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Cucsat.G9682 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9682
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrotransposon protein
Genome locationctg1673:5449522..5454390
RNA-Seq ExpressionCucsat.G9682
SyntenyCucsat.G9682
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33754.1 retrotransposon protein [Cucumis melo subsp. melo]1.94e-7761.65Show/hide
Query:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATT-GGDHINYIEASNEWTQWRDDLAQSMF
        MKHSS RNVIER  G+LKGRW ILR KSYYP+QVQCRTI+AC LLHNLIN EMT  + + E+EDEGDS YATT   + I YIE +NEW+QWRDDLA SMF
Subjt:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATT-GGDHINYIEASNEWTQWRDDLAQSMF

Query:  NEWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSG
         +WQ R                        SC ++LVS+ GW+SDNGTFRP YLAQL+RM+AE++ GC++ +TTV++ RIK LKR+FQAIAEM GP CSG
Subjt:  NEWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSG

Query:  FGWNDD
        FGWND+
Subjt:  FGWNDD

ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]1.45e-8163.41Show/hide
Query:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN
        MKH S RNVIER  G+LKGRW ILR KSYYP++VQCRTI+ACCLLHNLIN EMTN D +++N DE DS +ATT  D I+YIE SNEW+QWRD+LA+ +  
Subjt:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN

Query:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF
                M SSSR PKH WT+ EE+ LV CLV+LV+  GWRSDNGTFRP YL QL RM+A ++PG  + ++T+ +SRIKL+KR F A+AEM GP CSGF
Subjt:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF

Query:  GWNDD
        GWND+
Subjt:  GWNDD

KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]9.81e-7760.49Show/hide
Query:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN
        MKHSS RNVIE+  G+LKGRW IL+ KSYYPI+VQCRTI+ACCLLHNLIN EM   D +D+  DE DS +AT+  D I+YIE SNEWT+WRDDL + MF+
Subjt:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN

Query:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF
        EW+ RND MASS R  KH WT+ EE+ LV CLV+LV+  GWRSDNGTFRP                           RIKLLKR F AIAEMCGP CS F
Subjt:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF

Query:  GWNDD
        GWND+
Subjt:  GWNDD

KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]1.60e-7160.22Show/hide
Query:  GRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFNEWQSRNDYMASSSRNPKH
        GRW ILR KSYYP+ VQCRTIMACCLLHNLIN EMTN + +D+  DEGDS YATTGGD INYIE SNEW++ RD LA +MF++W+ R D M SSSR  KH
Subjt:  GRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFNEWQSRNDYMASSSRNPKH

Query:  AWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGFGWND
         WT+ EE+ LV CLV+LVS  GWRS+NGTFR  YLAQL RM+ +++    +  +  ++ R+K LK+   +   M GP CSGFGWN+
Subjt:  AWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGFGWND

XP_031742024.1 uncharacterized protein LOC105435527 [Cucumis sativus]3.05e-15199.51Show/hide
Query:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN
        MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN
Subjt:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN

Query:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF
        EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDN TFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF
Subjt:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF

Query:  GWNDDL
        GWNDDL
Subjt:  GWNDDL

TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein4.75e-7760.49Show/hide
Query:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN
        MKHSS RNVIE+  G+LKGRW IL+ KSYYPI+VQCRTI+ACCLLHNLIN EM   D +D+  DE DS +AT+  D I+YIE SNEWT+WRDDL + MF+
Subjt:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN

Query:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF
        EW+ RND MASS R  KH WT+ EE+ LV CLV+LV+  GWRSDNGTFRP                           RIKLLKR F AIAEMCGP CS F
Subjt:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF

Query:  GWNDD
        GWND+
Subjt:  GWNDD

A0A5A7TJS2 Retrotransposon protein7.74e-7260.22Show/hide
Query:  GRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFNEWQSRNDYMASSSRNPKH
        GRW ILR KSYYP+ VQCRTIMACCLLHNLIN EMTN + +D+  DEGDS YATTGGD INYIE SNEW++ RD LA +MF++W+ R D M SSSR  KH
Subjt:  GRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFNEWQSRNDYMASSSRNPKH

Query:  AWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGFGWND
         WT+ EE+ LV CLV+LVS  GWRS+NGTFR  YLAQL RM+ +++    +  +  ++ R+K LK+   +   M GP CSGFGWN+
Subjt:  AWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGFGWND

A0A5D3D8J6 Retrotransposon protein5.73e-6959.68Show/hide
Query:  GRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFNEWQSRNDYMASSSRNPKH
        GRW ILR KSYYP+ VQCRTIMACCLLHNLIN EMTN + +D+  DEGDS YATTGGD INYIE SNEW++ RD LA +MF++W+ R D M SSSR  KH
Subjt:  GRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFNEWQSRNDYMASSSRNPKH

Query:  AWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGFGWND
         WT+ EE+ LV CLV+LVS  GWRS+NGTFR  YLAQL RM+ +++    +  +  ++ R+K LK+   +   + GP CSGFGWN+
Subjt:  AWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGFGWND

E5GBB2 Retrotransposon protein9.39e-7861.65Show/hide
Query:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATT-GGDHINYIEASNEWTQWRDDLAQSMF
        MKHSS RNVIER  G+LKGRW ILR KSYYP+QVQCRTI+AC LLHNLIN EMT  + + E+EDEGDS YATT   + I YIE +NEW+QWRDDLA SMF
Subjt:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATT-GGDHINYIEASNEWTQWRDDLAQSMF

