; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G9702 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9702
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionpre-rRNA-processing protein ESF2
Genome locationctg1673:5911468..5919662
RNA-Seq ExpressionCucsat.G9702
SyntenyCucsat.G9702
Gene Ontology termsGO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0034462 - small-subunit processome assembly (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034353 - ABT1/ESF2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039119 - ABT1/Esf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037601.1 pre-rRNA-processing protein ESF2 [Cucumis melo var. makuwa]4.50e-19192.35Show/hide
Query:  QLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK
        +LGESN+N+DSDKVKKKKK   RKKSTQQR+EES IKDEAGEYENR ETFMKEASPVSNSGSE FFEKR IALEDAENERTD+ILRENSD KILESDNGK
Subjt:  QLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK

Query:  -NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEP
         ++RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEP
Subjt:  -NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEP

Query:  IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIR
        IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIR
Subjt:  IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIR

Query:  SFPQTQPVADFAVQNKPRLSTNVLAGV
        SFPQTQPVAD AVQNK RLSTNVLA V
Subjt:  SFPQTQPVADFAVQNKPRLSTNVLAGV

XP_016902333.1 PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo]1.91e-22891.6Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        MS EESSEVNL TDC+PES KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+N+DSDKVKKKKK   RKKSTQQR+EES IKDEAGEYENR ETF
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQ
        MKEASPVSNSGSE FFEKR IALEDAENERTD+ILRE SD KILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQ
Subjt:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQ

Query:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
        RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
Subjt:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK

Query:  RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        RERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD AVQNK RLSTNVLA VFGSS
Subjt:  RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

XP_022990094.1 pre-rRNA-processing protein ESF2 [Cucurbita maxima]1.67e-18978.33Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        M  EES EV+L TDCSPES KK  K  K K+KQLL++GVDVME    GSV+LGESN+N++       K KKKR+KST+Q V E+ I+ EAGEYE +AE  
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEI--FFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGE
        +KE SP+S+ GSE     E+R+ ALED ENE  DSI+RE S  KILES+NGK +QR IKRKK+LLKE ANADMRGICYLSRVPPHMDPLKLRQILSQ+GE
Subjt:  MKEASPVSNSGSEI--FFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGE

Query:  IQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISA
        IQRIYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISA
Subjt:  IQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISA

Query:  AKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        AKRERDFYL+KVDKSRAL SIEERLKKKQK+REDSEMNS L DSQKLPKLIR+FPQTQPVAD AVQ+KP+LSTN LAGVFGSS
Subjt:  AKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

XP_031742023.1 pre-rRNA-processing protein ESF2 [Cucumis sativus]8.57e-258100Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
        MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
Subjt:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

XP_038891142.1 pre-rRNA-processing protein ESF2 [Benincasa hispida]2.46e-21586.61Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        MS EES EV+L TDCSP+S KKRAK RKNK KQLL++  D+MEMK+VGSVQLGESN+N DSDKVKKKKK   RKKS QQ VEES +KDEAGEYENRAETF
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQ
        MKE S  SN GSE FFEKRKIALEDAENER+ SI+RENS  KILES+NGK +QR IKRKK+LLKE  NADMRGICYLSRVPPHMDPLKLRQILSQ+GEIQ
Subjt:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQ

Query:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
        RIYLAPEDAASQVQRKR+GGFRGQFFSEGWVEFTDKRVAK+VAN+LNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
Subjt:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK

Query:  RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        RERDFYLAKVDKSRALNSIEERLKKKQK+REDSEM STL DSQKLPKLIRSFPQTQPVAD  VQNK RLSTNVLAGVFGSS
Subjt:  RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

TrEMBL top hitse value%identityAlignment
A0A0A0KUC2 RRM domain-containing protein4.15e-258100Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
        MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR
Subjt:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQR

Query:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
Subjt:  IYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
Subjt:  ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

A0A1S4E282 pre-rRNA-processing protein ESF29.26e-22991.6Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        MS EESSEVNL TDC+PES KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+N+DSDKVKKKKK   RKKSTQQR+EES IKDEAGEYENR ETF
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQ
        MKEASPVSNSGSE FFEKR IALEDAENERTD+ILRE SD KILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQ
Subjt:  MKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQ

Query:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
        RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
Subjt:  RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK

