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Cucsat.G9807 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G9807
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionReverse transcriptase domain-containing protein
Genome locationctg1673:6886441..6888791
RNA-Seq ExpressionCucsat.G9807
SyntenyCucsat.G9807
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041990.1 uncharacterized protein E6C27_scaffold67G004320 [Cucumis melo var. makuwa]2.42e-4148.12Show/hide
Query:  KVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPIN
        +V+W+KSAL GVN+ ED L  +  ++G  A+ +P  Y+GLPLGGY R+  FWQP+I+ + +K++RW+  N+S+ GR  LC+++ A+ PTYY+S F+IP N
Subjt:  KVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPIN

Query:  IASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL
        +A SLE++ RNFFWE +  SK+N LVKW      +LV       GGLGL  L+  N ALL
Subjt:  IASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL

KAA0047825.1 uncharacterized protein E6C27_scaffold133G00790 [Cucumis melo var. makuwa]6.06e-4262.7Show/hide
Query:  MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYM
        MVL+AE  K+   KSAL GVNV+EDELK +  KMGCS + MPFLYLGLPLGG   +  F    + K + K+ +WRRFNLS+ GRATLCQS     P  +M
Subjt:  MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYM

Query:  SLFAIPINIASSLERLMRNFFWEQHT
        SLFAIP+N+ASSLERLMRNFFWE HT
Subjt:  SLFAIPINIASSLERLMRNFFWEQHT

KAA0051398.1 Integrase, catalytic core [Cucumis melo var. makuwa]6.82e-4045.96Show/hide
Query:  QKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPI
        +K+NWEKSA+  VN+E+ +  +    + C  + +P LY GLPLGGY +   FWQP+++K Q+K+H W+R NLS+ GR TLC SV +N PTY+MS F +P 
Subjt:  QKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPI

Query:  NIASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL
         +++S E  MRNF  E +  SK+NHLVK   V ++          GGLGL  L+ +NMA L
Subjt:  NIASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL

TYK14626.1 uncharacterized protein E5676_scaffold1275G00180 [Cucumis melo var. makuwa]1.00e-4061.9Show/hide
Query:  MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYM
        MVL+AE  K+   KSAL GVNV+EDELK +  KMGCS + MPFLYLGLPLGG   +  F    + K + K+ +WRRFNLS+ GRATLCQ      P  +M
Subjt:  MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYM

Query:  SLFAIPINIASSLERLMRNFFWEQHT
        SLFAIP+N+ASSLERLMRNFFWE HT
Subjt:  SLFAIPINIASSLERLMRNFFWEQHT

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]1.64e-5653.09Show/hide
Query:  TQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIP
        +QKVNWEKSA+ G+N+EE+++ ++  ++ C  K +P +YLGLPLGGY +  +FWQP+I+K+Q K+ +WRRFNLS+ G+ATLC+SV +NLPTYY+SLF +P
Subjt:  TQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIP

Query:  INIASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL
          +   +ER M+NFFWE H   KINHLVKW  V +       A   GGLGLG L+ +N+A L
Subjt:  INIASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL

TrEMBL top hitse value%identityAlignment
A0A5A7TLN3 Transposon Tf2-9 polyprotein3.39e-3959.46Show/hide
Query:  KVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPIN
        KVNW+KS L GVN+ +DEL +M GK+ C  + +PFLYLGL LGGY RQ  FW+PMI+++ +K+ RW+ FN+S+ GR TLC S+ AN PTYY+S+FAIP N
Subjt:  KVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPIN

Query:  IASSLERLMRN
        +AS+L++LMRN
Subjt:  IASSLERLMRN

A0A5A7U2D4 Uncharacterized protein2.93e-4262.7Show/hide
Query:  MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYM
        MVL+AE  K+   KSAL GVNV+EDELK +  KMGCS + MPFLYLGLPLGG   +  F    + K + K+ +WRRFNLS+ GRATLCQS     P  +M
Subjt:  MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYM

Query:  SLFAIPINIASSLERLMRNFFWEQHT
        SLFAIP+N+ASSLERLMRNFFWE HT
Subjt:  SLFAIPINIASSLERLMRNFFWEQHT

A0A5A7U808 Integrase, catalytic core3.30e-4045.96Show/hide
Query:  QKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPI
        +K+NWEKSA+  VN+E+ +  +    + C  + +P LY GLPLGGY +   FWQP+++K Q+K+H W+R NLS+ GR TLC SV +N PTY+MS F +P 
Subjt:  QKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPI

Query:  NIASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL
         +++S E  MRNF  E +  SK+NHLVK   V ++          GGLGL  L+ +NMA L
Subjt:  NIASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL

A0A5D3CW32 Uncharacterized protein4.86e-4161.9Show/hide
Query:  MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYM
        MVL+AE  K+   KSAL GVNV+EDELK +  KMGCS + MPFLYLGLPLGG   +  F    + K + K+ +WRRFNLS+ GRATLCQ      P  +M
Subjt:  MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYM

Query:  SLFAIPINIASSLERLMRNFFWEQHT
        SLFAIP+N+ASSLERLMRNFFWE HT
Subjt:  SLFAIPINIASSLERLMRNFFWEQHT

A0A5D3D2G4 Uncharacterized protein1.17e-4148.12Show/hide
Query:  KVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPIN
        +V+W+KSAL GVN+ ED L  +  ++G  A+ +P  Y+GLPLGGY R+  FWQP+I+ + +K++RW+  N+S+ GR  LC+++ A+ PTYY+S F+IP N
Subjt:  KVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPIN

Query:  IASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL
        +A SLE++ RNFFWE +  SK+N LVKW      +LV       GGLGL  L+  N ALL
Subjt:  IASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657508.2e-1133.96Show/hide
Query:  MIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPINIASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQN
        ++E++  ++  WR   LS  GR TL ++V +++P + MS   +P +I + L++L R F W      K  HLVKW+KV        +    GGLG+ A ++
Subjt:  MIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPINIASSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQN

Query:  KNMALL
         N AL+
Subjt:  KNMALL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTCCAAGCAGAGACACAGAAGGTTAATTGGGAGAAATCAGCCTTATATGGAGTTAATGTGGAAGAGGATGAGCTGAAAAATATGCCTGGGAAAATGGGATGTTC
TGCAAAAATGATGCCCTTCTTATACTTAGGGCTTCCATTGGGAGGGTATTCAAGACAGTGTACTTTTTGGCAGCCCATGATTGAGAAAATGCAGAGAAAAATACACAGAT
GGAGAAGATTCAACTTGTCACAAGAAGGTAGAGCTACTTTATGTCAATCCGTATTTGCTAATCTTCCTACATATTACATGTCTCTGTTTGCAATTCCGATTAATATAGCA
TCTTCTTTGGAGAGATTAATGAGGAATTTTTTCTGGGAGCAGCACACAAGAAGTAAAATTAACCATTTGGTTAAATGGGCCAAAGTTATCCGAAACCATTTGGTTAAATG
GGCCGCCCCAACTTGTGGAGGTTTGGGCTTGGGAGCATTGCAAAATAAGAACATGGCTCTACTTCCAAGCGGGGCTGGAGGTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTCCAAGCAGAGACACAGAAGGTTAATTGGGAGAAATCAGCCTTATATGGAGTTAATGTGGAAGAGGATGAGCTGAAAAATATGCCTGGGAAAATGGGATGTTC
TGCAAAAATGATGCCCTTCTTATACTTAGGGCTTCCATTGGGAGGGTATTCAAGACAGTGTACTTTTTGGCAGCCCATGATTGAGAAAATGCAGAGAAAAATACACAGAT
GGAGAAGATTCAACTTGTCACAAGAAGGTAGAGCTACTTTATGTCAATCCGTATTTGCTAATCTTCCTACATATTACATGTCTCTGTTTGCAATTCCGATTAATATAGCA
TCTTCTTTGGAGAGATTAATGAGGAATTTTTTCTGGGAGCAGCACACAAGAAGTAAAATTAACCATTTGGTTAAATGGGCCAAAGTTATCCGAAACCATTTGGTTAAATG
GGCCGCCCCAACTTGTGGAGGTTTGGGCTTGGGAGCATTGCAAAATAAGAACATGGCTCTACTTCCAAGCGGGGCTGGAGGTTTATGA
Protein sequenceShow/hide protein sequence
MVLQAETQKVNWEKSALYGVNVEEDELKNMPGKMGCSAKMMPFLYLGLPLGGYSRQCTFWQPMIEKMQRKIHRWRRFNLSQEGRATLCQSVFANLPTYYMSLFAIPINIA
SSLERLMRNFFWEQHTRSKINHLVKWAKVIRNHLVKWAAPTCGGLGLGALQNKNMALLPSGAGGL