Query:  NEWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSG
         +WQ R                        SC ++LVS+ GW+SDNGTFRP YLAQL+RM+AE++ GC++ +TTV++ RIK LKR+FQAIAEM GP CSG
Subjt:  NEWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSG

Query:  FGWNDD
        FGWND+
Subjt:  FGWNDD

E5GCB5 Retrotransposon protein7.03e-8263.41Show/hide
Query:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN
        MKH S RNVIER  G+LKGRW ILR KSYYP++VQCRTI+ACCLLHNLIN EMTN D +++N DE DS +ATT  D I+YIE SNEW+QWRD+LA+ +  
Subjt:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFN

Query:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF
                M SSSR PKH WT+ EE+ LV CLV+LV+  GWRSDNGTFRP YL QL RM+A ++PG  + ++T+ +SRIKL+KR F A+AEM GP CSGF
Subjt:  EWQSRNDYMASSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGF

Query:  GWNDD
        GWND+
Subjt:  GWNDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.1e-0728.7Show/hide
Query:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLI--NCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNE------------
        ++H S RNVIER+ G+ K R+ I +    +  + Q   ++ C  LHN +   C     D  DE  +EGD       G+ +N  E  NE            
Subjt:  MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLI--NCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNE------------

Query:  WTQWRDDLAQSMFNE
           WR  +A+ M+ +
Subjt:  WTQWRDDLAQSMFNE

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.3e-0428.07Show/hide
Query:  KHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCE--------MTNVDTLDE-NEDE----GDSNYATTGGDHINYIEASNEWT
        +H      I R  G LK R+ IL     YP+Q Q + ++A C LHN +  E        M   +TL E  ED      +      G +H    E   +  
Subjt:  KHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCE--------MTNVDTLDE-NEDE----GDSNYATTGGDHINYIEASNEWT

Query:  QWRDDLAQSMFNEW
        + RD++A  ++N +
Subjt:  QWRDDLAQSMFNEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACACTCGTCTACACGTAACGTTATCGAACGAGTGATTGGTCTTCTGAAGGGTCGTTGGGTAATACTTCGCGAAAAGTCGTACTACCCCATTCAGGTTCAGTGTCG
CACTATTATGGCTTGTTGTCTACTCCACAATCTAATAAATTGTGAGATGACAAATGTCGACACGCTAGACGAGAACGAGGACGAGGGTGACTCGAACTATGCAACGACTG
GAGGTGACCACATCAACTACATTGAGGCGTCAAACGAATGGACTCAATGGAGGGATGACCTCGCACAGTCGATGTTCAACGAATGGCAGTCGCGAAACGACTACATGGCC
AGTTCATCGAGAAACCCAAAGCACGCATGGACGAGAGCAGAGGAGTCATGCCTCGTCAGTTGTCTTGTCGATCTTGTCTCCGTAGAAGGGTGGAGATCAGACAACGGCAC
CTTTCGACCTAGCTACCTCGCGCAGTTGCTGAGAATGCTAGCTGAGAGGATGCCAGGGTGCAAATTGACATCCACTACCGTTGTAGAAAGCAGAATAAAGTTATTGAAAC
GATCATTCCAGGCAATTGCAGAGATGTGTGGTCCTGTATGCAGTGGGTTCGGGTGGAATGACGACCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACACTCGTCTACACGTAACGTTATCGAACGAGTGATTGGTCTTCTGAAGGGTCGTTGGGTAATACTTCGCGAAAAGTCGTACTACCCCATTCAGGTTCAGTGTCG
CACTATTATGGCTTGTTGTCTACTCCACAATCTAATAAATTGTGAGATGACAAATGTCGACACGCTAGACGAGAACGAGGACGAGGGTGACTCGAACTATGCAACGACTG
GAGGTGACCACATCAACTACATTGAGGCGTCAAACGAATGGACTCAATGGAGGGATGACCTCGCACAGTCGATGTTCAACGAATGGCAGTCGCGAAACGACTACATGGCC
AGTTCATCGAGAAACCCAAAGCACGCATGGACGAGAGCAGAGGAGTCATGCCTCGTCAGTTGTCTTGTCGATCTTGTCTCCGTAGAAGGGTGGAGATCAGACAACGGCAC
CTTTCGACCTAGCTACCTCGCGCAGTTGCTGAGAATGCTAGCTGAGAGGATGCCAGGGTGCAAATTGACATCCACTACCGTTGTAGAAAGCAGAATAAAGTTATTGAAAC
GATCATTCCAGGCAATTGCAGAGATGTGTGGTCCTGTATGCAGTGGGTTCGGGTGGAATGACGACCTTTAG
Protein sequenceShow/hide protein sequence
MKHSSTRNVIERVIGLLKGRWVILREKSYYPIQVQCRTIMACCLLHNLINCEMTNVDTLDENEDEGDSNYATTGGDHINYIEASNEWTQWRDDLAQSMFNEWQSRNDYMA
SSSRNPKHAWTRAEESCLVSCLVDLVSVEGWRSDNGTFRPSYLAQLLRMLAERMPGCKLTSTTVVESRIKLLKRSFQAIAEMCGPVCSGFGWNDDL