Query:  RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        RERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD AVQNK RLSTNVLA VFGSS
Subjt:  RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

A0A5A7T7P5 Pre-rRNA-processing protein ESF22.18e-19192.35Show/hide
Query:  QLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK
        +LGESN+N+DSDKVKKKKK   RKKSTQQR+EES IKDEAGEYENR ETFMKEASPVSNSGSE FFEKR IALEDAENERTD+ILRENSD KILESDNGK
Subjt:  QLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGK

Query:  -NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEP
         ++RKIKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEP
Subjt:  -NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEP

Query:  IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIR
        IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIR
Subjt:  IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIR

Query:  SFPQTQPVADFAVQNKPRLSTNVLAGV
        SFPQTQPVAD AVQNK RLSTNVLA V
Subjt:  SFPQTQPVADFAVQNKPRLSTNVLAGV

A0A6J1BYG4 pre-rRNA-processing protein ESF24.93e-18777.49Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        M  EE  EVNL TD SPES KKRAK  KNK+KQLL +GVDVM+MK+V SVQ+ ESN+N+D DKVKKKKK    KKS +Q VEE+ IK EAGE E++AE+ 
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSE--IFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEI
        MKE  P S+ G E    FEK++I LE AE+ R DSI+RENS  KILES+NGK+ ++IKRKK+LLKE+A A+M GICYLSRVPPHMDPLKLRQILS +GEI
Subjt:  MKEASPVSNSGSE--IFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEI

Query:  QRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA
        QRIYLAPEDAA+QVQRKRAGGFRGQ FSEGWVEFTDKRVAK+VA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA
Subjt:  QRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA

Query:  KRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        KRERDFYL+KVDKSRALNSIEERLKKKQK+REDSEM+S     QKLPKLIR+FPQTQPVAD AV+NK RLS N+LAGVFGSS
Subjt:  KRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

A0A6J1JP68 pre-rRNA-processing protein ESF28.10e-19078.33Show/hide
Query:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF
        M  EES EV+L TDCSPES KK  K  K K+KQLL++GVDVME    GSV+LGESN+N++       K KKKR+KST+Q V E+ I+ EAGEYE +AE  
Subjt:  MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETF

Query:  MKEASPVSNSGSEI--FFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGE
        +KE SP+S+ GSE     E+R+ ALED ENE  DSI+RE S  KILES+NGK +QR IKRKK+LLKE ANADMRGICYLSRVPPHMDPLKLRQILSQ+GE
Subjt:  MKEASPVSNSGSEI--FFEKRKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGE

Query:  IQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISA
        IQRIYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISA
Subjt:  IQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISA

Query:  AKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        AKRERDFYL+KVDKSRAL SIEERLKKKQK+REDSEMNS L DSQKLPKLIR+FPQTQPVAD AVQ+KP+LSTN LAGVFGSS
Subjt:  AKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

SwissProt top hitse value%identityAlignment
O74362 Pre-rRNA-processing protein esf21.6e-3638.26Show/hide
Query:  ENERTDSILRENSDGKILESDNGKNQRKIKR--KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF
        E+E +D           L+ +  KN   IK+   +++ K+       G+ YLSR+PP+M P KLRQILSQ+G+I R+YL PE +A + QR R GG +   
Subjt:  ENERTDSILRENSDGKILESDNGKNQRKIKR--KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF

Query:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK
        + EGW+EF  KRVAK VA +LN   IGG+K S ++ D+WN+KYL KFKW  LTE+ A ++A RE +L +EI   +++   Y+  V+ ++ +  I ++  +
Subjt:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK

Query:  KQKMR---EDSEMNSTLDDSQKLPKLIRSF
        +  +    E  E    L +  K  K  R F
Subjt:  KQKMR---EDSEMNSTLDDSQKLPKLIRSF

Q4HZ47 Pre-rRNA-processing protein ESF22.1e-3331.33Show/hide
Query:  VQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEK--RKIALEDAENERTDSILRENSDGKILESD
        +++ +S+ ++D     ++   +K  +  ++R  ES  +D+ G             S + +   +   EK  +K   ED + ++ +   R++ D     S 
Subjt:  VQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEK--RKIALEDAENERTDSILRENSDGKILESD

