCTCCTTCACACCACACAACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACCAGAAA
CCCTTCTTCTTCTTCTTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATTTCAGGTGGTTCAGCCACTGTTTCTGTAGAAACCCCCGTCGAGCAGA
AGGATCCGGAGCCGGCCAAGCTTGCACCCGAAGAGCAGGAGAGCCTCGCCGGAACCAATGGGTCGGTGGCGGCTGCTGAAGAAGTTGTCGAGGTGGTTAGCAAATTTGAA
GACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGCACTGATTGGGATGCTGTTATTGATGCTGAGGCTAGGAGGAGGAAGTGGTTGGA
AAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATCAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCA
ATGGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTCGATAGCTTGACAGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACATTGCTATTT
GTTGCTGTGGTGGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTACGACAAGCAATGGCAAGCAACTTGGCA
GGATGAAACCTCAGGCTCAGGCAAAATGTAA

mRNA sequence

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Protein sequence

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MSSMALFSPSSHLSTFSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAEEVVEVVSKFE
DPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLF
VAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

Cucsat.G96 (gene) of Cucumber (B10) v3 genome