CuGenDBv2

Gene ID	Cucsat.G9762
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Reticulon domain-containing protein
Genome location	ctg1673:7223626..7226762
RNA-Seq Expression	Cucsat.G9762
Synteny	Cucsat.G9762
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR003388 - Reticulon IPR044177 - Reticulon-like protein B22/B23

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040534.1 reticulon-like protein B23 isoform X1 [Cucumis melo var. makuwa]

1.37e-97

84.41

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSRHVVKHCS
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG                   H  ++  F+RHVVKHCS
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSRHVVKHCS

XP_008465702.1 PREDICTED: reticulon-like protein B23 isoform X1 [Cucumis melo]

2.12e-94

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG

XP_008465703.1 PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]

6.88e-96

86.03

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L           + PF R
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR

XP_011655303.1 reticulon-like protein B22 [Cucumis sativus]

3.70e-98

95.09

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Query:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
        MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
Subjt:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA

Query:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL
        WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Subjt:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL

XP_038889154.1 reticulon-like protein B22 [Benincasa hispida]

2.19e-92

82.12

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIG R EGLR+T+MA+R+INCKTEVGKPFVALICGSL+YYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSM+AW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L           + PF R
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQM7 Reticulon domain-containing protein

1.79e-98

95.09

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Query:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
        MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA
Subjt:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIA

Query:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL
        WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Subjt:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL

A0A1S3CPH6 reticulon-like protein B22 isoform X2

3.33e-96

86.03

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L           + PF R
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR

A0A1S3CQY5 reticulon-like protein B23 isoform X1

1.03e-94

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG

A0A5D3C5B3 Reticulon-like protein B23 isoform X1

6.65e-98

84.41

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSRHVVKHCS
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG                   H  ++  F+RHVVKHCS
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSRHVVKHCS

A0A6J1I734 reticulon-like protein B22 isoform X1

1.36e-88

79.89

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW
        M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTG+  L  C+Y  L           + PF R
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR

SwissProt top hits

e value

%identity

Alignment

P0C941 Reticulon-like protein B23

1.8e-46

74.6

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Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQ+SQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGM
        KVV+CLY L+ LGR++SGVT+AY G+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGM

Q8GWH5 Reticulon-like protein B22

6.6e-49

77.78

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Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQ+SQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGM
        KVV+CLY LS LGRL+SGVTVAY G+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGM

Arabidopsis top hits

e value

%identity

Alignment

AT1G16825.1 Reticulon family protein

1.3e-47

74.6

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Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQ+SQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGM
        KVV+CLY L+ LGR++SGVT+AY G+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGM

AT1G78895.1 Reticulon family protein

4.7e-50

77.78

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Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQ+SQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGM
        KVV+CLY LS LGRL+SGVTVAY G+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGM

Sequences

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CDS sequence

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ATGATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACGCAAATGGCGAGTCGATCAATCAACTGCAAGACAGAAGTTGGCAAACCCTTTGTTGCGCTCATTTG
CGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCT
TCCGCCATATGAATGTCTCGGTTCCAGTAGACCCTCTTGAGTGGCAAGTATCGCAGGATACTGCTAATAGTATGATCGCTTGGTTAGCCAATACCATTGGTGCGGCTGAG
TCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCGGGTGTTACAGT
TGCCTATACTGGTATGTCTGGCCTTCCTAATTGTCTCTACTTTTTTCTATCTTACAAGGTAATAAATATGCATGATGTTTTGGTAGGACCTTTTTCTCGTCATGTGGTGA
AGCATTGCAGTTTAATTTGTTTTACCAATCTGATTTGTAGCGCTTAG

mRNA sequence

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Protein sequence

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MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAE
SVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSRHVVKHCSLICFTNLICSA

Cucsat.G9762 (gene) of Cucumber (B10) v3 genome