Query:  NGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNG
           +  +   KK L+   A     G+ YLSR+PP M P KLR +L  +G I RI+LAPED AS  +R RAGG + + ++EGWVEFT K+ AK V ++LN 
Subjt:  NGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNG

Query:  EPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKL
          IGG+K S ++ DLWN+ YL  FKW +LTE+ A ++A R  ++  EIS + +E   ++  V+K++ L+ +  + K K++    +E ++   + + + ++
Subjt:  EPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKL

Query:  IRSFPQTQPVADFAV--QNKPRLSTNVLAGVF
         RSF Q  P+A   +  +++P   T VL+ +F
Subjt:  IRSFPQTQPVADFAV--QNKPRLSTNVLAGVF

Q59YL9 Pre-rRNA-processing protein ESF21.4e-3235.28Show/hide
Query:  NTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALED-AENERTDSILRENSDGKI-LESDNG-KNQRK
        N   DKV   K K            E F +DE    E++ E    +       G   F        ED A +E ++  + ++ DG   L  D G K  +K
Subjt:  NTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALED-AENERTDSILRENSDGKI-LESDNG-KNQRK

Query:  IKR--KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGG
        +K+   K+L KE       G+CYLSRVPP+M P KLR +LS+ GEI R++L PED +   +R + GG + + F+EGW+EF +K  AK  A  LNG  +GG
Subjt:  IKR--KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGG

Query:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFP
        +K S +Y D+ NIKYL  FKW DLT++ A ++ +R+ KLA+EIS  ++    +++ V+KS+ + +I+    KK+K  +D   N   D  Q+     RS  
Subjt:  RKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFP

Query:  QTQPVADFAVQNKPRLSTN-VLAGVF
        +     D   ++KP    N +L+ VF
Subjt:  QTQPVADFAVQNKPRLSTN-VLAGVF

Q6BSS5 Pre-rRNA-processing protein ESF27.1e-3733.33Show/hide
Query:  ESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKK----QLLKEAANADMRGICYLSR
        + F  DE  + + +     K+AS + N  +E   ++  +  ED +      I+ E +       +N K  + I  KK    QL KE       G+CYLS+
Subjt:  ESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKK----QLLKEAANADMRGICYLSR

Query:  VPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTE
        +PP+M P KLR +LS+ G+I R++L PED ++  +R + GG + + ++ GWVEF +K+ AK  A  LNG  +GG+K S +Y D+ NIKYLS FKW DLT+
Subjt:  VPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTE

Query:  ETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKL-IRSFPQTQPVADFAVQNKPRLS---TNVLA
        + A ++ IR+ KL++E+S  ++    ++  V+KS+ +N+++   K+K +  E    NS  ++S     L  R    T+  A+  +++K + +    +VL+
Subjt:  ETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKL-IRSFPQTQPVADFAVQNKPRLS---TNVLA

Query:  GVF
         VF
Subjt:  GVF

Q6CFT1 Pre-rRNA-processing protein ESF21.1e-3233.33Show/hide
Query:  KKKKKKKRKKSTQQRVEESFI---KDEAGEYENR-AETFMKEASPVSNSGSEIFFE---KRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRK
        K       ++  +  V+  F+    D  GE E    +   +E    S   ++ FFE   K     ++ E+E  +    E  + K +++ + K + K   K
Subjt:  KKKKKKKRKKSTQQRVEESFI---KDEAGEYENR-AETFMKEASPVSNSGSEIFFE---KRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRK

Query:  KQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSF
        +++ K        G+ Y SR+PP MDP KLR +L + G + RIYL PED  +Q  R R GG R   ++EGW EFT KR AK  A+ LNG  IGG+K S  
Subjt:  KQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSF

Query:  YYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVA
        Y D+ N KYL KFKW DL+E+ A +   R+ +L  EIS A RE   Y+  ++KS+A         ++++ R++ E   T +   K  K+ R F Q +  +
Subjt:  YYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVA

Query:  DFAVQNKPRLSTNVLAGVFGS
          A + K  L  +V   + GS
Subjt:  DFAVQNKPRLSTNVLAGVFGS

Arabidopsis top hitse value%identityAlignment
AT3G56510.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-7758.2Show/hide
Query:  DAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF
        +  +E TD I  E    + ++S     ++K K K++LLKEA+ AD RG+CYLSR+PPHMD ++LR IL+Q+GE+ RIYLAPED+ +QV RKRAGGFRGQ 
Subjt:  DAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF

Query:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK
        FSEGWVEF  K VAKRVA+MLNGE IGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I+ R++K
Subjt:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK

Query:  KQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        K+K++E+S  N+        P+ I  F Q + + +   Q+KP LST+ LA VFG S
Subjt:  KQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS

AT3G56510.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-7758.2Show/hide
Query:  DAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF
        +  +E TD I  E    + ++S     ++K K K++LLKEA+ AD RG+CYLSR+PPHMD ++LR IL+Q+GE+ RIYLAPED+ +QV RKRAGGFRGQ 
Subjt:  DAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQF

Query:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK
        FSEGWVEF  K VAKRVA+MLNGE IGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I+ R++K
Subjt:  FSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKK

Query:  KQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
        K+K++E+S  N+        P+ I  F Q + + +   Q+KP LST+ LA VFG S
Subjt:  KQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATCAAGTTTCGACGTTAGACTTGAATTCTTGGAAGAGATTGAGCCGCTGCCCAGCTGATAGCGAACTCGAAATTGGGCATTTAGATAAATTTTTGATGTCCAATGAGGA
GAGTTCTGAAGTTAATTTAAAAACTGACTGCAGCCCAGAATCTAGAAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAGGAAACAGTTATTGATAAAAGGTGTAGATGTCA
TGGAAATGAAAGATGTAGGATCTGTTCAGCTGGGTGAAAGCAACATGAACACTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAAGAAAAAGAGAAAGAAGAGTACTCAA
CAACGTGTAGAGGAGAGCTTTATCAAGGATGAGGCTGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAATTTT
TTTCGAGAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGACAGTATACTTAGAGAAAACTCTGATGGGAAGATTCTGGAGTCTGACAATGGAAAAAATC
AAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCTAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCACACATGGATCCTTTGAAACTT
CGTCAGATCCTCTCACAACATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTT
TTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAGGGTGGCTAATATGTTAAATGGCGAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATC
TCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCC
AAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGACTAAAGAAGAAGCAGAAGATGAGAGAAGATTCAGAGATGAA
TTCTACACTTGATGATAGTCAGAAACTTCCAAAGTTGATCCGCAGCTTTCCACAAACACAACCAGTTGCAGATTTTGCCGTACAAAACAAACCGAGACTATCTACAAATG
TCTTGGCTGGGGTGTTTGGAAGCTCCTAG
mRNA sequenceShow/hide mRNA sequence
CATCAAGTTTCGACGTTAGACTTGAATTCTTGGAAGAGATTGAGCCGCTGCCCAGCTGATAGCGAACTCGAAATTGGGCATTTAGATAAATTTTTGATGTCCAATGAGGA
GAGTTCTGAAGTTAATTTAAAAACTGACTGCAGCCCAGAATCTAGAAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAGGAAACAGTTATTGATAAAAGGTGTAGATGTCA
TGGAAATGAAAGATGTAGGATCTGTTCAGCTGGGTGAAAGCAACATGAACACTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAAGAAAAAGAGAAAGAAGAGTACTCAA
CAACGTGTAGAGGAGAGCTTTATCAAGGATGAGGCTGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAATTTT
TTTCGAGAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGACAGTATACTTAGAGAAAACTCTGATGGGAAGATTCTGGAGTCTGACAATGGAAAAAATC
AAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCTAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCACACATGGATCCTTTGAAACTT
CGTCAGATCCTCTCACAACATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTT
TTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAGGGTGGCTAATATGTTAAATGGCGAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATC
TCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCC
AAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGACTAAAGAAGAAGCAGAAGATGAGAGAAGATTCAGAGATGAA
TTCTACACTTGATGATAGTCAGAAACTTCCAAAGTTGATCCGCAGCTTTCCACAAACACAACCAGTTGCAGATTTTGCCGTACAAAACAAACCGAGACTATCTACAAATG
TCTTGGCTGGGGTGTTTGGAAGCTCCTAG
Protein sequenceShow/hide protein sequence
HQVSTLDLNSWKRLSRCPADSELEIGHLDKFLMSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQ
QRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKL
RQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA
KRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS